RNA–Protein interactions for RNA: ENSMUST00000170873.9

Vps50-203, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 3,687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-203ENSMUST00000170873 Gm11563B1AQ90 168 aa3.44□□□□□ -1.86
Vps50-203ENSMUST00000170873 Krtap4-7Q9D732 168 aa3.44□□□□□ -1.86
Vps50-203ENSMUST00000170873 Dnhd1D3Z2X2 4750 aa3.43□□□□□ -1.86
Vps50-203ENSMUST00000170873 Defb1P56386 69 aa3.41□□□□□ -1.86
Vps50-203ENSMUST00000170873 Gm20537G3UYK7 97 aa3.39□□□□□ -1.87
Vps50-203ENSMUST00000170873 RetnlbQ99P86 105 aa3.39□□□□□ -1.87
Vps50-203ENSMUST00000170873 Gm17416Q30KP4 66 aa3.39□□□□□ -1.87
Vps50-203ENSMUST00000170873 Abca13Q5SSE9 5034 aa3.38□□□□□ -1.87
Vps50-203ENSMUST00000170873 Rpl37Q9D823 97 aa3.37□□□□□ -1.87
Vps50-203ENSMUST00000170873 Sec61bQ9CQS8 96 aaKnown RBP3.33□□□□□ -1.88
Vps50-203ENSMUST00000170873 Krtap3-1A2A591 98 aa3.32□□□□□ -1.88
Vps50-203ENSMUST00000170873 Romo1P60603 79 aa3.31□□□□□ -1.88
Vps50-203ENSMUST00000170873 Gm6217A0A1Y7VJK9 128 aa3.31□□□□□ -1.88
Vps50-203ENSMUST00000170873 Gm9736A0A1W2P7N1 277 aa3.3□□□□□ -1.88
Vps50-203ENSMUST00000170873 Gm9955Q8CEJ8 102 aa3.3□□□□□ -1.88
Vps50-203ENSMUST00000170873 Rnase13Q5GAM7 153 aa3.29□□□□□ -1.88
Vps50-203ENSMUST00000170873 2210017I01RikA0A0A6YVV1 95 aa3.28□□□□□ -1.88
Vps50-203ENSMUST00000170873 Krtap4-2B1AQ85 167 aa3.28□□□□□ -1.88
Vps50-203ENSMUST00000170873 Birc6O88738 4882 aa3.28□□□□□ -1.88
Vps50-203ENSMUST00000170873 Gm5965D3Z724 196 aa3.28□□□□□ -1.89
Vps50-203ENSMUST00000170873 Ndufaf8A2AMZ4 74 aa3.27□□□□□ -1.89
Vps50-203ENSMUST00000170873 CriptO70333 101 aa3.27□□□□□ -1.89
Vps50-203ENSMUST00000170873 Gm10382Q3V0T5 144 aa3.26□□□□□ -1.89
Vps50-203ENSMUST00000170873 Krtap15-1Q9QZU5 150 aa3.23□□□□□ -1.89
Vps50-203ENSMUST00000170873 Gm17606F6ZL36 78 aa3.21□□□□□ -1.9
Vps50-203ENSMUST00000170873 Gm3880A0A1B0GSB3 72 aa3.2□□□□□ -1.9
Vps50-203ENSMUST00000170873 Lrp2A2ARV4 4660 aa3.19□□□□□ -1.9
Vps50-203ENSMUST00000170873 Gm9112A2AI92 75 aa3.18□□□□□ -1.9
Vps50-203ENSMUST00000170873 A0A286YCP9 139 aa3.18□□□□□ -1.9
Vps50-203ENSMUST00000170873 Herc2Q4U2R1 4836 aa3.18□□□□□ -1.9
Vps50-203ENSMUST00000170873 Krtap1-5A2A590 122 aa3.17□□□□□ -1.9
Vps50-203ENSMUST00000170873 Kiaa1109A2AAE1 5005 aa3.16□□□□□ -1.9
Vps50-203ENSMUST00000170873 Gm17402F6Z0L5 76 aa3.16□□□□□ -1.9
Vps50-203ENSMUST00000170873 Krtap13-1Q8K198 168 aa3.14□□□□□ -1.91
Vps50-203ENSMUST00000170873 HydinQ80W93 5154 aa3.12□□□□□ -1.91
Vps50-203ENSMUST00000170873 B930094E09RikQ8C4T2 136 aa3.11□□□□□ -1.91
Vps50-203ENSMUST00000170873 PcloQ9QYX7 5068 aa3.1□□□□□ -1.91
Vps50-203ENSMUST00000170873 BC029722A0A0N4SW31 51 aa3.07□□□□□ -1.92
Vps50-203ENSMUST00000170873 Krtap16-3Q8C1I6 86 aa3.06□□□□□ -1.92
Vps50-203ENSMUST00000170873 Sprr2a3Q4KL71 83 aa3.05□□□□□ -1.92
Vps50-203ENSMUST00000170873 Sprr2a1Q9CQK8 83 aa3.05□□□□□ -1.92
Vps50-203ENSMUST00000170873 Gm19426M0QWC7 77 aa3.04□□□□□ -1.92
Vps50-203ENSMUST00000170873 2310057N15RikQ9D6T8 200 aa3.04□□□□□ -1.92
Vps50-203ENSMUST00000170873 Krtap19-1Q925H2 87 aa3.03□□□□□ -1.92
Vps50-203ENSMUST00000170873 Lce1mQ9CR91 182 aa3.02□□□□□ -1.93
Vps50-203ENSMUST00000170873 Herc1E9PZP8 4859 aa3.02□□□□□ -1.93
Vps50-203ENSMUST00000170873 Krtap7-1Q9D3I6 87 aa2.99□□□□□ -1.93
Vps50-203ENSMUST00000170873 Krtap19-3Q925H6 87 aa2.98□□□□□ -1.93
Vps50-203ENSMUST00000170873 Gm19402J3QJV4 266 aa2.98□□□□□ -1.93
Vps50-203ENSMUST00000170873 Gm40193A0A1B0GT39 78 aa2.94□□□□□ -1.94
Vps50-203ENSMUST00000170873 Krtap1-4Q3V2D6 188 aa2.92□□□□□ -1.94
Vps50-203ENSMUST00000170873 Fam229aB2KGE5 128 aa2.91□□□□□ -1.94
Vps50-203ENSMUST00000170873 4932415D10RikA0A1W2P6U8 4986 aa2.89□□□□□ -1.95
Vps50-203ENSMUST00000170873 Hmcn2A2AJ76 5100 aa2.88□□□□□ -1.95
Vps50-203ENSMUST00000170873 Lce1dQ9D731 133 aa2.87□□□□□ -1.95
Vps50-203ENSMUST00000170873 Rnf213E9Q555 5152 aaKnown RBP2.84□□□□□ -1.95
Vps50-203ENSMUST00000170873 Krtap1-3A2A588 173 aa2.83□□□□□ -1.96
Vps50-203ENSMUST00000170873 ZanO88799 5376 aa2.83□□□□□ -1.96
Vps50-203ENSMUST00000170873 Ush2AQ2QI47 5193 aa2.82□□□□□ -1.96
Vps50-203ENSMUST00000170873 Crct1Q6PAI5 102 aa2.82□□□□□ -1.96
Vps50-203ENSMUST00000170873 Gm9789Q8BIG3 52 aa2.79□□□□□ -1.96
Vps50-203ENSMUST00000170873 Gm18596A0A1W2P860 280 aa2.79□□□□□ -1.96
Vps50-203ENSMUST00000170873 Lce1jD3YUU5 139 aa2.78□□□□□ -1.96
Vps50-203ENSMUST00000170873 Spink7Q6IE32 76 aa2.78□□□□□ -1.96
Vps50-203ENSMUST00000170873 Gm10318A0A1W2P728 225 aa2.77□□□□□ -1.97
Vps50-203ENSMUST00000170873 Gm19668J3QMD1 248 aa2.77□□□□□ -1.97
Vps50-203ENSMUST00000170873 Krtap19-9aF8WH65 55 aa2.76□□□□□ -1.97
Vps50-203ENSMUST00000170873 Krtap12-1Q9Z287 130 aa2.76□□□□□ -1.97
Vps50-203ENSMUST00000170873 SspoQ8CG65 4998 aa2.75□□□□□ -1.97
Vps50-203ENSMUST00000170873 Camk2n1Q6QWF9 78 aa2.74□□□□□ -1.97
Vps50-203ENSMUST00000170873 Prm1P02319 51 aa2.73□□□□□ -1.97
Vps50-203ENSMUST00000170873 Ubr4A2AN08 5180 aa2.73□□□□□ -1.97
Vps50-203ENSMUST00000170873 Fat4Q2PZL6 4981 aa2.71□□□□□ -1.98
Vps50-203ENSMUST00000170873 Krtap8-1O08633 61 aa2.7□□□□□ -1.98
Vps50-203ENSMUST00000170873 Gm7735D3YX18 52 aa2.69□□□□□ -1.98
Vps50-203ENSMUST00000170873 Krtap17-1A2A5X6 109 aa2.66□□□□□ -1.98
Vps50-203ENSMUST00000170873 LorP18165 486 aa2.64□□□□□ -1.99
Vps50-203ENSMUST00000170873 2310046K23RikA0A0A6YVW6 87 aa2.64□□□□□ -1.99
Vps50-203ENSMUST00000170873 Lce1iQ9D6P5 149 aa2.63□□□□□ -1.99
Vps50-203ENSMUST00000170873 Tnp1P10856 55 aa2.62□□□□□ -1.99
Vps50-203ENSMUST00000170873 Krtap19-2Q925I0 141 aa2.62□□□□□ -1.99
Vps50-203ENSMUST00000170873 Lce1a2Q9D1K4 149 aa2.61□□□□□ -1.99
Vps50-203ENSMUST00000170873 Gm11562A0PK51 136 aa2.61□□□□□ -1.99
Vps50-203ENSMUST00000170873 Krtap31-1Q9D644 177 aa2.61□□□□□ -1.99
Vps50-203ENSMUST00000170873 Krtap19-9bQ99NG9 58 aa2.6□□□□□ -1.99
Vps50-203ENSMUST00000170873 Krtap9-5A2A5X3 358 aa2.55□□□□□ -2
Vps50-203ENSMUST00000170873 Muc5bE9Q5I3 4800 aa2.51□□□□□ -2.01
Vps50-203ENSMUST00000170873 Krtap9-3Q3V2C1 136 aa2.48□□□□□ -2.01
Vps50-203ENSMUST00000170873 Lce1hQ9D6R3 140 aa2.48□□□□□ -2.01
Vps50-203ENSMUST00000170873 Gm10061D3Z714 54 aa2.47□□□□□ -2.01
Vps50-203ENSMUST00000170873 Krtap31-2Q8CAY5 177 aa2.47□□□□□ -2.01
Vps50-203ENSMUST00000170873 Gm6358A0A087WPH4 74 aa2.45□□□□□ -2.02
Vps50-203ENSMUST00000170873 Gm45618A0A1B0GSA0 219 aa2.43□□□□□ -2.02
Vps50-203ENSMUST00000170873 Mt2P02798 61 aa2.41□□□□□ -2.02
Vps50-203ENSMUST00000170873 Lce1a1Q9CQH5 143 aa2.4□□□□□ -2.03
Vps50-203ENSMUST00000170873 Lce1gQ9D195 139 aa2.4□□□□□ -2.03
Vps50-203ENSMUST00000170873 Lce1lQ9D1G7 135 aa2.35□□□□□ -2.03
Vps50-203ENSMUST00000170873 Sprr2gO70558 76 aa2.35□□□□□ -2.03
Vps50-203ENSMUST00000170873 Sprr2dO70555 85 aa2.34□□□□□ -2.04
Vps50-203ENSMUST00000170873 Gm38119A0A0A6YX29 146 aa2.31□□□□□ -2.04
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms