RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Ryr3A2AGL3 4863 aa4.1□□□□□ -1.75
Lig3-211ENSMUST00000173722 Krtap13-1Q8K198 168 aa4.08□□□□□ -1.76
Lig3-211ENSMUST00000173722 Dnah9B1AR51 4484 aa4.07□□□□□ -1.76
Lig3-211ENSMUST00000173722 Dnah11E9Q7N9 4488 aa4.06□□□□□ -1.76
Lig3-211ENSMUST00000173722 Pkd1O08852 4293 aa4.03□□□□□ -1.76
Lig3-211ENSMUST00000173722 Krtap7-1Q9D3I6 87 aa4.02□□□□□ -1.77
Lig3-211ENSMUST00000173722 Dnah7bL7N1Y0 4068 aa4.01□□□□□ -1.77
Lig3-211ENSMUST00000173722 ApobE9Q414 4505 aa4.01□□□□□ -1.77
Lig3-211ENSMUST00000173722 Kmt2aP55200 3966 aa4.01□□□□□ -1.77
Lig3-211ENSMUST00000173722 Ryr2E9Q401 4966 aaKnown RBP4.01□□□□□ -1.77
Lig3-211ENSMUST00000173722 Krtap3-1A2A591 98 aa3.98□□□□□ -1.77
Lig3-211ENSMUST00000173722 Herc2Q4U2R1 4836 aa3.96□□□□□ -1.78
Lig3-211ENSMUST00000173722 Dnah3Q8BW94 4083 aa3.96□□□□□ -1.78
Lig3-211ENSMUST00000173722 Dnah2P0C6F1 4456 aa3.95□□□□□ -1.78
Lig3-211ENSMUST00000173722 Dnah1E9Q8T7 4250 aa3.95□□□□□ -1.78
Lig3-211ENSMUST00000173722 Csmd3Q80T79 3707 aa3.94□□□□□ -1.78
Lig3-211ENSMUST00000173722 LorP18165 486 aa3.94□□□□□ -1.78
Lig3-211ENSMUST00000173722 Mycbp2Q7TPH6 4711 aa3.94□□□□□ -1.78
Lig3-211ENSMUST00000173722 Dnah8Q91XQ0 4731 aa3.91□□□□□ -1.78
Lig3-211ENSMUST00000173722 Kiaa1109A2AAE1 5005 aa3.91□□□□□ -1.78
Lig3-211ENSMUST00000173722 Fat1A0A1L1SQU7 4645 aa3.89□□□□□ -1.79
Lig3-211ENSMUST00000173722 Prm1P02319 51 aa3.89□□□□□ -1.79
Lig3-211ENSMUST00000173722 Lrp1bQ9JI18 4599 aa3.87□□□□□ -1.79
Lig3-211ENSMUST00000173722 SacsQ9JLC8 4582 aa3.87□□□□□ -1.79
Lig3-211ENSMUST00000173722 Fat3Q8BNA6 4555 aa3.86□□□□□ -1.79
Lig3-211ENSMUST00000173722 Fras1Q80T14 4010 aa3.82□□□□□ -1.8
Lig3-211ENSMUST00000173722 2310046K23RikA0A0A6YVW6 87 aa3.82□□□□□ -1.8
Lig3-211ENSMUST00000173722 Gm7735D3YX18 52 aa3.8□□□□□ -1.8
Lig3-211ENSMUST00000173722 Krtap19-9aF8WH65 55 aa3.8□□□□□ -1.8
Lig3-211ENSMUST00000173722 Dnah7cA0A087WR13 4024 aa3.77□□□□□ -1.81
Lig3-211ENSMUST00000173722 Dnah7aE9Q0T8 4024 aa3.77□□□□□ -1.81
Lig3-211ENSMUST00000173722 Birc6O88738 4882 aa3.77□□□□□ -1.81
Lig3-211ENSMUST00000173722 HydinQ80W93 5154 aa3.76□□□□□ -1.81
Lig3-211ENSMUST00000173722 Lrp1Q91ZX7 4545 aaKnown RBP3.76□□□□□ -1.81
Lig3-211ENSMUST00000173722 Lrp2A2ARV4 4660 aa3.76□□□□□ -1.81
Lig3-211ENSMUST00000173722 Krtap19-9bQ99NG9 58 aa3.73□□□□□ -1.81
Lig3-211ENSMUST00000173722 Hectd4E9Q2E4 4418 aa3.73□□□□□ -1.81
Lig3-211ENSMUST00000173722 Sprr2a3Q4KL71 83 aa3.72□□□□□ -1.81
Lig3-211ENSMUST00000173722 Sprr2a1Q9CQK8 83 aa3.72□□□□□ -1.81
Lig3-211ENSMUST00000173722 Gm9789Q8BIG3 52 aa3.71□□□□□ -1.81
Lig3-211ENSMUST00000173722 Lce3bQ9CQM7 98 aa3.71□□□□□ -1.82
Lig3-211ENSMUST00000173722 Sprr2fO70557 76 aa3.7□□□□□ -1.82
Lig3-211ENSMUST00000173722 Dnhd1D3Z2X2 4750 aa3.69□□□□□ -1.82
Lig3-211ENSMUST00000173722 Krtap1-5A2A590 122 aa3.69□□□□□ -1.82
Lig3-211ENSMUST00000173722 Lce3cQ91V05 98 aa3.67□□□□□ -1.82
Lig3-211ENSMUST00000173722 Krtap12-1Q9Z287 130 aa3.65□□□□□ -1.82
Lig3-211ENSMUST00000173722 Fat2Q5F226 4351 aa3.62□□□□□ -1.83
Lig3-211ENSMUST00000173722 Krtap19-3Q925H6 87 aa3.61□□□□□ -1.83
Lig3-211ENSMUST00000173722 Krtap1-4Q3V2D6 188 aa3.6□□□□□ -1.83
Lig3-211ENSMUST00000173722 Krtap16-3Q8C1I6 86 aa3.6□□□□□ -1.83
Lig3-211ENSMUST00000173722 Krtap1-3A2A588 173 aa3.59□□□□□ -1.83
Lig3-211ENSMUST00000173722 Abca13Q5SSE9 5034 aa3.56□□□□□ -1.84
Lig3-211ENSMUST00000173722 Herc1E9PZP8 4859 aa3.56□□□□□ -1.84
Lig3-211ENSMUST00000173722 Kmt2cQ8BRH4 4903 aa3.56□□□□□ -1.84
Lig3-211ENSMUST00000173722 4932415D10RikA0A1W2P6U8 4986 aa3.55□□□□□ -1.84
Lig3-211ENSMUST00000173722 Krtap19-1Q925H2 87 aa3.55□□□□□ -1.84
Lig3-211ENSMUST00000173722 Sprr2iO70560 76 aa3.54□□□□□ -1.84
Lig3-211ENSMUST00000173722 PcloQ9QYX7 5068 aa3.53□□□□□ -1.84
Lig3-211ENSMUST00000173722 Vps13bQ80TY5 3993 aa3.52□□□□□ -1.85
Lig3-211ENSMUST00000173722 Lce3dE9Q8V1 98 aa3.51□□□□□ -1.85
Lig3-211ENSMUST00000173722 Lce3eF8VQJ0 98 aa3.51□□□□□ -1.85
Lig3-211ENSMUST00000173722 Lce3fQ6PAI4 98 aa3.51□□□□□ -1.85
Lig3-211ENSMUST00000173722 Pkhd1l1Q80ZA4 4249 aa3.5□□□□□ -1.85
Lig3-211ENSMUST00000173722 Gm10100J3QK64 120 aa3.5□□□□□ -1.85
Lig3-211ENSMUST00000173722 Pkhd1E9PZ36 4059 aa3.49□□□□□ -1.85
Lig3-211ENSMUST00000173722 Krtap9-5A2A5X3 358 aa3.49□□□□□ -1.85
Lig3-211ENSMUST00000173722 Sprr2eO70556 76 aa3.49□□□□□ -1.85
Lig3-211ENSMUST00000173722 Gm10061D3Z714 54 aa3.46□□□□□ -1.86
Lig3-211ENSMUST00000173722 Lce3aQ497I5 98 aa3.44□□□□□ -1.86
Lig3-211ENSMUST00000173722 Gm38119A0A0A6YX29 146 aa3.44□□□□□ -1.86
Lig3-211ENSMUST00000173722 Gm11569B1AQB1 180 aa3.44□□□□□ -1.86
Lig3-211ENSMUST00000173722 Lce1jD3YUU5 139 aa3.43□□□□□ -1.86
Lig3-211ENSMUST00000173722 Lce1gQ9D195 139 aa3.43□□□□□ -1.86
Lig3-211ENSMUST00000173722 Lce1iQ9D6P5 149 aa3.43□□□□□ -1.86
Lig3-211ENSMUST00000173722 Lce1hQ9D6R3 140 aa3.43□□□□□ -1.86
Lig3-211ENSMUST00000173722 Gm10142J3KMP7 120 aa3.4□□□□□ -1.86
Lig3-211ENSMUST00000173722 Krtap31-2Q8CAY5 177 aa3.4□□□□□ -1.86
Lig3-211ENSMUST00000173722 Krtap4-2B1AQ85 167 aa3.39□□□□□ -1.87
Lig3-211ENSMUST00000173722 Gm10272F7CZ33 110 aa3.39□□□□□ -1.87
Lig3-211ENSMUST00000173722 Gm10024A0A0A0MQA4 119 aa3.38□□□□□ -1.87
Lig3-211ENSMUST00000173722 Ush2AQ2QI47 5193 aa3.36□□□□□ -1.87
Lig3-211ENSMUST00000173722 Ubr4A2AN08 5180 aa3.33□□□□□ -1.88
Lig3-211ENSMUST00000173722 Krtap19-2Q925I0 141 aa3.32□□□□□ -1.88
Lig3-211ENSMUST00000173722 Fat4Q2PZL6 4981 aa3.31□□□□□ -1.88
Lig3-211ENSMUST00000173722 ZanO88799 5376 aa3.3□□□□□ -1.88
Lig3-211ENSMUST00000173722 Lce1fB9EJP6 147 aa3.3□□□□□ -1.88
Lig3-211ENSMUST00000173722 Lce1cQ9D1C5 147 aa3.3□□□□□ -1.88
Lig3-211ENSMUST00000173722 Lce1lQ9D1G7 135 aa3.3□□□□□ -1.88
Lig3-211ENSMUST00000173722 Lce1dQ9D731 133 aa3.3□□□□□ -1.88
Lig3-211ENSMUST00000173722 Lce1bQ9D149 137 aa3.26□□□□□ -1.89
Lig3-211ENSMUST00000173722 Mdn1A2ANY6 5589 aaKnown RBP3.25□□□□□ -1.89
Lig3-211ENSMUST00000173722 Krtap22-2J3QNX6 67 aa3.23□□□□□ -1.89
Lig3-211ENSMUST00000173722 Krtap4-6Q3V4B7 195 aa3.23□□□□□ -1.89
Lig3-211ENSMUST00000173722 Mt2P02798 61 aa3.22□□□□□ -1.89
Lig3-211ENSMUST00000173722 Lce1eQ9D139 143 aa3.21□□□□□ -1.9
Lig3-211ENSMUST00000173722 Gm11596B1AQB0 205 aa3.17□□□□□ -1.9
Lig3-211ENSMUST00000173722 Krtap31-1Q9D644 177 aa3.17□□□□□ -1.9
Lig3-211ENSMUST00000173722 Hmcn2A2AJ76 5100 aa3.16□□□□□ -1.9
Lig3-211ENSMUST00000173722 Rnf213E9Q555 5152 aaKnown RBP3.16□□□□□ -1.9
Lig3-211ENSMUST00000173722 Krtap19-4Q925H7 84 aa3.16□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 92.3 ms