RNA–Protein interactions for RNA: ENSMUST00000086471.11

Suds3-201, Transcript of Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Suds3, Length 2,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3-201ENSMUST00000086471 NischQ80TM9 1593 aa47,74■■■■■ 5,23
Suds3-201ENSMUST00000086471 Gm35339A0A140LHH9 1649 aa47,29■■■■■ 5,16
Suds3-201ENSMUST00000086471 Abcc9P70170 1546 aa46,28■■■■■ 5
Suds3-201ENSMUST00000086471 Abcc8B2RUS7 1588 aa45,62■■■■■ 4,89
Suds3-201ENSMUST00000086471 Rhox8Q6VSS7 320 aa43,38■■■■■ 4,53
Suds3-201ENSMUST00000086471 ScribQ80U72 1612 aa43,15■■■■■ 4,5
Suds3-201ENSMUST00000086471 Dcaf1Q80TR8 1506 aa42,11■■■■■ 4,33
Suds3-201ENSMUST00000086471 Kdm5dQ62240 1548 aa42,1■■■■■ 4,33
Suds3-201ENSMUST00000086471 Rb1cc1Q9ESK9 1588 aa41,78■■■■■ 4,28
Suds3-201ENSMUST00000086471 NacadQ5SWP3 1504 aa41,76■■■■■ 4,28
Suds3-201ENSMUST00000086471 Rtl1Q7M732 1744 aa41,3■■■■■ 4,2
Suds3-201ENSMUST00000086471 Baz1aO88379 1555 aa41,18■■■■■ 4,18
Suds3-201ENSMUST00000086471 Sycp2Q9CUU3 1500 aa40,93■■■■■ 4,14
Suds3-201ENSMUST00000086471 Ccdc180J3QNE4 1664 aa40,91■■■■■ 4,14
Suds3-201ENSMUST00000086471 Zcchc6Q5BLK4 1491 aaKnown RBP40,63■■■■■ 4,09
Suds3-201ENSMUST00000086471 Ccdc136Q3TVA9 1136 aa40,42■■■■■ 4,06
Suds3-201ENSMUST00000086471 Crybg2B7ZCC2 1516 aa40,41■■■■■ 4,06
Suds3-201ENSMUST00000086471 BicraF8VPZ9 1578 aa40,25■■■■■ 4,03
Suds3-201ENSMUST00000086471 Smarca2Q6DIC0 1577 aa40,18■■■■■ 4,02
Suds3-201ENSMUST00000086471 Cecr2E9Q2Z1 1453 aa39,69■■■■□ 3,94
Suds3-201ENSMUST00000086471 Trim41Q5NCC3 630 aa39,32■■■■□ 3,89
Suds3-201ENSMUST00000086471 Brd4Q9ESU6 1400 aaKnown RBP39,09■■■■□ 3,85
Suds3-201ENSMUST00000086471 Synj1Q8CHC4 1574 aa39,07■■■■□ 3,85
Suds3-201ENSMUST00000086471 Smarca4Q3TKT4 1613 aaKnown RBP38,94■■■■□ 3,82
Suds3-201ENSMUST00000086471 CftrP26361 1476 aa38,86■■■■□ 3,81
Suds3-201ENSMUST00000086471 Cngb1E1AZ71 1325 aa38,71■■■■□ 3,79
Suds3-201ENSMUST00000086471 HrcG5E8J6 738 aa38,7■■■■□ 3,79
Suds3-201ENSMUST00000086471 Cttnbp2B9EJA2 1648 aa38,64■■■■□ 3,78
Suds3-201ENSMUST00000086471 Iqgap2Q3UQ44 1575 aa38,58■■■■□ 3,77
Suds3-201ENSMUST00000086471 Esf1Q3V1V3 845 aaKnown RBP38,57■■■■□ 3,77
Suds3-201ENSMUST00000086471 Atad2bE9Q166 1460 aaKnown RBP38,54■■■■□ 3,76
Suds3-201ENSMUST00000086471 Pds5bQ4VA53 1446 aaKnown RBP38,51■■■■□ 3,76
Suds3-201ENSMUST00000086471 Golga3P55937 1487 aa38,43■■■■□ 3,74
Suds3-201ENSMUST00000086471 Chic1Q8CBW7 227 aa38,23■■■■□ 3,71
Suds3-201ENSMUST00000086471 Rsf1E9PWW9 1441 aaKnown RBP38,2■■■■□ 3,71
Suds3-201ENSMUST00000086471 Ccdc88bQ4QRL3 1481 aa38,15■■■■□ 3,7
Suds3-201ENSMUST00000086471 Top2bQ64511 1612 aa38,12■■■■□ 3,69
Suds3-201ENSMUST00000086471 Cep164Q5DU05 1446 aa38,04■■■■□ 3,68
Suds3-201ENSMUST00000086471 Frmpd1A2AKB4 1549 aa37,98■■■■□ 3,67
Suds3-201ENSMUST00000086471 Cc2d2aQ8CFW7 1633 aa37,95■■■■□ 3,67
Suds3-201ENSMUST00000086471 Wdr62Q3U3T8 1523 aa37,93■■■■□ 3,66
Suds3-201ENSMUST00000086471 Ercc6F8VPZ5 1481 aa37,85■■■■□ 3,65
Suds3-201ENSMUST00000086471 Gab3Q8BSM5 595 aa37,78■■■■□ 3,64
Suds3-201ENSMUST00000086471 Thoc2B1AZI6 1594 aaKnown RBP37,65■■■■□ 3,62
Suds3-201ENSMUST00000086471 Fmn1Q05860 1466 aa37,56■■■■□ 3,6
Suds3-201ENSMUST00000086471 Unc13aQ4KUS2 1712 aa37,55■■■■□ 3,6
Suds3-201ENSMUST00000086471 Ehmt2Q9Z148 1263 aaKnown RBP37,46■■■■□ 3,59
Suds3-201ENSMUST00000086471 Kif15Q6P9L6 1387 aa37,28■■■■□ 3,56
Suds3-201ENSMUST00000086471 TnnQ80Z71 1560 aa37,28■■■■□ 3,56
Suds3-201ENSMUST00000086471 Top2aQ01320 1528 aaKnown RBP37,27■■■■□ 3,56
Suds3-201ENSMUST00000086471 Phldb1Q6PDH0 1371 aaKnown RBP37,23■■■■□ 3,55
Suds3-201ENSMUST00000086471 Lamc3Q9R0B6 1581 aa37,21■■■■□ 3,55
Suds3-201ENSMUST00000086471 Dnajc5bQ9CQ94 199 aa37,2■■■■□ 3,55
Suds3-201ENSMUST00000086471 Il27Q8K3I6 234 aa37,12■■■■□ 3,53
Suds3-201ENSMUST00000086471 Ubl4bQ9CQ84 188 aa37,09■■■■□ 3,53
Suds3-201ENSMUST00000086471 Fam135aQ6NS59 1506 aa37,07■■■■□ 3,52
Suds3-201ENSMUST00000086471 Rapgef2Q8CHG7 1496 aa36,88■■■■□ 3,49
Suds3-201ENSMUST00000086471 Camsap1A2AHC3 1581 aa36,85■■■■□ 3,49
Suds3-201ENSMUST00000086471 Cux2P70298 1426 aa36,84■■■■□ 3,49
Suds3-201ENSMUST00000086471 Npm2Q80W85 207 aa36,75■■■■□ 3,47
Suds3-201ENSMUST00000086471 PtprkP35822 1457 aa36,71■■■■□ 3,47
Suds3-201ENSMUST00000086471 Ccdc18Q640L5 1455 aa36,68■■■■□ 3,46
Suds3-201ENSMUST00000086471 Myt1lP97500 1187 aa36,65■■■■□ 3,46
Suds3-201ENSMUST00000086471 Cep162Q6ZQ06 1403 aa36,64■■■■□ 3,46
Suds3-201ENSMUST00000086471 Npm1Q61937 292 aaKnown RBP36,57■■■■□ 3,45
Suds3-201ENSMUST00000086471 Grin2bQ01097 1482 aa36,52■■■■□ 3,44
Suds3-201ENSMUST00000086471 Shroom4Q1W617 1475 aa36,42■■■■□ 3,42
Suds3-201ENSMUST00000086471 Eif4g1Q6NZJ6 1600 aaKnown RBP36,41■■■■□ 3,42
Suds3-201ENSMUST00000086471 NrkQ9R0G8 1455 aa36,38■■■■□ 3,41
Suds3-201ENSMUST00000086471 Arhgap35Q91YM2 1499 aa36,34■■■■□ 3,41
Suds3-201ENSMUST00000086471 Mrc2Q64449 1479 aa36,33■■■■□ 3,41
Suds3-201ENSMUST00000086471 LrpprcQ6PB66 1392 aaKnown RBP36,33■■■■□ 3,41
Suds3-201ENSMUST00000086471 Zeb1Q64318 1117 aa36,24■■■■□ 3,39
Suds3-201ENSMUST00000086471 Acin1Q9JIX8 1338 aaKnown RBP36,23■■■■□ 3,39
Suds3-201ENSMUST00000086471 PogzQ8BZH4 1409 aaKnown RBP36,22■■■■□ 3,39
Suds3-201ENSMUST00000086471 Kif21aQ9QXL2 1672 aa36,19■■■■□ 3,38
Suds3-201ENSMUST00000086471 Dhx29Q6PGC1 1365 aaKnown RBP36,18■■■■□ 3,38
Suds3-201ENSMUST00000086471 Duox2A2AQ99 1517 aa36,17■■■■□ 3,38
Suds3-201ENSMUST00000086471 Baz1bQ9Z277 1479 aa36,13■■■■□ 3,37
Suds3-201ENSMUST00000086471 Efcab5A0JP43 1406 aa36,03■■■■□ 3,36
Suds3-201ENSMUST00000086471 Mroh2bQ7M6Y6 1581 aa36,02■■■■□ 3,36
Suds3-201ENSMUST00000086471 Samd9lQ69Z37 1561 aa36■■■■□ 3,35
Suds3-201ENSMUST00000086471 Map3k1P53349 1493 aa35,94■■■■□ 3,34
Suds3-201ENSMUST00000086471 Clip1Q922J3 1391 aa35,93■■■■□ 3,34
Suds3-201ENSMUST00000086471 Crocc2F6XLV1 1638 aa35,92■■■■□ 3,34
Suds3-201ENSMUST00000086471 Rad54l2Q99NG0 1466 aa35,87■■■■□ 3,33
Suds3-201ENSMUST00000086471 Ap3b1Q9Z1T1 1105 aa35,85■■■■□ 3,33
Suds3-201ENSMUST00000086471 Plb1Q3TTY0 1478 aa35,78■■■■□ 3,32
Suds3-201ENSMUST00000086471 Plekhg3Q4VAC9 1341 aa35,78■■■■□ 3,32
Suds3-201ENSMUST00000086471 UbtfP25976 765 aaKnown RBP35,75■■■■□ 3,31
Suds3-201ENSMUST00000086471 Rpgrip1Q9EPQ2 1331 aa35,74■■■■□ 3,31
Suds3-201ENSMUST00000086471 Arap1Q4LDD4 1452 aa35,72■■■■□ 3,31
Suds3-201ENSMUST00000086471 SynmQ70IV5 1561 aa35,72■■■■□ 3,31
Suds3-201ENSMUST00000086471 Setd5Q5XJV7 1441 aa35,71■■■■□ 3,31
Suds3-201ENSMUST00000086471 Eea1Q8BL66 1411 aa35,7■■■■□ 3,3
Suds3-201ENSMUST00000086471 Urb2E9Q7L1 1524 aaKnown RBP35,69■■■■□ 3,3
Suds3-201ENSMUST00000086471 AqrQ8CFQ3 1481 aaKnown RBP35,67■■■■□ 3,3
Suds3-201ENSMUST00000086471 Carmil1Q6EDY6 1374 aa35,64■■■■□ 3,3
Suds3-201ENSMUST00000086471 Ankrd26Q811D2 1581 aa35,62■■■■□ 3,29
Suds3-201ENSMUST00000086471 Cux1P53564 1515 aa35,61■■■■□ 3,29
Retrieved 100 of 22,080 RNA–protein pairs in 11,9 ms