RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Rps28P62858 69 aaKnown RBP9.27□□□□□ -0.93
Scn1b-203ENSMUST00000211945 Gm10643Q3URG9 111 aa9.27□□□□□ -0.93
Scn1b-203ENSMUST00000211945 Krtap4-2B1AQ85 167 aa9.24□□□□□ -0.93
Scn1b-203ENSMUST00000211945 Krtap1-5A2A590 122 aa9.23□□□□□ -0.93
Scn1b-203ENSMUST00000211945 Pet100P0DJE0 76 aa9.15□□□□□ -0.95
Scn1b-203ENSMUST00000211945 Coa5Q99M07 74 aa9.13□□□□□ -0.95
Scn1b-203ENSMUST00000211945 SspoQ8CG65 4998 aa9.1□□□□□ -0.95
Scn1b-203ENSMUST00000211945 Serp1Q9Z1W5 66 aa9.1□□□□□ -0.95
Scn1b-203ENSMUST00000211945 Krtap3-1A2A591 98 aa9.08□□□□□ -0.96
Scn1b-203ENSMUST00000211945 SvipQ3UZP4 77 aa9.05□□□□□ -0.96
Scn1b-203ENSMUST00000211945 Lce1gQ9D195 139 aa9.05□□□□□ -0.96
Scn1b-203ENSMUST00000211945 SnurfQ9WU12 71 aa9.04□□□□□ -0.96
Scn1b-203ENSMUST00000211945 Defb1P56386 69 aa9.03□□□□□ -0.96
Scn1b-203ENSMUST00000211945 Cox6b2Q80ZN9 88 aa9.02□□□□□ -0.97
Scn1b-203ENSMUST00000211945 Brk1Q91VR8 75 aa9□□□□□ -0.97
Scn1b-203ENSMUST00000211945 H2al1aQ5M8Q2 105 aa8.94□□□□□ -0.98
Scn1b-203ENSMUST00000211945 Cdc42se1Q8BHL7 80 aa8.92□□□□□ -0.98
Scn1b-203ENSMUST00000211945 SptssbQ925E8 76 aa8.92□□□□□ -0.98
Scn1b-203ENSMUST00000211945 Syne2Q6ZWQ0 6874 aaKnown RBP8.91□□□□□ -0.98
Scn1b-203ENSMUST00000211945 Gm17606F6ZL36 78 aa8.83□□□□□ -1
Scn1b-203ENSMUST00000211945 Gm10197F6QEY5 67 aa8.76□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm20661K7N787 53 aa8.76□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm20537G3UYK7 97 aa8.75□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm19426M0QWC7 77 aa8.75□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm11555B1AQ89 175 aa8.75□□□□□ -1.01
Scn1b-203ENSMUST00000211945 BC029722A0A0N4SW31 51 aa8.71□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm11596B1AQB0 205 aa8.71□□□□□ -1.01
Scn1b-203ENSMUST00000211945 Gm10382Q3V0T5 144 aa8.69□□□□□ -1.02
Scn1b-203ENSMUST00000211945 Gm10337F7DEP7 55 aa8.66□□□□□ -1.02
Scn1b-203ENSMUST00000211945 Phxr4P15974 95 aa8.66□□□□□ -1.02
Scn1b-203ENSMUST00000211945 Lce1jD3YUU5 139 aa8.63□□□□□ -1.03
Scn1b-203ENSMUST00000211945 Krtap12-1Q9Z287 130 aa8.62□□□□□ -1.03
Scn1b-203ENSMUST00000211945 H2al1bA0A087WP11 105 aa8.59□□□□□ -1.03
Scn1b-203ENSMUST00000211945 H2al1kJ3QP08 105 aa8.59□□□□□ -1.03
Scn1b-203ENSMUST00000211945 H2al1eQ810S6 105 aa8.59□□□□□ -1.03
Scn1b-203ENSMUST00000211945 H2al1mQ9DAD9 105 aa8.59□□□□□ -1.03
Scn1b-203ENSMUST00000211945 B930094E09RikQ8C4T2 136 aa8.59□□□□□ -1.03
Scn1b-203ENSMUST00000211945 Sox16Q62247 57 aa8.58□□□□□ -1.04
Scn1b-203ENSMUST00000211945 Krtap19-2Q925I0 141 aa8.58□□□□□ -1.04
Scn1b-203ENSMUST00000211945 Krtap4-6Q3V4B7 195 aa8.57□□□□□ -1.04
Scn1b-203ENSMUST00000211945 Krtap9-5A2A5X3 358 aa8.54□□□□□ -1.04
Scn1b-203ENSMUST00000211945 Uqcr11Q9CPX8 56 aa8.54□□□□□ -1.04
Scn1b-203ENSMUST00000211945 Muc5bE9Q5I3 4800 aa8.53□□□□□ -1.04
Scn1b-203ENSMUST00000211945 CriptO70333 101 aa8.51□□□□□ -1.05
Scn1b-203ENSMUST00000211945 Ndufb1P0DN34 57 aa8.47□□□□□ -1.05
Scn1b-203ENSMUST00000211945 Krtap19-9aF8WH65 55 aa8.44□□□□□ -1.06
Scn1b-203ENSMUST00000211945 Limd2Q8BGB5 128 aa8.44□□□□□ -1.06
Scn1b-203ENSMUST00000211945 Krtap4-1Q3UUY3 169 aa8.41□□□□□ -1.06
Scn1b-203ENSMUST00000211945 Mdn1A2ANY6 5589 aaKnown RBP8.39□□□□□ -1.07
Scn1b-203ENSMUST00000211945 Sec61gP60060 68 aa8.37□□□□□ -1.07
Scn1b-203ENSMUST00000211945 Prm2P07978 107 aa8.36□□□□□ -1.07
Scn1b-203ENSMUST00000211945 4933415A04RikQ9D443 101 aa8.36□□□□□ -1.07
Scn1b-203ENSMUST00000211945 Spink7Q6IE32 76 aa8.33□□□□□ -1.08
Scn1b-203ENSMUST00000211945 Pla2g10Q9QXX3 151 aa8.31□□□□□ -1.08
Scn1b-203ENSMUST00000211945 Gm9955Q8CEJ8 102 aa8.27□□□□□ -1.09
Scn1b-203ENSMUST00000211945 Gm11564A2A4L9 201 aa8.23□□□□□ -1.09
Scn1b-203ENSMUST00000211945 Gm11563B1AQ90 168 aa8.23□□□□□ -1.09
Scn1b-203ENSMUST00000211945 Gm11595B1AQA7 289 aa8.23□□□□□ -1.09
Scn1b-203ENSMUST00000211945 Krtap4-8B1AQA8 209 aa8.23□□□□□ -1.09
Scn1b-203ENSMUST00000211945 Gm17402F6Z0L5 76 aa8.19□□□□□ -1.1
Scn1b-203ENSMUST00000211945 Gm6358A0A087WPH4 74 aa8.18□□□□□ -1.1
Scn1b-203ENSMUST00000211945 Sprr2a3Q4KL71 83 aa8.17□□□□□ -1.1
Scn1b-203ENSMUST00000211945 Sprr2a1Q9CQK8 83 aa8.17□□□□□ -1.1
Scn1b-203ENSMUST00000211945 Lce1iQ9D6P5 149 aa8.1□□□□□ -1.11
Scn1b-203ENSMUST00000211945 Gm3646F6S692 53 aa7.99□□□□□ -1.13
Scn1b-203ENSMUST00000211945 Krtap4-9B1AQA9 244 aa7.98□□□□□ -1.13
Scn1b-203ENSMUST00000211945 Lce1a2Q9D1K4 149 aa7.98□□□□□ -1.13
Scn1b-203ENSMUST00000211945 Fsip2A2ARZ3 6995 aa7.87□□□□□ -1.15
Scn1b-203ENSMUST00000211945 Ndufs5Q99LY9 106 aa7.86□□□□□ -1.15
Scn1b-203ENSMUST00000211945 Mt4P47945 62 aa7.83□□□□□ -1.16
Scn1b-203ENSMUST00000211945 Mt2P02798 61 aa7.83□□□□□ -1.16
Scn1b-203ENSMUST00000211945 Gm19668J3QMD1 248 aa7.78□□□□□ -1.16
Scn1b-203ENSMUST00000211945 Krtap4-13Q9D7P3 165 aa7.69□□□□□ -1.18
Scn1b-203ENSMUST00000211945 Krtap6-3A0A087WQL6 57 aa7.63□□□□□ -1.19
Scn1b-203ENSMUST00000211945 Krtap9-3Q3V2C1 136 aa7.62□□□□□ -1.19
Scn1b-203ENSMUST00000211945 Gm3880A0A1B0GSB3 72 aa7.6□□□□□ -1.19
Scn1b-203ENSMUST00000211945 Krtap8-1O08633 61 aa7.57□□□□□ -1.2
Scn1b-203ENSMUST00000211945 Gm21887J3QQ04 176 aa7.54□□□□□ -1.2
Scn1b-203ENSMUST00000211945 Sprr2kO70562 68 aa7.48□□□□□ -1.21
Scn1b-203ENSMUST00000211945 Lce1bQ9D149 137 aa7.47□□□□□ -1.21
Scn1b-203ENSMUST00000211945 Krtap22-2J3QNX6 67 aa7.45□□□□□ -1.22
Scn1b-203ENSMUST00000211945 Camk2n1Q6QWF9 78 aa7.45□□□□□ -1.22
Scn1b-203ENSMUST00000211945 Krtap19-9bQ99NG9 58 aa7.42□□□□□ -1.22
Scn1b-203ENSMUST00000211945 Lce1lQ9D1G7 135 aa7.39□□□□□ -1.23
Scn1b-203ENSMUST00000211945 2300003K06RikA2A4M0 262 aa7.37□□□□□ -1.23
Scn1b-203ENSMUST00000211945 Gm38119A0A0A6YX29 146 aa7.36□□□□□ -1.23
Scn1b-203ENSMUST00000211945 Gm12216A0A1W2P827 62 aa7.29□□□□□ -1.24
Scn1b-203ENSMUST00000211945 Krtap4-7Q9D732 168 aa7.27□□□□□ -1.25
Scn1b-203ENSMUST00000211945 Romo1P60603 79 aa7.22□□□□□ -1.25
Scn1b-203ENSMUST00000211945 Lce1a1Q9CQH5 143 aa7.02□□□□□ -1.29
Scn1b-203ENSMUST00000211945 Sprr2gO70558 76 aa6.98□□□□□ -1.29
Scn1b-203ENSMUST00000211945 Krtap20-2E9Q0A8 60 aa6.96□□□□□ -1.3
Scn1b-203ENSMUST00000211945 Lce1hQ9D6R3 140 aa6.93□□□□□ -1.3
Scn1b-203ENSMUST00000211945 Lce1eQ9D139 143 aa6.86□□□□□ -1.31
Scn1b-203ENSMUST00000211945 Krtap7-1Q9D3I6 87 aa6.84□□□□□ -1.31
Scn1b-203ENSMUST00000211945 2310046K23RikA0A0A6YVW6 87 aa6.76□□□□□ -1.33
Scn1b-203ENSMUST00000211945 A0A1Y7VJH8 109 aa6.66□□□□□ -1.34
Scn1b-203ENSMUST00000211945 Gm40193A0A1B0GT39 78 aa6.66□□□□□ -1.34
Scn1b-203ENSMUST00000211945 Lce1dQ9D731 133 aa6.64□□□□□ -1.35
Scn1b-203ENSMUST00000211945 Tnp1P10856 55 aa6.58□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms