RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 PcloQ9QYX7 5068 aa5.48□□□□□ -1.53
Lig3-210ENSMUST00000173347 2310057N15RikQ9D6T8 200 aa5.45□□□□□ -1.54
Lig3-210ENSMUST00000173347 2210017I01RikA0A0A6YVV1 95 aa5.44□□□□□ -1.54
Lig3-210ENSMUST00000173347 Gm10382Q3V0T5 144 aa5.42□□□□□ -1.54
Lig3-210ENSMUST00000173347 Pla2g10Q9QXX3 151 aa5.39□□□□□ -1.55
Lig3-210ENSMUST00000173347 Krtap3-1A2A591 98 aa5.39□□□□□ -1.55
Lig3-210ENSMUST00000173347 Lce1mQ9CR91 182 aa5.37□□□□□ -1.55
Lig3-210ENSMUST00000173347 Gm9955Q8CEJ8 102 aa5.37□□□□□ -1.55
Lig3-210ENSMUST00000173347 Krtap13-1Q8K198 168 aa5.34□□□□□ -1.56
Lig3-210ENSMUST00000173347 Herc1E9PZP8 4859 aa5.34□□□□□ -1.56
Lig3-210ENSMUST00000173347 Gm20537G3UYK7 97 aa5.32□□□□□ -1.56
Lig3-210ENSMUST00000173347 Mp68P56379 58 aa5.32□□□□□ -1.56
Lig3-210ENSMUST00000173347 Gm3880A0A1B0GSB3 72 aa5.31□□□□□ -1.56
Lig3-210ENSMUST00000173347 Fam229aB2KGE5 128 aa5.31□□□□□ -1.56
Lig3-210ENSMUST00000173347 Gm20538F6Z9R1 75 aa5.3□□□□□ -1.56
Lig3-210ENSMUST00000173347 CriptO70333 101 aa5.29□□□□□ -1.56
Lig3-210ENSMUST00000173347 Romo1P60603 79 aa5.25□□□□□ -1.57
Lig3-210ENSMUST00000173347 BC029722A0A0N4SW31 51 aa5.25□□□□□ -1.57
Lig3-210ENSMUST00000173347 Krtap1-5A2A590 122 aa5.23□□□□□ -1.57
Lig3-210ENSMUST00000173347 Krtap16-3Q8C1I6 86 aa5.22□□□□□ -1.57
Lig3-210ENSMUST00000173347 Prm2P07978 107 aa5.21□□□□□ -1.57
Lig3-210ENSMUST00000173347 Crct1Q6PAI5 102 aa5.21□□□□□ -1.58
Lig3-210ENSMUST00000173347 Krtap19-1Q925H2 87 aa5.17□□□□□ -1.58
Lig3-210ENSMUST00000173347 Gm10318A0A1W2P728 225 aa5.15□□□□□ -1.58
Lig3-210ENSMUST00000173347 Gm18596A0A1W2P860 280 aa5.14□□□□□ -1.59
Lig3-210ENSMUST00000173347 Krtap19-3Q925H6 87 aa5.14□□□□□ -1.59
Lig3-210ENSMUST00000173347 Ush2AQ2QI47 5193 aa5.14□□□□□ -1.59
Lig3-210ENSMUST00000173347 Gm19426M0QWC7 77 aa5.1□□□□□ -1.59
Lig3-210ENSMUST00000173347 Hmcn2A2AJ76 5100 aa5.09□□□□□ -1.59
Lig3-210ENSMUST00000173347 Gm9789Q8BIG3 52 aa5.06□□□□□ -1.6
Lig3-210ENSMUST00000173347 Gm19402J3QJV4 266 aa5.05□□□□□ -1.6
Lig3-210ENSMUST00000173347 Prm1P02319 51 aa5.05□□□□□ -1.6
Lig3-210ENSMUST00000173347 Ubr4A2AN08 5180 aa5.03□□□□□ -1.6
Lig3-210ENSMUST00000173347 Krtap1-3A2A588 173 aa5.03□□□□□ -1.6
Lig3-210ENSMUST00000173347 B930094E09RikQ8C4T2 136 aa5.03□□□□□ -1.6
Lig3-210ENSMUST00000173347 Gm17402F6Z0L5 76 aa5.02□□□□□ -1.61
Lig3-210ENSMUST00000173347 Spink7Q6IE32 76 aa5.02□□□□□ -1.61
Lig3-210ENSMUST00000173347 Gm7735D3YX18 52 aa5□□□□□ -1.61
Lig3-210ENSMUST00000173347 4932415D10RikA0A1W2P6U8 4986 aa5□□□□□ -1.61
Lig3-210ENSMUST00000173347 ZanO88799 5376 aa4.99□□□□□ -1.61
Lig3-210ENSMUST00000173347 Gm21887J3QQ04 176 aa4.96□□□□□ -1.62
Lig3-210ENSMUST00000173347 LorP18165 486 aa4.94□□□□□ -1.62
Lig3-210ENSMUST00000173347 Krtap1-4Q3V2D6 188 aa4.93□□□□□ -1.62
Lig3-210ENSMUST00000173347 Ndufaf8A2AMZ4 74 aa4.93□□□□□ -1.62
Lig3-210ENSMUST00000173347 Sprr2a3Q4KL71 83 aa4.9□□□□□ -1.63
Lig3-210ENSMUST00000173347 Sprr2a1Q9CQK8 83 aa4.9□□□□□ -1.63
Lig3-210ENSMUST00000173347 Fat4Q2PZL6 4981 aa4.85□□□□□ -1.63
Lig3-210ENSMUST00000173347 Rnf213E9Q555 5152 aaKnown RBP4.83□□□□□ -1.64
Lig3-210ENSMUST00000173347 Krtap12-1Q9Z287 130 aa4.77□□□□□ -1.65
Lig3-210ENSMUST00000173347 Lce1jD3YUU5 139 aa4.74□□□□□ -1.65
Lig3-210ENSMUST00000173347 Krtap19-9aF8WH65 55 aa4.73□□□□□ -1.65
Lig3-210ENSMUST00000173347 Camk2n1Q6QWF9 78 aa4.69□□□□□ -1.66
Lig3-210ENSMUST00000173347 Gm19668J3QMD1 248 aa4.65□□□□□ -1.66
Lig3-210ENSMUST00000173347 SspoQ8CG65 4998 aa4.65□□□□□ -1.67
Lig3-210ENSMUST00000173347 Krtap7-1Q9D3I6 87 aa4.64□□□□□ -1.67
Lig3-210ENSMUST00000173347 Gm9112A2AI92 75 aa4.61□□□□□ -1.67
Lig3-210ENSMUST00000173347 Krtap19-2Q925I0 141 aa4.58□□□□□ -1.68
Lig3-210ENSMUST00000173347 Krtap9-5A2A5X3 358 aa4.55□□□□□ -1.68
Lig3-210ENSMUST00000173347 Gm10061D3Z714 54 aa4.55□□□□□ -1.68
Lig3-210ENSMUST00000173347 Krtap17-1A2A5X6 109 aa4.53□□□□□ -1.68
Lig3-210ENSMUST00000173347 Gm40193A0A1B0GT39 78 aa4.5□□□□□ -1.69
Lig3-210ENSMUST00000173347 Lce1iQ9D6P5 149 aa4.45□□□□□ -1.7
Lig3-210ENSMUST00000173347 Lce1a2Q9D1K4 149 aa4.39□□□□□ -1.71
Lig3-210ENSMUST00000173347 Krtap8-1O08633 61 aa4.37□□□□□ -1.71
Lig3-210ENSMUST00000173347 Muc5bE9Q5I3 4800 aa4.36□□□□□ -1.71
Lig3-210ENSMUST00000173347 Krtap19-9bQ99NG9 58 aa4.34□□□□□ -1.71
Lig3-210ENSMUST00000173347 Gm6358A0A087WPH4 74 aa4.32□□□□□ -1.72
Lig3-210ENSMUST00000173347 Gm11569B1AQB1 180 aa4.3□□□□□ -1.72
Lig3-210ENSMUST00000173347 Tnp1P10856 55 aa4.3□□□□□ -1.72
Lig3-210ENSMUST00000173347 Mt2P02798 61 aa4.26□□□□□ -1.73
Lig3-210ENSMUST00000173347 Mdn1A2ANY6 5589 aaKnown RBP4.1□□□□□ -1.75
Lig3-210ENSMUST00000173347 Krtap9-3Q3V2C1 136 aa4.06□□□□□ -1.76
Lig3-210ENSMUST00000173347 Krtap22-2J3QNX6 67 aa4.03□□□□□ -1.76
Lig3-210ENSMUST00000173347 2310046K23RikA0A0A6YVW6 87 aa4.03□□□□□ -1.76
Lig3-210ENSMUST00000173347 Lce1hQ9D6R3 140 aa4.03□□□□□ -1.76
Lig3-210ENSMUST00000173347 Krtap4-6Q3V4B7 195 aa3.92□□□□□ -1.78
Lig3-210ENSMUST00000173347 Lce1gQ9D195 139 aa3.9□□□□□ -1.78
Lig3-210ENSMUST00000173347 Gm11555B1AQ89 175 aa3.9□□□□□ -1.79
Lig3-210ENSMUST00000173347 Krtap4-2B1AQ85 167 aa3.88□□□□□ -1.79
Lig3-210ENSMUST00000173347 Krtap4-1Q3UUY3 169 aa3.83□□□□□ -1.8
Lig3-210ENSMUST00000173347 Gm11596B1AQB0 205 aa3.8□□□□□ -1.8
Lig3-210ENSMUST00000173347 Gm10272F7CZ33 110 aa3.78□□□□□ -1.8
Lig3-210ENSMUST00000173347 Syne2Q6ZWQ0 6874 aaKnown RBP3.76□□□□□ -1.81
Lig3-210ENSMUST00000173347 Gm11564A2A4L9 201 aa3.72□□□□□ -1.81
Lig3-210ENSMUST00000173347 Gm11563B1AQ90 168 aa3.72□□□□□ -1.81
Lig3-210ENSMUST00000173347 Gm11595B1AQA7 289 aa3.72□□□□□ -1.81
Lig3-210ENSMUST00000173347 Krtap4-8B1AQA8 209 aa3.72□□□□□ -1.81
Lig3-210ENSMUST00000173347 Gm11562A0PK51 136 aa3.66□□□□□ -1.82
Lig3-210ENSMUST00000173347 Mt4P47945 62 aa3.66□□□□□ -1.82
Lig3-210ENSMUST00000173347 Krtap4-9B1AQA9 244 aa3.63□□□□□ -1.83
Lig3-210ENSMUST00000173347 Sprr2gO70558 76 aa3.62□□□□□ -1.83
Lig3-210ENSMUST00000173347 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Lig3-210ENSMUST00000173347 Fsip2A2ARZ3 6995 aa3.6□□□□□ -1.83
Lig3-210ENSMUST00000173347 Gm38119A0A0A6YX29 146 aa3.6□□□□□ -1.83
Lig3-210ENSMUST00000173347 Lce1bQ9D149 137 aa3.6□□□□□ -1.83
Lig3-210ENSMUST00000173347 Sprr2dO70555 85 aa3.58□□□□□ -1.84
Lig3-210ENSMUST00000173347 Lce1dQ9D731 133 aa3.58□□□□□ -1.84
Lig3-210ENSMUST00000173347 Lce3bQ9CQM7 98 aa3.55□□□□□ -1.84
Lig3-210ENSMUST00000173347 Syne1Q6ZWR6 8799 aa3.54□□□□□ -1.84
Lig3-210ENSMUST00000173347 4933428G20RikQ9D3X4 101 aa3.53□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms