RNA–Protein interactions for RNA: ENSMUST00000086471.11

Suds3-201, Transcript of Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Suds3, Length 2,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3-201ENSMUST00000086471 Ndufs5Q99LY9 106 aa11,67□□□□□ -0,54
Suds3-201ENSMUST00000086471 Ush2AQ2QI47 5193 aa11,66□□□□□ -0,54
Suds3-201ENSMUST00000086471 Crct1Q6PAI5 102 aa11,65□□□□□ -0,54
Suds3-201ENSMUST00000086471 Gm10318A0A1W2P728 225 aa11,62□□□□□ -0,55
Suds3-201ENSMUST00000086471 Sec61bQ9CQS8 96 aaKnown RBP11,58□□□□□ -0,56
Suds3-201ENSMUST00000086471 Ubr4A2AN08 5180 aa11,57□□□□□ -0,56
Suds3-201ENSMUST00000086471 Hmcn2A2AJ76 5100 aa11,57□□□□□ -0,56
Suds3-201ENSMUST00000086471 Gm10382Q3V0T5 144 aa11,52□□□□□ -0,56
Suds3-201ENSMUST00000086471 Gm18596A0A1W2P860 280 aa11,5□□□□□ -0,57
Suds3-201ENSMUST00000086471 Krtap3-1A2A591 98 aa11,48□□□□□ -0,57
Suds3-201ENSMUST00000086471 Krtap13-1Q8K198 168 aa11,47□□□□□ -0,57
Suds3-201ENSMUST00000086471 2210017I01RikA0A0A6YVV1 95 aa11,46□□□□□ -0,58
Suds3-201ENSMUST00000086471 Gm17606F6ZL36 78 aa11,43□□□□□ -0,58
Suds3-201ENSMUST00000086471 Krtap16-3Q8C1I6 86 aa11,43□□□□□ -0,58
Suds3-201ENSMUST00000086471 ZanO88799 5376 aa11,36□□□□□ -0,59
Suds3-201ENSMUST00000086471 Krtap19-1Q925H2 87 aa11,28□□□□□ -0,6
Suds3-201ENSMUST00000086471 4932415D10RikA0A1W2P6U8 4986 aa11,27□□□□□ -0,6
Suds3-201ENSMUST00000086471 Krtap19-3Q925H6 87 aa11,25□□□□□ -0,61
Suds3-201ENSMUST00000086471 Gm20537G3UYK7 97 aa11,19□□□□□ -0,62
Suds3-201ENSMUST00000086471 Pla2g10Q9QXX3 151 aa11,18□□□□□ -0,62
Suds3-201ENSMUST00000086471 Gm9789Q8BIG3 52 aa11,15□□□□□ -0,63
Suds3-201ENSMUST00000086471 Krtap1-3A2A588 173 aa11,14□□□□□ -0,63
Suds3-201ENSMUST00000086471 Krtap1-5A2A590 122 aa11,14□□□□□ -0,63
Suds3-201ENSMUST00000086471 Fam229aB2KGE5 128 aa11,13□□□□□ -0,63
Suds3-201ENSMUST00000086471 Gm9955Q8CEJ8 102 aa11,05□□□□□ -0,64
Suds3-201ENSMUST00000086471 Fat4Q2PZL6 4981 aa11,03□□□□□ -0,64
Suds3-201ENSMUST00000086471 Gm7735D3YX18 52 aa11,01□□□□□ -0,65
Suds3-201ENSMUST00000086471 Prm1P02319 51 aa11□□□□□ -0,65
Suds3-201ENSMUST00000086471 Gm19402J3QJV4 266 aa10,96□□□□□ -0,65
Suds3-201ENSMUST00000086471 LorP18165 486 aa10,96□□□□□ -0,66
Suds3-201ENSMUST00000086471 Gm3880A0A1B0GSB3 72 aa10,95□□□□□ -0,66
Suds3-201ENSMUST00000086471 BC029722A0A0N4SW31 51 aa10,93□□□□□ -0,66
Suds3-201ENSMUST00000086471 Rnf213E9Q555 5152 aaKnown RBP10,81□□□□□ -0,68
Suds3-201ENSMUST00000086471 Gm12216A0A1W2P827 62 aa10,74□□□□□ -0,69
Suds3-201ENSMUST00000086471 Gm19426M0QWC7 77 aa10,73□□□□□ -0,69
Suds3-201ENSMUST00000086471 Krtap1-4Q3V2D6 188 aa10,59□□□□□ -0,71
Suds3-201ENSMUST00000086471 Spink7Q6IE32 76 aa10,59□□□□□ -0,71
Suds3-201ENSMUST00000086471 B930094E09RikQ8C4T2 136 aa10,53□□□□□ -0,72
Suds3-201ENSMUST00000086471 CriptO70333 101 aa10,52□□□□□ -0,73
Suds3-201ENSMUST00000086471 Lce1jD3YUU5 139 aa10,47□□□□□ -0,73
Suds3-201ENSMUST00000086471 Romo1P60603 79 aa10,4□□□□□ -0,74
Suds3-201ENSMUST00000086471 SspoQ8CG65 4998 aa10,37□□□□□ -0,75
Suds3-201ENSMUST00000086471 Krtap17-1A2A5X6 109 aa10,34□□□□□ -0,75
Suds3-201ENSMUST00000086471 Sprr2a3Q4KL71 83 aa10,33□□□□□ -0,76
Suds3-201ENSMUST00000086471 Sprr2a1Q9CQK8 83 aa10,33□□□□□ -0,76
Suds3-201ENSMUST00000086471 Gm21887J3QQ04 176 aa10,31□□□□□ -0,76
Suds3-201ENSMUST00000086471 Gm17402F6Z0L5 76 aa10,27□□□□□ -0,77
Suds3-201ENSMUST00000086471 Krtap12-1Q9Z287 130 aa10,26□□□□□ -0,77
Suds3-201ENSMUST00000086471 Mp68P56379 58 aa10,11□□□□□ -0,79
Suds3-201ENSMUST00000086471 Krtap19-9aF8WH65 55 aa10,09□□□□□ -0,79
Suds3-201ENSMUST00000086471 Gm20538F6Z9R1 75 aa10,05□□□□□ -0,8
Suds3-201ENSMUST00000086471 Gm10061D3Z714 54 aa10,03□□□□□ -0,8
Suds3-201ENSMUST00000086471 Prm2P07978 107 aa10,03□□□□□ -0,8
Suds3-201ENSMUST00000086471 Krtap19-2Q925I0 141 aa9,99□□□□□ -0,81
Suds3-201ENSMUST00000086471 Krtap9-5A2A5X3 358 aa9,98□□□□□ -0,81
Suds3-201ENSMUST00000086471 Lce1iQ9D6P5 149 aa9,81□□□□□ -0,84
Suds3-201ENSMUST00000086471 Gm19668J3QMD1 248 aa9,78□□□□□ -0,84
Suds3-201ENSMUST00000086471 Camk2n1Q6QWF9 78 aa9,72□□□□□ -0,85
Suds3-201ENSMUST00000086471 Lce1a2Q9D1K4 149 aa9,71□□□□□ -0,85
Suds3-201ENSMUST00000086471 Muc5bE9Q5I3 4800 aa9,67□□□□□ -0,86
Suds3-201ENSMUST00000086471 Krtap7-1Q9D3I6 87 aa9,63□□□□□ -0,87
Suds3-201ENSMUST00000086471 Gm11569B1AQB1 180 aa9,57□□□□□ -0,88
Suds3-201ENSMUST00000086471 Gm6358A0A087WPH4 74 aa9,45□□□□□ -0,9
Suds3-201ENSMUST00000086471 Ndufaf8A2AMZ4 74 aa9,42□□□□□ -0,9
Suds3-201ENSMUST00000086471 Gm40193A0A1B0GT39 78 aa9,38□□□□□ -0,91
Suds3-201ENSMUST00000086471 Mdn1A2ANY6 5589 aaKnown RBP9,29□□□□□ -0,92
Suds3-201ENSMUST00000086471 Mt2P02798 61 aa9,25□□□□□ -0,93
Suds3-201ENSMUST00000086471 Krtap8-1O08633 61 aa9,22□□□□□ -0,93
Suds3-201ENSMUST00000086471 Krtap19-9bQ99NG9 58 aa9,14□□□□□ -0,95
Suds3-201ENSMUST00000086471 Krtap9-3Q3V2C1 136 aa8,99□□□□□ -0,97
Suds3-201ENSMUST00000086471 Lce1hQ9D6R3 140 aa8,84□□□□□ -0,99
Suds3-201ENSMUST00000086471 Krtap4-6Q3V4B7 195 aa8,8□□□□□ -1
Suds3-201ENSMUST00000086471 Tnp1P10856 55 aa8,78□□□□□ -1
Suds3-201ENSMUST00000086471 Krtap4-2B1AQ85 167 aa8,73□□□□□ -1,01
Suds3-201ENSMUST00000086471 Lce1gQ9D195 139 aa8,72□□□□□ -1,01
Suds3-201ENSMUST00000086471 Krtap22-2J3QNX6 67 aa8,68□□□□□ -1,02
Suds3-201ENSMUST00000086471 Gm11555B1AQ89 175 aa8,66□□□□□ -1,02
Suds3-201ENSMUST00000086471 Krtap4-1Q3UUY3 169 aa8,61□□□□□ -1,03
Suds3-201ENSMUST00000086471 Syne2Q6ZWQ0 6874 aaKnown RBP8,57□□□□□ -1,04
Suds3-201ENSMUST00000086471 Gm11596B1AQB0 205 aa8,52□□□□□ -1,05
Suds3-201ENSMUST00000086471 Gm9112A2AI92 75 aa8,51□□□□□ -1,05
Suds3-201ENSMUST00000086471 Gm11564A2A4L9 201 aa8,32□□□□□ -1,08
Suds3-201ENSMUST00000086471 Gm11563B1AQ90 168 aa8,32□□□□□ -1,08
Suds3-201ENSMUST00000086471 Gm11595B1AQA7 289 aa8,32□□□□□ -1,08
Suds3-201ENSMUST00000086471 Krtap4-8B1AQA8 209 aa8,32□□□□□ -1,08
Suds3-201ENSMUST00000086471 2310046K23RikA0A0A6YVW6 87 aa8,3□□□□□ -1,08
Suds3-201ENSMUST00000086471 Fsip2A2ARZ3 6995 aa8,27□□□□□ -1,09
Suds3-201ENSMUST00000086471 Mt4P47945 62 aa8,2□□□□□ -1,1
Suds3-201ENSMUST00000086471 Gm10272F7CZ33 110 aa8,19□□□□□ -1,1
Suds3-201ENSMUST00000086471 Krtap4-9B1AQA9 244 aa8,14□□□□□ -1,11
Suds3-201ENSMUST00000086471 Gm11562A0PK51 136 aa8,04□□□□□ -1,12
Suds3-201ENSMUST00000086471 Gm38119A0A0A6YX29 146 aa8,03□□□□□ -1,12
Suds3-201ENSMUST00000086471 Syne1Q6ZWR6 8799 aa7,93□□□□□ -1,14
Suds3-201ENSMUST00000086471 Krtap4-13Q9D7P3 165 aa7,89□□□□□ -1,15
Suds3-201ENSMUST00000086471 Lce1bQ9D149 137 aa7,88□□□□□ -1,15
Suds3-201ENSMUST00000086471 Lce1dQ9D731 133 aa7,82□□□□□ -1,16
Suds3-201ENSMUST00000086471 2300003K06RikA2A4M0 262 aa7,75□□□□□ -1,17
Suds3-201ENSMUST00000086471 Sprr2kO70562 68 aa7,67□□□□□ -1,18
Suds3-201ENSMUST00000086471 Lce1eQ9D139 143 aa7,62□□□□□ -1,19
Suds3-201ENSMUST00000086471 Gm11938Q9D3H4 131 aa7,6□□□□□ -1,19
Retrieved 100 of 22,080 RNA–protein pairs in 69,5 ms