RNA–Protein interactions for RNA: ENSMUST00000101395.2

Hoxa4-201, Transcript of Homeobox protein Hox-A4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa4, Length 1,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4-201ENSMUST00000101395 Krtap1-3A2A588 173 aa14.26□□□□□ -0.13
Hoxa4-201ENSMUST00000101395 Krtap13-1Q8K198 168 aa14.26□□□□□ -0.13
Hoxa4-201ENSMUST00000101395 Crct1Q6PAI5 102 aa14.23□□□□□ -0.13
Hoxa4-201ENSMUST00000101395 H2al1bA0A087WP11 105 aa14.2□□□□□ -0.14
Hoxa4-201ENSMUST00000101395 Krtap19-3Q925H6 87 aa14.2□□□□□ -0.14
Hoxa4-201ENSMUST00000101395 Limd2Q8BGB5 128 aa14.19□□□□□ -0.14
Hoxa4-201ENSMUST00000101395 4932415D10RikA0A1W2P6U8 4986 aa14.18□□□□□ -0.14
Hoxa4-201ENSMUST00000101395 Gm17606F6ZL36 78 aa14.17□□□□□ -0.14
Hoxa4-201ENSMUST00000101395 Krtap3-1A2A591 98 aa14.14□□□□□ -0.15
Hoxa4-201ENSMUST00000101395 Ndufb1P0DN34 57 aa14.14□□□□□ -0.15
Hoxa4-201ENSMUST00000101395 Krtap1-5A2A590 122 aa14.09□□□□□ -0.15
Hoxa4-201ENSMUST00000101395 Gm19402J3QJV4 266 aa13.96□□□□□ -0.18
Hoxa4-201ENSMUST00000101395 ZanO88799 5376 aa13.95□□□□□ -0.18
Hoxa4-201ENSMUST00000101395 1700042G07RikB1AUF7 90 aa13.95□□□□□ -0.18
Hoxa4-201ENSMUST00000101395 Gm10318A0A1W2P728 225 aa13.9□□□□□ -0.18
Hoxa4-201ENSMUST00000101395 Sec61gP60060 68 aa13.88□□□□□ -0.19
Hoxa4-201ENSMUST00000101395 Gm10382Q3V0T5 144 aa13.83□□□□□ -0.19
Hoxa4-201ENSMUST00000101395 LorP18165 486 aa13.81□□□□□ -0.2
Hoxa4-201ENSMUST00000101395 Krtap1-4Q3V2D6 188 aa13.81□□□□□ -0.2
Hoxa4-201ENSMUST00000101395 Rnf213E9Q555 5152 aaKnown RBP13.75□□□□□ -0.21
Hoxa4-201ENSMUST00000101395 Gm20537G3UYK7 97 aa13.75□□□□□ -0.21
Hoxa4-201ENSMUST00000101395 Fat4Q2PZL6 4981 aa13.73□□□□□ -0.21
Hoxa4-201ENSMUST00000101395 BC029722A0A0N4SW31 51 aa13.71□□□□□ -0.22
Hoxa4-201ENSMUST00000101395 Sox16Q62247 57 aa13.62□□□□□ -0.23
Hoxa4-201ENSMUST00000101395 Gm19426M0QWC7 77 aa13.54□□□□□ -0.24
Hoxa4-201ENSMUST00000101395 Gm9955Q8CEJ8 102 aa13.51□□□□□ -0.25
Hoxa4-201ENSMUST00000101395 4933415A04RikQ9D443 101 aa13.41□□□□□ -0.26
Hoxa4-201ENSMUST00000101395 Gm10337F7DEP7 55 aa13.25□□□□□ -0.29
Hoxa4-201ENSMUST00000101395 CriptO70333 101 aa13.22□□□□□ -0.29
Hoxa4-201ENSMUST00000101395 H2al1kJ3QP08 105 aa13.2□□□□□ -0.3
Hoxa4-201ENSMUST00000101395 H2al1mQ9DAD9 105 aa13.2□□□□□ -0.3
Hoxa4-201ENSMUST00000101395 SspoQ8CG65 4998 aa13.2□□□□□ -0.3
Hoxa4-201ENSMUST00000101395 Gm10061D3Z714 54 aa13.1□□□□□ -0.31
Hoxa4-201ENSMUST00000101395 Gm17402F6Z0L5 76 aa13.07□□□□□ -0.32
Hoxa4-201ENSMUST00000101395 Spink7Q6IE32 76 aa13.06□□□□□ -0.32
Hoxa4-201ENSMUST00000101395 Krtap12-1Q9Z287 130 aa12.98□□□□□ -0.33
Hoxa4-201ENSMUST00000101395 Lce1jD3YUU5 139 aa12.88□□□□□ -0.35
Hoxa4-201ENSMUST00000101395 Ndufs5Q99LY9 106 aa12.88□□□□□ -0.35
Hoxa4-201ENSMUST00000101395 Gm3646F6S692 53 aa12.83□□□□□ -0.36
Hoxa4-201ENSMUST00000101395 Krtap19-9aF8WH65 55 aa12.82□□□□□ -0.36
Hoxa4-201ENSMUST00000101395 B930094E09RikQ8C4T2 136 aa12.81□□□□□ -0.36
Hoxa4-201ENSMUST00000101395 Sprr2a3Q4KL71 83 aa12.81□□□□□ -0.36
Hoxa4-201ENSMUST00000101395 Sprr2a1Q9CQK8 83 aa12.81□□□□□ -0.36
Hoxa4-201ENSMUST00000101395 Krtap19-2Q925I0 141 aa12.69□□□□□ -0.38
Hoxa4-201ENSMUST00000101395 Gm3880A0A1B0GSB3 72 aa12.68□□□□□ -0.38
Hoxa4-201ENSMUST00000101395 Krtap9-5A2A5X3 358 aa12.6□□□□□ -0.39
Hoxa4-201ENSMUST00000101395 Pla2g10Q9QXX3 151 aa12.56□□□□□ -0.4
Hoxa4-201ENSMUST00000101395 Prm2P07978 107 aa12.55□□□□□ -0.4
Hoxa4-201ENSMUST00000101395 SvipQ3UZP4 77 aa12.52□□□□□ -0.4
Hoxa4-201ENSMUST00000101395 Gm11569B1AQB1 180 aa12.5□□□□□ -0.41
Hoxa4-201ENSMUST00000101395 Krtap17-1A2A5X6 109 aa12.41□□□□□ -0.42
Hoxa4-201ENSMUST00000101395 Gm12216A0A1W2P827 62 aa12.3□□□□□ -0.44
Hoxa4-201ENSMUST00000101395 Muc5bE9Q5I3 4800 aa12.24□□□□□ -0.45
Hoxa4-201ENSMUST00000101395 Gm19668J3QMD1 248 aa12.19□□□□□ -0.46
Hoxa4-201ENSMUST00000101395 Romo1P60603 79 aa12.14□□□□□ -0.47
Hoxa4-201ENSMUST00000101395 Lce1iQ9D6P5 149 aa12.1□□□□□ -0.47
Hoxa4-201ENSMUST00000101395 Gm21887J3QQ04 176 aa12.09□□□□□ -0.47
Hoxa4-201ENSMUST00000101395 Gm6358A0A087WPH4 74 aa12.02□□□□□ -0.49
Hoxa4-201ENSMUST00000101395 Camk2n1Q6QWF9 78 aa11.97□□□□□ -0.49
Hoxa4-201ENSMUST00000101395 Lce1a2Q9D1K4 149 aa11.92□□□□□ -0.5
Hoxa4-201ENSMUST00000101395 Mt2P02798 61 aa11.67□□□□□ -0.54
Hoxa4-201ENSMUST00000101395 Lce1gQ9D195 139 aa11.66□□□□□ -0.54
Hoxa4-201ENSMUST00000101395 Krtap4-2B1AQ85 167 aa11.65□□□□□ -0.54
Hoxa4-201ENSMUST00000101395 Gm11555B1AQ89 175 aa11.62□□□□□ -0.55
Hoxa4-201ENSMUST00000101395 Krtap8-1O08633 61 aa11.58□□□□□ -0.55
Hoxa4-201ENSMUST00000101395 Gm11562A0PK51 136 aa11.58□□□□□ -0.56
Hoxa4-201ENSMUST00000101395 Krtap19-9bQ99NG9 58 aa11.52□□□□□ -0.57
Hoxa4-201ENSMUST00000101395 Mdn1A2ANY6 5589 aaKnown RBP11.39□□□□□ -0.59
Hoxa4-201ENSMUST00000101395 Krtap4-6Q3V4B7 195 aa11.38□□□□□ -0.59
Hoxa4-201ENSMUST00000101395 Gm11596B1AQB0 205 aa11.27□□□□□ -0.61
Hoxa4-201ENSMUST00000101395 Krtap4-1Q3UUY3 169 aa11.17□□□□□ -0.62
Hoxa4-201ENSMUST00000101395 Syne2Q6ZWQ0 6874 aaKnown RBP11.15□□□□□ -0.62
Hoxa4-201ENSMUST00000101395 Krtap22-2J3QNX6 67 aa11.11□□□□□ -0.63
Hoxa4-201ENSMUST00000101395 Gm40193A0A1B0GT39 78 aa11.08□□□□□ -0.64
Hoxa4-201ENSMUST00000101395 Krtap7-1Q9D3I6 87 aa10.96□□□□□ -0.65
Hoxa4-201ENSMUST00000101395 Gm11564A2A4L9 201 aa10.88□□□□□ -0.67
Hoxa4-201ENSMUST00000101395 Gm11563B1AQ90 168 aa10.88□□□□□ -0.67
Hoxa4-201ENSMUST00000101395 Gm11595B1AQA7 289 aa10.88□□□□□ -0.67
Hoxa4-201ENSMUST00000101395 Krtap4-8B1AQA8 209 aa10.88□□□□□ -0.67
Hoxa4-201ENSMUST00000101395 Krtap9-3Q3V2C1 136 aa10.85□□□□□ -0.67
Hoxa4-201ENSMUST00000101395 Tnp1P10856 55 aa10.8□□□□□ -0.68
Hoxa4-201ENSMUST00000101395 Krtap4-9B1AQA9 244 aa10.57□□□□□ -0.72
Hoxa4-201ENSMUST00000101395 Mp68P56379 58 aa10.56□□□□□ -0.72
Hoxa4-201ENSMUST00000101395 Lce1hQ9D6R3 140 aa10.56□□□□□ -0.72
Hoxa4-201ENSMUST00000101395 Mt4P47945 62 aa10.53□□□□□ -0.72
Hoxa4-201ENSMUST00000101395 Lce1bQ9D149 137 aa10.47□□□□□ -0.73
Hoxa4-201ENSMUST00000101395 2310046K23RikA0A0A6YVW6 87 aa10.22□□□□□ -0.77
Hoxa4-201ENSMUST00000101395 Fsip2A2ARZ3 6995 aa10.18□□□□□ -0.78
Hoxa4-201ENSMUST00000101395 Krtap4-13Q9D7P3 165 aa10.15□□□□□ -0.78
Hoxa4-201ENSMUST00000101395 Gm38119A0A0A6YX29 146 aa10.14□□□□□ -0.79
Hoxa4-201ENSMUST00000101395 Sprr2kO70562 68 aa10.06□□□□□ -0.8
Hoxa4-201ENSMUST00000101395 2300003K06RikA2A4M0 262 aa10.01□□□□□ -0.81
Hoxa4-201ENSMUST00000101395 Gm10272F7CZ33 110 aa9.99□□□□□ -0.81
Hoxa4-201ENSMUST00000101395 Krtap6-3A0A087WQL6 57 aa9.9□□□□□ -0.82
Hoxa4-201ENSMUST00000101395 Krtap4-7Q9D732 168 aa9.77□□□□□ -0.85
Hoxa4-201ENSMUST00000101395 Lce3bQ9CQM7 98 aa9.62□□□□□ -0.87
Hoxa4-201ENSMUST00000101395 Lce1lQ9D1G7 135 aa9.61□□□□□ -0.87
Hoxa4-201ENSMUST00000101395 Gm11938Q9D3H4 131 aa9.61□□□□□ -0.87
Hoxa4-201ENSMUST00000101395 Lce1dQ9D731 133 aa9.55□□□□□ -0.88
Hoxa4-201ENSMUST00000101395 Syne1Q6ZWR6 8799 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms