RNA–Protein interactions for RNA: ENSMUST00000167546.1

Usf1-210, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usf1, Length 1,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-210ENSMUST00000167546 Gm10318A0A1W2P728 225 aa11.37□□□□□ -0.59
Usf1-210ENSMUST00000167546 1700042G07RikB1AUF7 90 aa11.31□□□□□ -0.6
Usf1-210ENSMUST00000167546 Gm10643Q3URG9 111 aa11.3□□□□□ -0.6
Usf1-210ENSMUST00000167546 Q8BGJ3 129 aa11.3□□□□□ -0.6
Usf1-210ENSMUST00000167546 Gm10999F6Q4M4 69 aa11.28□□□□□ -0.6
Usf1-210ENSMUST00000167546 Gm19402J3QJV4 266 aa11.25□□□□□ -0.61
Usf1-210ENSMUST00000167546 9230102O04RikA2ASX7 82 aa11.23□□□□□ -0.61
Usf1-210ENSMUST00000167546 4933415A04RikQ9D443 101 aa11.22□□□□□ -0.61
Usf1-210ENSMUST00000167546 Defb38Q7TNV7 63 aa11.19□□□□□ -0.62
Usf1-210ENSMUST00000167546 Krtap1-4Q3V2D6 188 aa11.17□□□□□ -0.62
Usf1-210ENSMUST00000167546 Gm20661K7N787 53 aa11.12□□□□□ -0.63
Usf1-210ENSMUST00000167546 Ndufb1P0DN34 57 aa11.12□□□□□ -0.63
Usf1-210ENSMUST00000167546 Krtap13-1Q8K198 168 aa11.09□□□□□ -0.63
Usf1-210ENSMUST00000167546 4930507D05RikQ8C9C9 103 aa11.06□□□□□ -0.64
Usf1-210ENSMUST00000167546 Gm10061D3Z714 54 aa11.04□□□□□ -0.64
Usf1-210ENSMUST00000167546 Limd2Q8BGB5 128 aa11.02□□□□□ -0.64
Usf1-210ENSMUST00000167546 Gm21798J3QNU5 87 aa11.02□□□□□ -0.65
Usf1-210ENSMUST00000167546 2210017I01RikA0A0A6YVV1 95 aa11.01□□□□□ -0.65
Usf1-210ENSMUST00000167546 2310079G19RikQ9D6L6 185 aa11□□□□□ -0.65
Usf1-210ENSMUST00000167546 Uqcr11Q9CPX8 56 aa10.98□□□□□ -0.65
Usf1-210ENSMUST00000167546 SptssbQ925E8 76 aa10.93□□□□□ -0.66
Usf1-210ENSMUST00000167546 Krtap1-5A2A590 122 aa10.91□□□□□ -0.66
Usf1-210ENSMUST00000167546 SspoQ8CG65 4998 aa10.87□□□□□ -0.67
Usf1-210ENSMUST00000167546 Krtap17-1A2A5X6 109 aa10.73□□□□□ -0.69
Usf1-210ENSMUST00000167546 Gm11569B1AQB1 180 aa10.72□□□□□ -0.69
Usf1-210ENSMUST00000167546 Gm3646F6S692 53 aa10.71□□□□□ -0.69
Usf1-210ENSMUST00000167546 Defb1P56386 69 aa10.71□□□□□ -0.69
Usf1-210ENSMUST00000167546 Krtap3-1A2A591 98 aa10.65□□□□□ -0.7
Usf1-210ENSMUST00000167546 Cox6b2Q80ZN9 88 aa10.57□□□□□ -0.72
Usf1-210ENSMUST00000167546 Gm17606F6ZL36 78 aa10.51□□□□□ -0.73
Usf1-210ENSMUST00000167546 Gm19426M0QWC7 77 aa10.51□□□□□ -0.73
Usf1-210ENSMUST00000167546 Gm11562A0PK51 136 aa10.44□□□□□ -0.74
Usf1-210ENSMUST00000167546 Sec61gP60060 68 aa10.42□□□□□ -0.74
Usf1-210ENSMUST00000167546 Ndufs5Q99LY9 106 aa10.42□□□□□ -0.74
Usf1-210ENSMUST00000167546 Krtap4-2B1AQ85 167 aa10.35□□□□□ -0.75
Usf1-210ENSMUST00000167546 BC029722A0A0N4SW31 51 aa10.33□□□□□ -0.76
Usf1-210ENSMUST00000167546 B930094E09RikQ8C4T2 136 aa10.3□□□□□ -0.76
Usf1-210ENSMUST00000167546 Lce1jD3YUU5 139 aa10.28□□□□□ -0.76
Usf1-210ENSMUST00000167546 Krtap12-1Q9Z287 130 aa10.28□□□□□ -0.76
Usf1-210ENSMUST00000167546 Gm20537G3UYK7 97 aa10.28□□□□□ -0.76
Usf1-210ENSMUST00000167546 Krtap19-2Q925I0 141 aa10.28□□□□□ -0.76
Usf1-210ENSMUST00000167546 Gm10382Q3V0T5 144 aa10.27□□□□□ -0.77
Usf1-210ENSMUST00000167546 Krtap9-5A2A5X3 358 aa10.26□□□□□ -0.77
Usf1-210ENSMUST00000167546 Pla2g10Q9QXX3 151 aa10.25□□□□□ -0.77
Usf1-210ENSMUST00000167546 Lce1gQ9D195 139 aa10.23□□□□□ -0.77
Usf1-210ENSMUST00000167546 Krtap19-9aF8WH65 55 aa10.07□□□□□ -0.8
Usf1-210ENSMUST00000167546 CriptO70333 101 aa10.07□□□□□ -0.8
Usf1-210ENSMUST00000167546 Muc5bE9Q5I3 4800 aa10.06□□□□□ -0.8
Usf1-210ENSMUST00000167546 Spink7Q6IE32 76 aa10.03□□□□□ -0.8
Usf1-210ENSMUST00000167546 Gm11555B1AQ89 175 aa10.02□□□□□ -0.81
Usf1-210ENSMUST00000167546 Prm2P07978 107 aa10□□□□□ -0.81
Usf1-210ENSMUST00000167546 Gm9955Q8CEJ8 102 aa9.91□□□□□ -0.82
Usf1-210ENSMUST00000167546 Syne2Q6ZWQ0 6874 aaKnown RBP9.91□□□□□ -0.82
Usf1-210ENSMUST00000167546 Gm11596B1AQB0 205 aa9.87□□□□□ -0.83
Usf1-210ENSMUST00000167546 Krtap4-6Q3V4B7 195 aa9.84□□□□□ -0.83
Usf1-210ENSMUST00000167546 Gm6358A0A087WPH4 74 aa9.8□□□□□ -0.84
Usf1-210ENSMUST00000167546 Gm3880A0A1B0GSB3 72 aa9.76□□□□□ -0.85
Usf1-210ENSMUST00000167546 Mdn1A2ANY6 5589 aaKnown RBP9.73□□□□□ -0.85
Usf1-210ENSMUST00000167546 Krtap4-1Q3UUY3 169 aa9.66□□□□□ -0.86
Usf1-210ENSMUST00000167546 Lce1iQ9D6P5 149 aa9.64□□□□□ -0.87
Usf1-210ENSMUST00000167546 Sprr2a3Q4KL71 83 aa9.57□□□□□ -0.88
Usf1-210ENSMUST00000167546 Sprr2a1Q9CQK8 83 aa9.57□□□□□ -0.88
Usf1-210ENSMUST00000167546 Gm17402F6Z0L5 76 aa9.54□□□□□ -0.88
Usf1-210ENSMUST00000167546 Gm12216A0A1W2P827 62 aa9.51□□□□□ -0.89
Usf1-210ENSMUST00000167546 Lce1a2Q9D1K4 149 aa9.48□□□□□ -0.89
Usf1-210ENSMUST00000167546 Romo1P60603 79 aa9.47□□□□□ -0.89
Usf1-210ENSMUST00000167546 Gm11564A2A4L9 201 aa9.42□□□□□ -0.9
Usf1-210ENSMUST00000167546 Gm11563B1AQ90 168 aa9.42□□□□□ -0.9
Usf1-210ENSMUST00000167546 Gm11595B1AQA7 289 aa9.42□□□□□ -0.9
Usf1-210ENSMUST00000167546 Krtap4-8B1AQA8 209 aa9.42□□□□□ -0.9
Usf1-210ENSMUST00000167546 Mt2P02798 61 aa9.38□□□□□ -0.91
Usf1-210ENSMUST00000167546 Gm19668J3QMD1 248 aa9.2□□□□□ -0.94
Usf1-210ENSMUST00000167546 Krtap8-1O08633 61 aa9.18□□□□□ -0.94
Usf1-210ENSMUST00000167546 Krtap4-9B1AQA9 244 aa9.15□□□□□ -0.95
Usf1-210ENSMUST00000167546 Krtap9-3Q3V2C1 136 aa9.05□□□□□ -0.96
Usf1-210ENSMUST00000167546 Mt4P47945 62 aa9.05□□□□□ -0.96
Usf1-210ENSMUST00000167546 Gm21887J3QQ04 176 aa8.99□□□□□ -0.97
Usf1-210ENSMUST00000167546 Krtap22-2J3QNX6 67 aa8.93□□□□□ -0.98
Usf1-210ENSMUST00000167546 Mp68P56379 58 aa8.93□□□□□ -0.98
Usf1-210ENSMUST00000167546 Fsip2A2ARZ3 6995 aa8.91□□□□□ -0.98
Usf1-210ENSMUST00000167546 Gm20538F6Z9R1 75 aa8.9□□□□□ -0.98
Usf1-210ENSMUST00000167546 Camk2n1Q6QWF9 78 aa8.87□□□□□ -0.99
Usf1-210ENSMUST00000167546 Krtap4-13Q9D7P3 165 aa8.81□□□□□ -1
Usf1-210ENSMUST00000167546 Lce1bQ9D149 137 aa8.79□□□□□ -1
Usf1-210ENSMUST00000167546 Krtap19-9bQ99NG9 58 aa8.78□□□□□ -1
Usf1-210ENSMUST00000167546 Gm40193A0A1B0GT39 78 aa8.75□□□□□ -1.01
Usf1-210ENSMUST00000167546 Krtap7-1Q9D3I6 87 aa8.68□□□□□ -1.02
Usf1-210ENSMUST00000167546 Sprr2kO70562 68 aa8.66□□□□□ -1.02
Usf1-210ENSMUST00000167546 Krtap6-3A0A087WQL6 57 aa8.65□□□□□ -1.02
Usf1-210ENSMUST00000167546 Gm38119A0A0A6YX29 146 aa8.61□□□□□ -1.03
Usf1-210ENSMUST00000167546 2300003K06RikA2A4M0 262 aa8.54□□□□□ -1.04
Usf1-210ENSMUST00000167546 Lce1lQ9D1G7 135 aa8.4□□□□□ -1.06
Usf1-210ENSMUST00000167546 Krtap4-7Q9D732 168 aa8.4□□□□□ -1.07
Usf1-210ENSMUST00000167546 Ndufaf8A2AMZ4 74 aa8.25□□□□□ -1.09
Usf1-210ENSMUST00000167546 Sprr2gO70558 76 aa8.1□□□□□ -1.11
Usf1-210ENSMUST00000167546 Lce1hQ9D6R3 140 aa8.08□□□□□ -1.12
Usf1-210ENSMUST00000167546 Lce1a1Q9CQH5 143 aa7.95□□□□□ -1.14
Usf1-210ENSMUST00000167546 Tnp1P10856 55 aa7.94□□□□□ -1.14
Usf1-210ENSMUST00000167546 Lce1dQ9D731 133 aa7.93□□□□□ -1.14
Usf1-210ENSMUST00000167546 Krtap20-2E9Q0A8 60 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms