RNA–Protein interactions for RNA: ENSMUST00000202179.1

Specc1-213, Transcript of Cytospin-B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Specc1, Length 6,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Specc1-213ENSMUST00000202179 Krtap1-5A2A590 122 aa5.35□□□□□ -1.55
Specc1-213ENSMUST00000202179 Dnah2P0C6F1 4456 aa5.35□□□□□ -1.55
Specc1-213ENSMUST00000202179 Gm10318A0A1W2P728 225 aa5.35□□□□□ -1.55
Specc1-213ENSMUST00000202179 Hspg2Q05793 3707 aaKnown RBP5.33□□□□□ -1.56
Specc1-213ENSMUST00000202179 Dnah7bL7N1Y0 4068 aa5.32□□□□□ -1.56
Specc1-213ENSMUST00000202179 ApobE9Q414 4505 aa5.29□□□□□ -1.56
Specc1-213ENSMUST00000202179 4933428G20RikQ9D3X4 101 aa5.28□□□□□ -1.56
Specc1-213ENSMUST00000202179 Ryr3A2AGL3 4863 aa5.26□□□□□ -1.57
Specc1-213ENSMUST00000202179 Crct1Q6PAI5 102 aa5.26□□□□□ -1.57
Specc1-213ENSMUST00000202179 Lrp1bQ9JI18 4599 aa5.22□□□□□ -1.57
Specc1-213ENSMUST00000202179 SacsQ9JLC8 4582 aa5.22□□□□□ -1.57
Specc1-213ENSMUST00000202179 Ryr2E9Q401 4966 aaKnown RBP5.2□□□□□ -1.58
Specc1-213ENSMUST00000202179 Gm18596A0A1W2P860 280 aa5.17□□□□□ -1.58
Specc1-213ENSMUST00000202179 Dnah8Q91XQ0 4731 aa5.15□□□□□ -1.58
Specc1-213ENSMUST00000202179 Lce1mQ9CR91 182 aa5.14□□□□□ -1.59
Specc1-213ENSMUST00000202179 Gm19402J3QJV4 266 aa5.14□□□□□ -1.59
Specc1-213ENSMUST00000202179 Fat1A0A1L1SQU7 4645 aa5.13□□□□□ -1.59
Specc1-213ENSMUST00000202179 Csmd3Q80T79 3707 aa5.13□□□□□ -1.59
Specc1-213ENSMUST00000202179 Kiaa1109A2AAE1 5005 aa5.1□□□□□ -1.59
Specc1-213ENSMUST00000202179 Herc2Q4U2R1 4836 aa5.1□□□□□ -1.59
Specc1-213ENSMUST00000202179 Hectd4E9Q2E4 4418 aa5.09□□□□□ -1.59
Specc1-213ENSMUST00000202179 Krtap1-4Q3V2D6 188 aa5.08□□□□□ -1.6
Specc1-213ENSMUST00000202179 Fat3Q8BNA6 4555 aa5.07□□□□□ -1.6
Specc1-213ENSMUST00000202179 Mycbp2Q7TPH6 4711 aa5.07□□□□□ -1.6
Specc1-213ENSMUST00000202179 Krtap19-9aF8WH65 55 aa5.04□□□□□ -1.6
Specc1-213ENSMUST00000202179 Fras1Q80T14 4010 aa5.03□□□□□ -1.6
Specc1-213ENSMUST00000202179 Dnah7cA0A087WR13 4024 aa4.97□□□□□ -1.61
Specc1-213ENSMUST00000202179 LorP18165 486 aa4.95□□□□□ -1.62
Specc1-213ENSMUST00000202179 Dnah7aE9Q0T8 4024 aa4.95□□□□□ -1.62
Specc1-213ENSMUST00000202179 Prm1P02319 51 aa4.95□□□□□ -1.62
Specc1-213ENSMUST00000202179 Krtap19-9bQ99NG9 58 aa4.92□□□□□ -1.62
Specc1-213ENSMUST00000202179 Birc6O88738 4882 aa4.91□□□□□ -1.62
Specc1-213ENSMUST00000202179 Lrp1Q91ZX7 4545 aaKnown RBP4.9□□□□□ -1.63
Specc1-213ENSMUST00000202179 Dnhd1D3Z2X2 4750 aa4.89□□□□□ -1.63
Specc1-213ENSMUST00000202179 HydinQ80W93 5154 aa4.88□□□□□ -1.63
Specc1-213ENSMUST00000202179 Fat2Q5F226 4351 aa4.86□□□□□ -1.63
Specc1-213ENSMUST00000202179 Krtap16-3Q8C1I6 86 aa4.84□□□□□ -1.63
Specc1-213ENSMUST00000202179 Krtap12-1Q9Z287 130 aa4.84□□□□□ -1.63
Specc1-213ENSMUST00000202179 Krtap19-3Q925H6 87 aa4.83□□□□□ -1.64
Specc1-213ENSMUST00000202179 Lrp2A2ARV4 4660 aa4.81□□□□□ -1.64
Specc1-213ENSMUST00000202179 Krtap19-1Q925H2 87 aa4.8□□□□□ -1.64
Specc1-213ENSMUST00000202179 Gm7735D3YX18 52 aa4.78□□□□□ -1.64
Specc1-213ENSMUST00000202179 Gm9789Q8BIG3 52 aa4.72□□□□□ -1.65
Specc1-213ENSMUST00000202179 Pkhd1l1Q80ZA4 4249 aa4.69□□□□□ -1.66
Specc1-213ENSMUST00000202179 Krtap8-1O08633 61 aa4.69□□□□□ -1.66
Specc1-213ENSMUST00000202179 Herc1E9PZP8 4859 aa4.64□□□□□ -1.67
Specc1-213ENSMUST00000202179 2310046K23RikA0A0A6YVW6 87 aa4.64□□□□□ -1.67
Specc1-213ENSMUST00000202179 Krtap1-3A2A588 173 aa4.62□□□□□ -1.67
Specc1-213ENSMUST00000202179 Abca13Q5SSE9 5034 aa4.62□□□□□ -1.67
Specc1-213ENSMUST00000202179 Vps13bQ80TY5 3993 aa4.62□□□□□ -1.67
Specc1-213ENSMUST00000202179 Gm6358A0A087WPH4 74 aa4.61□□□□□ -1.67
Specc1-213ENSMUST00000202179 Kmt2cQ8BRH4 4903 aa4.59□□□□□ -1.68
Specc1-213ENSMUST00000202179 Krtap9-5A2A5X3 358 aa4.53□□□□□ -1.68
Specc1-213ENSMUST00000202179 Pkhd1E9PZ36 4059 aa4.52□□□□□ -1.69
Specc1-213ENSMUST00000202179 PcloQ9QYX7 5068 aa4.48□□□□□ -1.69
Specc1-213ENSMUST00000202179 4932415D10RikA0A1W2P6U8 4986 aa4.45□□□□□ -1.7
Specc1-213ENSMUST00000202179 Krtap19-2Q925I0 141 aa4.42□□□□□ -1.7
Specc1-213ENSMUST00000202179 Gm10061D3Z714 54 aa4.38□□□□□ -1.71
Specc1-213ENSMUST00000202179 Lce1jD3YUU5 139 aa4.33□□□□□ -1.72
Specc1-213ENSMUST00000202179 Mt2P02798 61 aa4.28□□□□□ -1.72
Specc1-213ENSMUST00000202179 Fat4Q2PZL6 4981 aa4.28□□□□□ -1.72
Specc1-213ENSMUST00000202179 Ush2AQ2QI47 5193 aa4.28□□□□□ -1.72
Specc1-213ENSMUST00000202179 Gm10272F7CZ33 110 aa4.27□□□□□ -1.73
Specc1-213ENSMUST00000202179 Sprr2kO70562 68 aa4.27□□□□□ -1.73
Specc1-213ENSMUST00000202179 ZanO88799 5376 aa4.27□□□□□ -1.73
Specc1-213ENSMUST00000202179 Gm10100J3QK64 120 aa4.26□□□□□ -1.73
