RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Ush2AQ2QI47 5193 aa7.73□□□□□ -1.17
Cpsf6-207ENSMUST00000176686 Pla2g10Q9QXX3 151 aa7.72□□□□□ -1.17
Cpsf6-207ENSMUST00000176686 Krtap17-1A2A5X6 109 aa7.68□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Gm20537G3UYK7 97 aa7.67□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Ubr4A2AN08 5180 aa7.67□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Gm7735D3YX18 52 aa7.67□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Gm17606F6ZL36 78 aa7.67□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Prm1P02319 51 aa7.65□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Gm9821Q8K076 103 aa7.65□□□□□ -1.18
Cpsf6-207ENSMUST00000176686 Gm9955Q8CEJ8 102 aa7.61□□□□□ -1.19
Cpsf6-207ENSMUST00000176686 Gm17416Q30KP4 66 aa7.59□□□□□ -1.19
Cpsf6-207ENSMUST00000176686 Gm10382Q3V0T5 144 aa7.59□□□□□ -1.19
Cpsf6-207ENSMUST00000176686 Gm3880A0A1B0GSB3 72 aa7.58□□□□□ -1.2
Cpsf6-207ENSMUST00000176686 Hmcn2A2AJ76 5100 aa7.56□□□□□ -1.2
Cpsf6-207ENSMUST00000176686 Gm9789Q8BIG3 52 aa7.52□□□□□ -1.2
Cpsf6-207ENSMUST00000176686 Krtap3-1A2A591 98 aa7.45□□□□□ -1.22
Cpsf6-207ENSMUST00000176686 2210017I01RikA0A0A6YVV1 95 aa7.42□□□□□ -1.22
Cpsf6-207ENSMUST00000176686 Gm12216A0A1W2P827 62 aa7.3□□□□□ -1.24
Cpsf6-207ENSMUST00000176686 Romo1P60603 79 aa7.24□□□□□ -1.25
Cpsf6-207ENSMUST00000176686 Sec61bQ9CQS8 96 aaKnown RBP7.21□□□□□ -1.25
Cpsf6-207ENSMUST00000176686 Krtap13-1Q8K198 168 aa7.21□□□□□ -1.26
Cpsf6-207ENSMUST00000176686 BC029722A0A0N4SW31 51 aa7.19□□□□□ -1.26
Cpsf6-207ENSMUST00000176686 CriptO70333 101 aa7.18□□□□□ -1.26
Cpsf6-207ENSMUST00000176686 2310057N15RikQ9D6T8 200 aa7.16□□□□□ -1.26
Cpsf6-207ENSMUST00000176686 B930094E09RikQ8C4T2 136 aa7.09□□□□□ -1.27
Cpsf6-207ENSMUST00000176686 Gm19426M0QWC7 77 aa7.07□□□□□ -1.28
Cpsf6-207ENSMUST00000176686 Gm11562A0PK51 136 aa7.05□□□□□ -1.28
Cpsf6-207ENSMUST00000176686 Krtap1-5A2A590 122 aa7.05□□□□□ -1.28
Cpsf6-207ENSMUST00000176686 Gm21887J3QQ04 176 aa7□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 Gm17402F6Z0L5 76 aa6.99□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 ZanO88799 5376 aa6.98□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 Fat4Q2PZL6 4981 aa6.98□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 Fam229aB2KGE5 128 aa6.98□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 Krtap16-3Q8C1I6 86 aa6.97□□□□□ -1.29
Cpsf6-207ENSMUST00000176686 Crct1Q6PAI5 102 aa6.91□□□□□ -1.3
Cpsf6-207ENSMUST00000176686 Gm10318A0A1W2P728 225 aa6.89□□□□□ -1.31
Cpsf6-207ENSMUST00000176686 Krtap1-3A2A588 173 aa6.89□□□□□ -1.31
Cpsf6-207ENSMUST00000176686 Krtap19-1Q925H2 87 aa6.89□□□□□ -1.31
Cpsf6-207ENSMUST00000176686 Gm19402J3QJV4 266 aa6.85□□□□□ -1.31
Cpsf6-207ENSMUST00000176686 Krtap19-3Q925H6 87 aa6.83□□□□□ -1.32
Cpsf6-207ENSMUST00000176686 Spink7Q6IE32 76 aa6.82□□□□□ -1.32
Cpsf6-207ENSMUST00000176686 Krtap4-2B1AQ85 167 aa6.81□□□□□ -1.32
Cpsf6-207ENSMUST00000176686 Sprr2a3Q4KL71 83 aa6.78□□□□□ -1.32
Cpsf6-207ENSMUST00000176686 Sprr2a1Q9CQK8 83 aa6.78□□□□□ -1.32
Cpsf6-207ENSMUST00000176686 Mp68P56379 58 aa6.74□□□□□ -1.33
Cpsf6-207ENSMUST00000176686 LorP18165 486 aa6.73□□□□□ -1.33
Cpsf6-207ENSMUST00000176686 Rnf213E9Q555 5152 aaKnown RBP6.69□□□□□ -1.34
Cpsf6-207ENSMUST00000176686 Gm20538F6Z9R1 75 aa6.66□□□□□ -1.34
Cpsf6-207ENSMUST00000176686 Gm11569B1AQB1 180 aa6.65□□□□□ -1.34
Cpsf6-207ENSMUST00000176686 Gm10061D3Z714 54 aa6.65□□□□□ -1.35
Cpsf6-207ENSMUST00000176686 Syne2Q6ZWQ0 6874 aaKnown RBP6.62□□□□□ -1.35
Cpsf6-207ENSMUST00000176686 Lce1gQ9D195 139 aa6.62□□□□□ -1.35
Cpsf6-207ENSMUST00000176686 Krtap7-1Q9D3I6 87 aa6.62□□□□□ -1.35
Cpsf6-207ENSMUST00000176686 Krtap1-4Q3V2D6 188 aa6.61□□□□□ -1.35
Cpsf6-207ENSMUST00000176686 Gm40193A0A1B0GT39 78 aa6.57□□□□□ -1.36
Cpsf6-207ENSMUST00000176686 Camk2n1Q6QWF9 78 aa6.52□□□□□ -1.37
Cpsf6-207ENSMUST00000176686 Lce1jD3YUU5 139 aa6.44□□□□□ -1.38
Cpsf6-207ENSMUST00000176686 Gm19668J3QMD1 248 aa6.4□□□□□ -1.39
Cpsf6-207ENSMUST00000176686 Prm2P07978 107 aa6.4□□□□□ -1.39
Cpsf6-207ENSMUST00000176686 SspoQ8CG65 4998 aa6.38□□□□□ -1.39
Cpsf6-207ENSMUST00000176686 Gm11596B1AQB0 205 aa6.35□□□□□ -1.39
Cpsf6-207ENSMUST00000176686 Krtap12-1Q9Z287 130 aa6.33□□□□□ -1.4
Cpsf6-207ENSMUST00000176686 Gm11555B1AQ89 175 aa6.32□□□□□ -1.4
Cpsf6-207ENSMUST00000176686 Krtap19-9aF8WH65 55 aa6.31□□□□□ -1.4
Cpsf6-207ENSMUST00000176686 Ndufaf8A2AMZ4 74 aa6.29□□□□□ -1.4
Cpsf6-207ENSMUST00000176686 Muc5bE9Q5I3 4800 aa6.26□□□□□ -1.41
Cpsf6-207ENSMUST00000176686 Krtap4-6Q3V4B7 195 aa6.19□□□□□ -1.42
Cpsf6-207ENSMUST00000176686 Mdn1A2ANY6 5589 aaKnown RBP6.17□□□□□ -1.42
Cpsf6-207ENSMUST00000176686 Tnp1P10856 55 aa6.09□□□□□ -1.43
Cpsf6-207ENSMUST00000176686 Krtap4-1Q3UUY3 169 aa6.07□□□□□ -1.44
Cpsf6-207ENSMUST00000176686 Lce1iQ9D6P5 149 aa6.03□□□□□ -1.44
Cpsf6-207ENSMUST00000176686 Krtap19-2Q925I0 141 aa6.03□□□□□ -1.44
Cpsf6-207ENSMUST00000176686 Krtap8-1O08633 61 aa5.99□□□□□ -1.45
Cpsf6-207ENSMUST00000176686 Lce1a2Q9D1K4 149 aa5.99□□□□□ -1.45
Cpsf6-207ENSMUST00000176686 Krtap9-5A2A5X3 358 aa5.98□□□□□ -1.45
Cpsf6-207ENSMUST00000176686 Gm11564A2A4L9 201 aa5.95□□□□□ -1.46
Cpsf6-207ENSMUST00000176686 Gm11563B1AQ90 168 aa5.95□□□□□ -1.46
Cpsf6-207ENSMUST00000176686 Gm11595B1AQA7 289 aa5.95□□□□□ -1.46
Cpsf6-207ENSMUST00000176686 Krtap4-8B1AQA8 209 aa5.95□□□□□ -1.46
Cpsf6-207ENSMUST00000176686 Krtap19-9bQ99NG9 58 aa5.91□□□□□ -1.46
Cpsf6-207ENSMUST00000176686 Fsip2A2ARZ3 6995 aa5.83□□□□□ -1.48
Cpsf6-207ENSMUST00000176686 Krtap4-9B1AQA9 244 aa5.76□□□□□ -1.49
Cpsf6-207ENSMUST00000176686 2310046K23RikA0A0A6YVW6 87 aa5.74□□□□□ -1.49
Cpsf6-207ENSMUST00000176686 Krtap9-3Q3V2C1 136 aa5.73□□□□□ -1.49
Cpsf6-207ENSMUST00000176686 Gm6358A0A087WPH4 74 aa5.67□□□□□ -1.5
Cpsf6-207ENSMUST00000176686 Lce1hQ9D6R3 140 aa5.66□□□□□ -1.5
Cpsf6-207ENSMUST00000176686 Mt4P47945 62 aa5.63□□□□□ -1.51
Cpsf6-207ENSMUST00000176686 Gm9112A2AI92 75 aa5.62□□□□□ -1.51
Cpsf6-207ENSMUST00000176686 Mt2P02798 61 aa5.62□□□□□ -1.51
Cpsf6-207ENSMUST00000176686 Krtap4-13Q9D7P3 165 aa5.58□□□□□ -1.52
Cpsf6-207ENSMUST00000176686 Krtap6-3A0A087WQL6 57 aa5.55□□□□□ -1.52
Cpsf6-207ENSMUST00000176686 A0A1Y7VJH8 109 aa5.5□□□□□ -1.53
Cpsf6-207ENSMUST00000176686 Lce1lQ9D1G7 135 aa5.38□□□□□ -1.55
Cpsf6-207ENSMUST00000176686 Sprr2kO70562 68 aa5.33□□□□□ -1.56
Cpsf6-207ENSMUST00000176686 Krtap28-10A0A1Y7VP58 119 aa5.28□□□□□ -1.56
Cpsf6-207ENSMUST00000176686 Krtap22-2J3QNX6 67 aa5.27□□□□□ -1.57
Cpsf6-207ENSMUST00000176686 Lce1bQ9D149 137 aa5.27□□□□□ -1.57
Cpsf6-207ENSMUST00000176686 2300003K06RikA2A4M0 262 aa5.26□□□□□ -1.57
Cpsf6-207ENSMUST00000176686 Lce1dQ9D731 133 aa5.23□□□□□ -1.57
Cpsf6-207ENSMUST00000176686 Gm38119A0A0A6YX29 146 aa5.22□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms