RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm17416Q30KP4 66 aa6.56□□□□□ -1.36
Nup88-203ENSMUST00000108531 CriptO70333 101 aa6.54□□□□□ -1.36
Nup88-203ENSMUST00000108531 Romo1P60603 79 aa6.54□□□□□ -1.36
Nup88-203ENSMUST00000108531 Krtap3-1A2A591 98 aa6.53□□□□□ -1.36
Nup88-203ENSMUST00000108531 Mycbp2Q7TPH6 4711 aa6.48□□□□□ -1.37
Nup88-203ENSMUST00000108531 Gm20538F6Z9R1 75 aa6.47□□□□□ -1.37
Nup88-203ENSMUST00000108531 Mp68P56379 58 aa6.47□□□□□ -1.37
Nup88-203ENSMUST00000108531 Dnah8Q91XQ0 4731 aa6.45□□□□□ -1.38
Nup88-203ENSMUST00000108531 2210017I01RikA0A0A6YVV1 95 aa6.43□□□□□ -1.38
Nup88-203ENSMUST00000108531 Ryr1E9PZQ0 5035 aa6.41□□□□□ -1.38
Nup88-203ENSMUST00000108531 Abca13Q5SSE9 5034 aa6.4□□□□□ -1.39
Nup88-203ENSMUST00000108531 A0A286YCP9 139 aa6.32□□□□□ -1.4
Nup88-203ENSMUST00000108531 Gm21887J3QQ04 176 aa6.31□□□□□ -1.4
Nup88-203ENSMUST00000108531 Gm19426M0QWC7 77 aa6.29□□□□□ -1.4
Nup88-203ENSMUST00000108531 B930094E09RikQ8C4T2 136 aa6.29□□□□□ -1.4
Nup88-203ENSMUST00000108531 BC029722A0A0N4SW31 51 aa6.25□□□□□ -1.41
Nup88-203ENSMUST00000108531 A030003K21RikA0A1Y7VIM3 128 aa6.23□□□□□ -1.41
Nup88-203ENSMUST00000108531 Gm6217A0A1Y7VJK9 128 aa6.23□□□□□ -1.41
Nup88-203ENSMUST00000108531 Krtap13-1Q8K198 168 aa6.23□□□□□ -1.41
Nup88-203ENSMUST00000108531 Dnhd1D3Z2X2 4750 aa6.19□□□□□ -1.42
Nup88-203ENSMUST00000108531 2310057N15RikQ9D6T8 200 aa6.17□□□□□ -1.42
Nup88-203ENSMUST00000108531 Gm17402F6Z0L5 76 aa6.14□□□□□ -1.43
Nup88-203ENSMUST00000108531 Kiaa1109A2AAE1 5005 aa6.13□□□□□ -1.43
Nup88-203ENSMUST00000108531 Krtap1-5A2A590 122 aa6.09□□□□□ -1.43
Nup88-203ENSMUST00000108531 Herc2Q4U2R1 4836 aa6.08□□□□□ -1.44
Nup88-203ENSMUST00000108531 Sec61bQ9CQS8 96 aaKnown RBP6.08□□□□□ -1.44
Nup88-203ENSMUST00000108531 Birc6O88738 4882 aa6.05□□□□□ -1.44
Nup88-203ENSMUST00000108531 Krtap7-1Q9D3I6 87 aa6.04□□□□□ -1.44
Nup88-203ENSMUST00000108531 Prm2P07978 107 aa6.03□□□□□ -1.44
Nup88-203ENSMUST00000108531 Gm19402J3QJV4 266 aa6.02□□□□□ -1.45
Nup88-203ENSMUST00000108531 HydinQ80W93 5154 aa6.01□□□□□ -1.45
Nup88-203ENSMUST00000108531 Ndufaf8A2AMZ4 74 aa5.99□□□□□ -1.45
Nup88-203ENSMUST00000108531 Lrp2A2ARV4 4660 aa5.98□□□□□ -1.45
Nup88-203ENSMUST00000108531 Sprr2a3Q4KL71 83 aa5.96□□□□□ -1.46
Nup88-203ENSMUST00000108531 Sprr2a1Q9CQK8 83 aa5.96□□□□□ -1.46
Nup88-203ENSMUST00000108531 Gm40193A0A1B0GT39 78 aa5.94□□□□□ -1.46
Nup88-203ENSMUST00000108531 Fam229aB2KGE5 128 aa5.9□□□□□ -1.47
Nup88-203ENSMUST00000108531 Spink7Q6IE32 76 aa5.9□□□□□ -1.47
Nup88-203ENSMUST00000108531 Krtap16-3Q8C1I6 86 aa5.88□□□□□ -1.47
Nup88-203ENSMUST00000108531 Gm10318A0A1W2P728 225 aa5.82□□□□□ -1.48
Nup88-203ENSMUST00000108531 Crct1Q6PAI5 102 aa5.81□□□□□ -1.48
Nup88-203ENSMUST00000108531 Krtap19-1Q925H2 87 aa5.8□□□□□ -1.48
Nup88-203ENSMUST00000108531 Gm19668J3QMD1 248 aa5.76□□□□□ -1.49
Nup88-203ENSMUST00000108531 Krtap19-3Q925H6 87 aa5.73□□□□□ -1.49
Nup88-203ENSMUST00000108531 Camk2n1Q6QWF9 78 aa5.71□□□□□ -1.5
Nup88-203ENSMUST00000108531 Krtap1-4Q3V2D6 188 aa5.69□□□□□ -1.5
Nup88-203ENSMUST00000108531 PcloQ9QYX7 5068 aa5.69□□□□□ -1.5
Nup88-203ENSMUST00000108531 A0A1Y7VJ07 166 aa5.66□□□□□ -1.5
Nup88-203ENSMUST00000108531 Herc1E9PZP8 4859 aa5.62□□□□□ -1.51
Nup88-203ENSMUST00000108531 Gm9112A2AI92 75 aa5.53□□□□□ -1.52
Nup88-203ENSMUST00000108531 ZanO88799 5376 aa5.47□□□□□ -1.53
Nup88-203ENSMUST00000108531 4932415D10RikA0A1W2P6U8 4986 aa5.45□□□□□ -1.54
Nup88-203ENSMUST00000108531 Lce1jD3YUU5 139 aa5.43□□□□□ -1.54
Nup88-203ENSMUST00000108531 Tnp1P10856 55 aa5.4□□□□□ -1.54
Nup88-203ENSMUST00000108531 Krtap19-9aF8WH65 55 aa5.39□□□□□ -1.55
Nup88-203ENSMUST00000108531 Krtap12-1Q9Z287 130 aa5.39□□□□□ -1.55
Nup88-203ENSMUST00000108531 Krtap1-3A2A588 173 aa5.38□□□□□ -1.55
Nup88-203ENSMUST00000108531 Hmcn2A2AJ76 5100 aa5.35□□□□□ -1.55
Nup88-203ENSMUST00000108531 Ubr4A2AN08 5180 aa5.34□□□□□ -1.55
Nup88-203ENSMUST00000108531 Lce1mQ9CR91 182 aa5.34□□□□□ -1.56
Nup88-203ENSMUST00000108531 Ush2AQ2QI47 5193 aa5.33□□□□□ -1.56
Nup88-203ENSMUST00000108531 Fat4Q2PZL6 4981 aa5.31□□□□□ -1.56
Nup88-203ENSMUST00000108531 LorP18165 486 aa5.28□□□□□ -1.56
Nup88-203ENSMUST00000108531 A030014E15RikA0A1Y7VJV2 120 aa5.22□□□□□ -1.57
Nup88-203ENSMUST00000108531 Krtap8-1O08633 61 aa5.22□□□□□ -1.57
Nup88-203ENSMUST00000108531 Rnf213E9Q555 5152 aaKnown RBP5.19□□□□□ -1.58
Nup88-203ENSMUST00000108531 Gm9789Q8BIG3 52 aa5.15□□□□□ -1.58
Nup88-203ENSMUST00000108531 2310046K23RikA0A0A6YVW6 87 aa5.14□□□□□ -1.59
Nup88-203ENSMUST00000108531 Krtap17-1A2A5X6 109 aa5.14□□□□□ -1.59
Nup88-203ENSMUST00000108531 Krtap19-9bQ99NG9 58 aa5.13□□□□□ -1.59
Nup88-203ENSMUST00000108531 Lce1iQ9D6P5 149 aa5.11□□□□□ -1.59
Nup88-203ENSMUST00000108531 Lce1a2Q9D1K4 149 aa5.07□□□□□ -1.6
Nup88-203ENSMUST00000108531 Krtap19-2Q925I0 141 aa5.06□□□□□ -1.6
Nup88-203ENSMUST00000108531 Prm1P02319 51 aa5.02□□□□□ -1.61
Nup88-203ENSMUST00000108531 SspoQ8CG65 4998 aa5.02□□□□□ -1.61
Nup88-203ENSMUST00000108531 Gm18596A0A1W2P860 280 aa5.02□□□□□ -1.61
Nup88-203ENSMUST00000108531 Krtap9-5A2A5X3 358 aa5.01□□□□□ -1.61
Nup88-203ENSMUST00000108531 Gm7735D3YX18 52 aa5□□□□□ -1.61
Nup88-203ENSMUST00000108531 Krtap9-3Q3V2C1 136 aa4.95□□□□□ -1.62
Nup88-203ENSMUST00000108531 Lce1hQ9D6R3 140 aa4.9□□□□□ -1.63
Nup88-203ENSMUST00000108531 Mt2P02798 61 aa4.75□□□□□ -1.65
Nup88-203ENSMUST00000108531 Gm6358A0A087WPH4 74 aa4.72□□□□□ -1.65
Nup88-203ENSMUST00000108531 Muc5bE9Q5I3 4800 aa4.72□□□□□ -1.65
Nup88-203ENSMUST00000108531 Gm10061D3Z714 54 aa4.67□□□□□ -1.66
Nup88-203ENSMUST00000108531 Lce1dQ9D731 133 aa4.65□□□□□ -1.67
Nup88-203ENSMUST00000108531 Sprr2gO70558 76 aa4.58□□□□□ -1.68
Nup88-203ENSMUST00000108531 4933428G20RikQ9D3X4 101 aa4.53□□□□□ -1.68
Nup88-203ENSMUST00000108531 Sprr2dO70555 85 aa4.49□□□□□ -1.69
Nup88-203ENSMUST00000108531 Lce1eQ9D139 143 aa4.49□□□□□ -1.69
Nup88-203ENSMUST00000108531 Gm11938Q9D3H4 131 aa4.48□□□□□ -1.69
Nup88-203ENSMUST00000108531 Krtap22-2J3QNX6 67 aa4.46□□□□□ -1.7
Nup88-203ENSMUST00000108531 Gm10272F7CZ33 110 aa4.44□□□□□ -1.7
Nup88-203ENSMUST00000108531 Gm11562A0PK51 136 aa4.32□□□□□ -1.72
Nup88-203ENSMUST00000108531 Gm11569B1AQB1 180 aa4.3□□□□□ -1.72
Nup88-203ENSMUST00000108531 Lce1cQ9D1C5 147 aa4.26□□□□□ -1.73
Nup88-203ENSMUST00000108531 Krtap4-1Q3UUY3 169 aa4.24□□□□□ -1.73
Nup88-203ENSMUST00000108531 Mdn1A2ANY6 5589 aaKnown RBP4.2□□□□□ -1.74
Nup88-203ENSMUST00000108531 Krtap19-4Q925H7 84 aa4.19□□□□□ -1.74
Nup88-203ENSMUST00000108531 Krtap4-2B1AQ85 167 aa4.17□□□□□ -1.74
Nup88-203ENSMUST00000108531 Gm10100J3QK64 120 aa4.15□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 107.9 ms