Specc1-213ENSMUST00000202179 Krtap22-2J3QNX6 67 aa4.23□□□□□ -1.73
Specc1-213ENSMUST00000202179 Ubr4A2AN08 5180 aa4.22□□□□□ -1.73
Specc1-213ENSMUST00000202179 Gm11569B1AQB1 180 aa4.2□□□□□ -1.74
Specc1-213ENSMUST00000202179 Lce3bQ9CQM7 98 aa4.2□□□□□ -1.74
Specc1-213ENSMUST00000202179 Gm10142J3KMP7 120 aa4.19□□□□□ -1.74
Specc1-213ENSMUST00000202179 Sprr2gO70558 76 aa4.17□□□□□ -1.74
Specc1-213ENSMUST00000202179 Hmcn2A2AJ76 5100 aa4.12□□□□□ -1.75
Specc1-213ENSMUST00000202179 Lce3cQ91V05 98 aa4.08□□□□□ -1.76
Specc1-213ENSMUST00000202179 Krtap9-3Q3V2C1 136 aa4.08□□□□□ -1.76
Specc1-213ENSMUST00000202179 Mdn1A2ANY6 5589 aaKnown RBP4.07□□□□□ -1.76
Specc1-213ENSMUST00000202179 Rnf213E9Q555 5152 aaKnown RBP4.06□□□□□ -1.76
Specc1-213ENSMUST00000202179 Lce1iQ9D6P5 149 aa4.04□□□□□ -1.76
Specc1-213ENSMUST00000202179 Lce3eF8VQJ0 98 aa4.03□□□□□ -1.76
Specc1-213ENSMUST00000202179 Lce3fQ6PAI4 98 aa4.03□□□□□ -1.76
Specc1-213ENSMUST00000202179 Krtap19-4Q925H7 84 aa4□□□□□ -1.77
Specc1-213ENSMUST00000202179 Lce3dE9Q8V1 98 aa3.99□□□□□ -1.77
Specc1-213ENSMUST00000202179 Lce1a2Q9D1K4 149 aa3.97□□□□□ -1.77
Specc1-213ENSMUST00000202179 Krtap4-2B1AQ85 167 aa3.95□□□□□ -1.78
Specc1-213ENSMUST00000202179 Lce1gQ9D195 139 aa3.92□□□□□ -1.78
Specc1-213ENSMUST00000202179 Muc5bE9Q5I3 4800 aa3.92□□□□□ -1.78
Specc1-213ENSMUST00000202179 Lce3aQ497I5 98 aa3.91□□□□□ -1.78
Specc1-213ENSMUST00000202179 SspoQ8CG65 4998 aa3.89□□□□□ -1.79
Specc1-213ENSMUST00000202179 Gm38119A0A0A6YX29 146 aa3.88□□□□□ -1.79
Specc1-213ENSMUST00000202179 Sprr2dO70555 85 aa3.88□□□□□ -1.79
Specc1-213ENSMUST00000202179 Lce1hQ9D6R3 140 aa3.88□□□□□ -1.79
Specc1-213ENSMUST00000202179 Krtap4-6Q3V4B7 195 aa3.87□□□□□ -1.79
Specc1-213ENSMUST00000202179 Krtap17-1A2A5X6 109 aa3.81□□□□□ -1.8
Specc1-213ENSMUST00000202179 Gm11938Q9D3H4 131 aa3.8□□□□□ -1.8
Specc1-213ENSMUST00000202179 Sprr2iO70560 76 aa3.78□□□□□ -1.8
Specc1-213ENSMUST00000202179 Gm11596B1AQB0 205 aa3.76□□□□□ -1.81
Specc1-213ENSMUST00000202179 Krtap4-1Q3UUY3 169 aa3.76□□□□□ -1.81
Specc1-213ENSMUST00000202179 Mt4P47945 62 aa3.76□□□□□ -1.81
Specc1-213ENSMUST00000202179 Gm10024A0A0A0MQA4 119 aa3.71□□□□□ -1.82
Specc1-213ENSMUST00000202179 Gm11564A2A4L9 201 aa3.69□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms