RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Gm11627A6PWP4 55 aa3.68□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Birc6O88738 4882 aa3.68□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Gm5965D3Z724 196 aa3.67□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Dnah2P0C6F1 4456 aa3.67□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Dync1h1Q9JHU4 4644 aaKnown RBP3.66□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Krtap13O88375 197 aa3.66□□□□□ -1.82
Ccdc38-203ENSMUST00000132214 Gm3880A0A1B0GSB3 72 aa3.64□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Gm20537G3UYK7 97 aa3.63□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Camk2n1Q6QWF9 78 aa3.63□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 HrnrQ8VHD8 2496 aa3.62□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 B930094E09RikQ8C4T2 136 aa3.62□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Abca13Q5SSE9 5034 aa3.62□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Dnah5Q8VHE6 4621 aa3.62□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Dnah8Q91XQ0 4731 aa3.61□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Fat1A0A1L1SQU7 4645 aa3.6□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 PcloQ9QYX7 5068 aa3.6□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Gm10139O88245 57 aa3.6□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Kiaa1109A2AAE1 5005 aa3.6□□□□□ -1.83
Ccdc38-203ENSMUST00000132214 Cox6b2Q80ZN9 88 aa3.59□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 2300003K06RikA2A4M0 262 aa3.58□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Krtap12-1Q9Z287 130 aa3.58□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Kmt2cQ8BRH4 4903 aa3.56□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 CriptO70333 101 aa3.56□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Gm4491E0CX42 125 aa3.55□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Pkhd1E9PZ36 4059 aa3.55□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Gm10142J3KMP7 120 aa3.55□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 4930507D05RikQ8C9C9 103 aa3.54□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 2310079G19RikQ9D6L6 185 aa3.54□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Krtap1-5A2A590 122 aa3.54□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Gm10642Q3TWM1 71 aa3.53□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 1600014C23RikQ9DAX4 101 aa3.53□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 Herc1E9PZP8 4859 aa3.53□□□□□ -1.84
Ccdc38-203ENSMUST00000132214 HydinQ80W93 5154 aa3.52□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Mycbp2Q7TPH6 4711 aa3.51□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Dnhd1D3Z2X2 4750 aa3.51□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Adm2Q7TNK8 150 aa3.51□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Defb13Q8R2I4 64 aa3.51□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Gm40193A0A1B0GT39 78 aa3.5□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Gm10382Q3V0T5 144 aa3.5□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Gm10999F6Q4M4 69 aa3.49□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 NbdyA0A0N4SUI7 68 aa3.48□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Hectd4E9Q2E4 4418 aa3.48□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Gm9955Q8CEJ8 102 aa3.47□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 ApobE9Q414 4505 aa3.46□□□□□ -1.85
Ccdc38-203ENSMUST00000132214 Gpr15lA0A0B4J1N3 78 aa3.46□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Vps13bQ80TY5 3993 aa3.46□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Defb1P56386 69 aa3.44□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Rpl37Q9D823 97 aa3.44□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Gm16253D3Z167 63 aa3.44□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Prm1P02319 51 aa3.43□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Lrp1bQ9JI18 4599 aa3.43□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 D6Ertd527eA0A0N4SWI3 464 aa3.43□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 A930033H14RikG5E8X6 103 aa3.43□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Defb39Q70KL3 74 aa3.42□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Pkhd1l1Q80ZA4 4249 aa3.42□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Krtap19-5O08632 62 aa3.42□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Fat3Q8BNA6 4555 aa3.41□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Gm7735D3YX18 52 aa3.4□□□□□ -1.86
Ccdc38-203ENSMUST00000132214 Krtap7-1Q9D3I6 87 aa3.4□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 4932415D10RikA0A1W2P6U8 4986 aa3.39□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Gm17416Q30KP4 66 aa3.39□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Krtap17-1A2A5X6 109 aa3.36□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Lrp2A2ARV4 4660 aa3.36□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Spaca4Q80ZQ0 127 aa3.35□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Fat2Q5F226 4351 aa3.35□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Gm9789Q8BIG3 52 aa3.34□□□□□ -1.87
Ccdc38-203ENSMUST00000132214 Gm39115A0A1B0GSH7 232 aa3.34□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Ush2AQ2QI47 5193 aa3.33□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Lrp1Q91ZX7 4545 aaKnown RBP3.31□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Gm17606F6ZL36 78 aa3.31□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Krtap4-9B1AQA9 244 aa3.29□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Ubr4A2AN08 5180 aa3.28□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Hmcn2A2AJ76 5100 aa3.28□□□□□ -1.88
Ccdc38-203ENSMUST00000132214 Gm10272F7CZ33 110 aa3.26□□□□□ -1.89
Ccdc38-203ENSMUST00000132214 Gm11569B1AQB1 180 aa3.22□□□□□ -1.89
Ccdc38-203ENSMUST00000132214 Gm11554B1AQB2 190 aa3.22□□□□□ -1.89
Ccdc38-203ENSMUST00000132214 Gm19426M0QWC7 77 aa3.19□□□□□ -1.9
Ccdc38-203ENSMUST00000132214 Lce1kJ3QP15 125 aa3.19□□□□□ -1.9
Ccdc38-203ENSMUST00000132214 Gm11562A0PK51 136 aa3.17□□□□□ -1.9
Ccdc38-203ENSMUST00000132214 Rps29P62274 56 aa3.16□□□□□ -1.9
Ccdc38-203ENSMUST00000132214 Gm29735A0A1B0GT06 219 aa3.14□□□□□ -1.91
Ccdc38-203ENSMUST00000132214 Gm5767A0A0J9YTU8 78 aa3.08□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Gm2431E9Q8S1 172 aa3.08□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Lce1cQ9D1C5 147 aa3.06□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Gm11567Q9D141 195 aa3.05□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Krtap9-1Q64526 186 aa3.04□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Fat4Q2PZL6 4981 aa3.04□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Mt3P28184 68 aa3.03□□□□□ -1.92
Ccdc38-203ENSMUST00000132214 Gm17402F6Z0L5 76 aa3.03□□□□□ -1.93
Ccdc38-203ENSMUST00000132214 ZanO88799 5376 aa3.02□□□□□ -1.93
Ccdc38-203ENSMUST00000132214 Lce1fB9EJP6 147 aa3.01□□□□□ -1.93
Ccdc38-203ENSMUST00000132214 Krtap13-1Q8K198 168 aa2.99□□□□□ -1.93
Ccdc38-203ENSMUST00000132214 Sprr2a3Q4KL71 83 aa2.95□□□□□ -1.94
Ccdc38-203ENSMUST00000132214 Sprr2a1Q9CQK8 83 aa2.95□□□□□ -1.94
Ccdc38-203ENSMUST00000132214 Gm10061D3Z714 54 aa2.95□□□□□ -1.94
Ccdc38-203ENSMUST00000132214 Crct1Q6PAI5 102 aa2.93□□□□□ -1.94
Ccdc38-203ENSMUST00000132214 Rnf213E9Q555 5152 aaKnown RBP2.93□□□□□ -1.94
Ccdc38-203ENSMUST00000132214 Gm11595B1AQA7 289 aa2.89□□□□□ -1.95
Ccdc38-203ENSMUST00000132214 Hmcn1D3YXG0 5634 aa2.89□□□□□ -1.95
Ccdc38-203ENSMUST00000132214 Krtap4-13Q9D7P3 165 aa2.89□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms