RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Sprr2gO70558 76 aa2.21□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Krtap1-4Q3V2D6 188 aa2.2□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Gm10100J3QK64 120 aa2.2□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Lama5Q61001 3718 aa2.19□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Csmd3Q80T79 3707 aa2.17□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Muc6Q80T03 2850 aa2.17□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Gm10272F7CZ33 110 aa2.16□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Dnah8Q91XQ0 4731 aa2.15□□□□□ -2.06
Scn1a-203ENSMUST00000112366 Gm10142J3KMP7 120 aa2.15□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Lce3bQ9CQM7 98 aa2.15□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Lce3cQ91V05 98 aa2.14□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Xirp2Q4U4S6 3784 aa2.13□□□□□ -2.07
Scn1a-203ENSMUST00000112366 LystP97412 3788 aa2.1□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Dnhd1D3Z2X2 4750 aa2.09□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Lce3eF8VQJ0 98 aa2.09□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Lce3fQ6PAI4 98 aa2.09□□□□□ -2.07
Scn1a-203ENSMUST00000112366 Ryr2E9Q401 4966 aaKnown RBP2.09□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Lce3dE9Q8V1 98 aa2.07□□□□□ -2.08
Scn1a-203ENSMUST00000112366 2310046K23RikA0A0A6YVW6 87 aa2.07□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Birc6O88738 4882 aa2.05□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Ank2Q8C8R3 3898 aa2.05□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Lce3aQ497I5 98 aa2.05□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Hspg2Q05793 3707 aaKnown RBP2.04□□□□□ -2.08
Scn1a-203ENSMUST00000112366 LorP18165 486 aa2.03□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Stard9Q80TF6 4561 aa2.03□□□□□ -2.08
Scn1a-203ENSMUST00000112366 Gm10024A0A0A0MQA4 119 aa2.03□□□□□ -2.08
Scn1a-203ENSMUST00000112366 BsnO88737 3942 aa2.01□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Krtap31-2Q8CAY5 177 aa2.01□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Krtap31-1Q9D644 177 aa2□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Herc2Q4U2R1 4836 aa1.99□□□□□ -2.09
Scn1a-203ENSMUST00000112366 PcloQ9QYX7 5068 aa1.99□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Huwe1Q7TMY8 4377 aaKnown RBP1.99□□□□□ -2.09
Scn1a-203ENSMUST00000112366 HydinQ80W93 5154 aa1.98□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Kmt2cQ8BRH4 4903 aa1.98□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Abca13Q5SSE9 5034 aa1.97□□□□□ -2.09
Scn1a-203ENSMUST00000112366 Sprr2iO70560 76 aa1.95□□□□□ -2.1
Scn1a-203ENSMUST00000112366 PlecQ9QXS1 4691 aaKnown RBP1.94□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Kiaa1109A2AAE1 5005 aa1.94□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Ryr3A2AGL3 4863 aa1.94□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Sprr2eO70556 76 aa1.93□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Sprr2fO70557 76 aa1.93□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Lce1jD3YUU5 139 aa1.92□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Lce1gQ9D195 139 aa1.92□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Lce1iQ9D6P5 149 aa1.92□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Lce1hQ9D6R3 140 aa1.92□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Krtap19-3Q925H6 87 aa1.92□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Krtap4-1Q3UUY3 169 aa1.9□□□□□ -2.1
Scn1a-203ENSMUST00000112366 Krtap22-2J3QNX6 67 aa1.9□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Dnah3Q8BW94 4083 aa1.9□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Dync1h1Q9JHU4 4644 aaKnown RBP1.89□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Dnah10D3YYQ8 4591 aa1.89□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Dnah7bL7N1Y0 4068 aa1.89□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Dnah6E9Q0B6 4144 aa1.89□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Krtap19-4Q925H7 84 aa1.87□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Krtap9-5A2A5X3 358 aa1.87□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Krtap16-3Q8C1I6 86 aa1.87□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Krtap19-2Q925I0 141 aa1.86□□□□□ -2.11
Scn1a-203ENSMUST00000112366 4932415D10RikA0A1W2P6U8 4986 aa1.86□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lce1fB9EJP6 147 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lce1cQ9D1C5 147 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lce1lQ9D1G7 135 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lce1dQ9D731 133 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lce1eQ9D139 143 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Krtap9-3Q3V2C1 136 aa1.85□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Lrp1bQ9JI18 4599 aa1.84□□□□□ -2.11
Scn1a-203ENSMUST00000112366 Mt2P02798 61 aa1.84□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Gm11563B1AQ90 168 aa1.83□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Krtap4-7Q9D732 168 aa1.83□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Lce1bQ9D149 137 aa1.83□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Muc5bE9Q5I3 4800 aa1.82□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Gm38119A0A0A6YX29 146 aa1.82□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Ubr4A2AN08 5180 aa1.81□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Mycbp2Q7TPH6 4711 aa1.81□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Rnf213E9Q555 5152 aaKnown RBP1.8□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Lce1mQ9CR91 182 aa1.79□□□□□ -2.12
Scn1a-203ENSMUST00000112366 TnxbO35452 4006 aa1.79□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Fras1Q80T14 4010 aa1.79□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Dnah5Q8VHE6 4621 aa1.79□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Krtap4-2B1AQ85 167 aa1.78□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Sprr2dO70555 85 aa1.78□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Sprr2hO70559 108 aa1.78□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Dnah14A0A140LIJ4 4489 aa1.78□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Dnah7cA0A087WR13 4024 aa1.78□□□□□ -2.12
Scn1a-203ENSMUST00000112366 Lrp1Q91ZX7 4545 aaKnown RBP1.78□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Krtap17-1A2A5X6 109 aa1.78□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Hmcn2A2AJ76 5100 aa1.77□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Mt3P28184 68 aa1.77□□□□□ -2.13
Scn1a-203ENSMUST00000112366 SacsQ9JLC8 4582 aa1.76□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Ush2AQ2QI47 5193 aa1.75□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Vps13dB1ART2 4390 aa1.75□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Dnah7aE9Q0T8 4024 aa1.74□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Fat3Q8BNA6 4555 aa1.73□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Lrp2A2ARV4 4660 aa1.73□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Fat4Q2PZL6 4981 aa1.72□□□□□ -2.13
Scn1a-203ENSMUST00000112366 PrkdcP97313 4128 aa1.72□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Dnah2P0C6F1 4456 aa1.72□□□□□ -2.13
Scn1a-203ENSMUST00000112366 Krtap1-3A2A588 173 aa1.71□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Dnah17Q69Z23 4481 aa1.69□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Vps13bQ80TY5 3993 aa1.68□□□□□ -2.14
Scn1a-203ENSMUST00000112366 Krtap19-1Q925H2 87 aa1.68□□□□□ -2.14
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms