RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Herc1E9PZP8 4859 aa6.28□□□□□ -1.4
Lig3-202ENSMUST00000080461 Gm10382Q3V0T5 144 aa6.26□□□□□ -1.41
Lig3-202ENSMUST00000080461 Gm10318A0A1W2P728 225 aa6.23□□□□□ -1.41
Lig3-202ENSMUST00000080461 1700042G07RikB1AUF7 90 aa6.22□□□□□ -1.41
Lig3-202ENSMUST00000080461 2210017I01RikA0A0A6YVV1 95 aa6.2□□□□□ -1.42
Lig3-202ENSMUST00000080461 Crct1Q6PAI5 102 aa6.19□□□□□ -1.42
Lig3-202ENSMUST00000080461 Gm17606F6ZL36 78 aa6.19□□□□□ -1.42
Lig3-202ENSMUST00000080461 Krtap3-1A2A591 98 aa6.15□□□□□ -1.42
Lig3-202ENSMUST00000080461 Gm20537G3UYK7 97 aa6.15□□□□□ -1.42
Lig3-202ENSMUST00000080461 Gm3880A0A1B0GSB3 72 aa6.11□□□□□ -1.43
Lig3-202ENSMUST00000080461 Krtap13-1Q8K198 168 aa6.1□□□□□ -1.43
Lig3-202ENSMUST00000080461 Gm18596A0A1W2P860 280 aa6.06□□□□□ -1.44
Lig3-202ENSMUST00000080461 Krtap16-3Q8C1I6 86 aa6.06□□□□□ -1.44
Lig3-202ENSMUST00000080461 Ubr4A2AN08 5180 aa6.04□□□□□ -1.44
Lig3-202ENSMUST00000080461 Ush2AQ2QI47 5193 aa6.03□□□□□ -1.44
Lig3-202ENSMUST00000080461 Krtap1-5A2A590 122 aa6.01□□□□□ -1.45
Lig3-202ENSMUST00000080461 Fam229aB2KGE5 128 aa6.01□□□□□ -1.45
Lig3-202ENSMUST00000080461 Krtap19-1Q925H2 87 aa6.01□□□□□ -1.45
Lig3-202ENSMUST00000080461 Gm9955Q8CEJ8 102 aa6□□□□□ -1.45
Lig3-202ENSMUST00000080461 Pla2g10Q9QXX3 151 aa6□□□□□ -1.45
Lig3-202ENSMUST00000080461 Gm9789Q8BIG3 52 aa5.99□□□□□ -1.45
Lig3-202ENSMUST00000080461 Hmcn2A2AJ76 5100 aa5.99□□□□□ -1.45
Lig3-202ENSMUST00000080461 Krtap19-3Q925H6 87 aa5.97□□□□□ -1.45
Lig3-202ENSMUST00000080461 Prm1P02319 51 aa5.97□□□□□ -1.45
Lig3-202ENSMUST00000080461 Krtap1-3A2A588 173 aa5.92□□□□□ -1.46
Lig3-202ENSMUST00000080461 Gm7735D3YX18 52 aa5.92□□□□□ -1.46
Lig3-202ENSMUST00000080461 ZanO88799 5376 aa5.91□□□□□ -1.46
Lig3-202ENSMUST00000080461 CriptO70333 101 aa5.9□□□□□ -1.46
Lig3-202ENSMUST00000080461 BC029722A0A0N4SW31 51 aa5.88□□□□□ -1.47
Lig3-202ENSMUST00000080461 Gm19402J3QJV4 266 aa5.85□□□□□ -1.47
Lig3-202ENSMUST00000080461 Fat4Q2PZL6 4981 aa5.83□□□□□ -1.48
Lig3-202ENSMUST00000080461 4932415D10RikA0A1W2P6U8 4986 aa5.82□□□□□ -1.48
Lig3-202ENSMUST00000080461 Krtap1-4Q3V2D6 188 aa5.74□□□□□ -1.49
Lig3-202ENSMUST00000080461 Gm19426M0QWC7 77 aa5.73□□□□□ -1.49
Lig3-202ENSMUST00000080461 LorP18165 486 aa5.73□□□□□ -1.49
Lig3-202ENSMUST00000080461 Gm12216A0A1W2P827 62 aa5.72□□□□□ -1.49
Lig3-202ENSMUST00000080461 Gm21887J3QQ04 176 aa5.71□□□□□ -1.49
Lig3-202ENSMUST00000080461 Spink7Q6IE32 76 aa5.71□□□□□ -1.5
Lig3-202ENSMUST00000080461 B930094E09RikQ8C4T2 136 aa5.71□□□□□ -1.5
Lig3-202ENSMUST00000080461 Rnf213E9Q555 5152 aaKnown RBP5.68□□□□□ -1.5
Lig3-202ENSMUST00000080461 Gm17402F6Z0L5 76 aa5.67□□□□□ -1.5
Lig3-202ENSMUST00000080461 Romo1P60603 79 aa5.66□□□□□ -1.5
Lig3-202ENSMUST00000080461 Sprr2a3Q4KL71 83 aa5.56□□□□□ -1.52
Lig3-202ENSMUST00000080461 Sprr2a1Q9CQK8 83 aa5.56□□□□□ -1.52
Lig3-202ENSMUST00000080461 Lce1jD3YUU5 139 aa5.54□□□□□ -1.52
Lig3-202ENSMUST00000080461 Prm2P07978 107 aa5.51□□□□□ -1.53
Lig3-202ENSMUST00000080461 Krtap17-1A2A5X6 109 aa5.5□□□□□ -1.53
Lig3-202ENSMUST00000080461 Krtap12-1Q9Z287 130 aa5.48□□□□□ -1.53
Lig3-202ENSMUST00000080461 SspoQ8CG65 4998 aa5.46□□□□□ -1.54
Lig3-202ENSMUST00000080461 Krtap19-9aF8WH65 55 aa5.42□□□□□ -1.54
Lig3-202ENSMUST00000080461 Gm10061D3Z714 54 aa5.35□□□□□ -1.55
Lig3-202ENSMUST00000080461 Krtap19-2Q925I0 141 aa5.32□□□□□ -1.56
Lig3-202ENSMUST00000080461 Gm20538F6Z9R1 75 aa5.29□□□□□ -1.56
Lig3-202ENSMUST00000080461 Camk2n1Q6QWF9 78 aa5.28□□□□□ -1.56
Lig3-202ENSMUST00000080461 Krtap9-5A2A5X3 358 aa5.27□□□□□ -1.57
Lig3-202ENSMUST00000080461 Mp68P56379 58 aa5.27□□□□□ -1.57
Lig3-202ENSMUST00000080461 Gm19668J3QMD1 248 aa5.26□□□□□ -1.57
Lig3-202ENSMUST00000080461 Krtap7-1Q9D3I6 87 aa5.23□□□□□ -1.57
Lig3-202ENSMUST00000080461 Lce1iQ9D6P5 149 aa5.17□□□□□ -1.58
Lig3-202ENSMUST00000080461 Lce1a2Q9D1K4 149 aa5.13□□□□□ -1.59
Lig3-202ENSMUST00000080461 Gm40193A0A1B0GT39 78 aa5.1□□□□□ -1.59
Lig3-202ENSMUST00000080461 Muc5bE9Q5I3 4800 aa5.07□□□□□ -1.6
Lig3-202ENSMUST00000080461 Gm11569B1AQB1 180 aa5.07□□□□□ -1.6
Lig3-202ENSMUST00000080461 Gm6358A0A087WPH4 74 aa5.03□□□□□ -1.6
Lig3-202ENSMUST00000080461 Krtap8-1O08633 61 aa4.99□□□□□ -1.61
Lig3-202ENSMUST00000080461 Krtap19-9bQ99NG9 58 aa4.93□□□□□ -1.62
Lig3-202ENSMUST00000080461 Ndufaf8A2AMZ4 74 aa4.92□□□□□ -1.62
Lig3-202ENSMUST00000080461 Mdn1A2ANY6 5589 aaKnown RBP4.92□□□□□ -1.62
Lig3-202ENSMUST00000080461 Mt2P02798 61 aa4.91□□□□□ -1.62
Lig3-202ENSMUST00000080461 Krtap9-3Q3V2C1 136 aa4.86□□□□□ -1.63
Lig3-202ENSMUST00000080461 Tnp1P10856 55 aa4.79□□□□□ -1.64
Lig3-202ENSMUST00000080461 Lce1hQ9D6R3 140 aa4.76□□□□□ -1.65
Lig3-202ENSMUST00000080461 Gm9112A2AI92 75 aa4.67□□□□□ -1.66
Lig3-202ENSMUST00000080461 Gm11555B1AQ89 175 aa4.67□□□□□ -1.66
Lig3-202ENSMUST00000080461 Krtap22-2J3QNX6 67 aa4.64□□□□□ -1.67
Lig3-202ENSMUST00000080461 Lce1gQ9D195 139 aa4.64□□□□□ -1.67
Lig3-202ENSMUST00000080461 Krtap4-2B1AQ85 167 aa4.61□□□□□ -1.67
Lig3-202ENSMUST00000080461 Krtap4-6Q3V4B7 195 aa4.61□□□□□ -1.67
Lig3-202ENSMUST00000080461 2310046K23RikA0A0A6YVW6 87 aa4.53□□□□□ -1.68
Lig3-202ENSMUST00000080461 Krtap4-1Q3UUY3 169 aa4.52□□□□□ -1.69
Lig3-202ENSMUST00000080461 Gm11596B1AQB0 205 aa4.5□□□□□ -1.69
Lig3-202ENSMUST00000080461 Syne2Q6ZWQ0 6874 aaKnown RBP4.47□□□□□ -1.69
Lig3-202ENSMUST00000080461 Gm11562A0PK51 136 aa4.45□□□□□ -1.7
Lig3-202ENSMUST00000080461 Gm10272F7CZ33 110 aa4.39□□□□□ -1.71
Lig3-202ENSMUST00000080461 Gm11564A2A4L9 201 aa4.39□□□□□ -1.71
Lig3-202ENSMUST00000080461 Gm11563B1AQ90 168 aa4.39□□□□□ -1.71
Lig3-202ENSMUST00000080461 Gm11595B1AQA7 289 aa4.39□□□□□ -1.71
Lig3-202ENSMUST00000080461 Krtap4-8B1AQA8 209 aa4.39□□□□□ -1.71
Lig3-202ENSMUST00000080461 Fsip2A2ARZ3 6995 aa4.32□□□□□ -1.72
Lig3-202ENSMUST00000080461 Lce1dQ9D731 133 aa4.3□□□□□ -1.72
Lig3-202ENSMUST00000080461 Mt4P47945 62 aa4.28□□□□□ -1.72
Lig3-202ENSMUST00000080461 Krtap4-9B1AQA9 244 aa4.27□□□□□ -1.73
Lig3-202ENSMUST00000080461 Lce1bQ9D149 137 aa4.27□□□□□ -1.73
Lig3-202ENSMUST00000080461 Syne1Q6ZWR6 8799 aa4.21□□□□□ -1.74
Lig3-202ENSMUST00000080461 Gm38119A0A0A6YX29 146 aa4.19□□□□□ -1.74
Lig3-202ENSMUST00000080461 Lce1eQ9D139 143 aa4.17□□□□□ -1.74
Lig3-202ENSMUST00000080461 Gm11938Q9D3H4 131 aa4.14□□□□□ -1.75
Lig3-202ENSMUST00000080461 Krtap4-13Q9D7P3 165 aa4.11□□□□□ -1.75
Lig3-202ENSMUST00000080461 Lce1cQ9D1C5 147 aa4.09□□□□□ -1.75
Lig3-202ENSMUST00000080461 Sprr2gO70558 76 aa4.07□□□□□ -1.76
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms