RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Romo1P60603 79 aa5.49□□□□□ -1.53
Col9a1-201ENSMUST00000054588 Vps13bQ80TY5 3993 aa5.48□□□□□ -1.53
Col9a1-201ENSMUST00000054588 Gm17416Q30KP4 66 aa5.47□□□□□ -1.53
Col9a1-201ENSMUST00000054588 BC029722A0A0N4SW31 51 aa5.46□□□□□ -1.54
Col9a1-201ENSMUST00000054588 Kiaa1109A2AAE1 5005 aa5.44□□□□□ -1.54
Col9a1-201ENSMUST00000054588 Pkhd1l1Q80ZA4 4249 aa5.43□□□□□ -1.54
Col9a1-201ENSMUST00000054588 Gm19426M0QWC7 77 aa5.41□□□□□ -1.54
Col9a1-201ENSMUST00000054588 Lrp2A2ARV4 4660 aa5.38□□□□□ -1.55
Col9a1-201ENSMUST00000054588 Gm20538F6Z9R1 75 aa5.37□□□□□ -1.55
Col9a1-201ENSMUST00000054588 Krtap3-1A2A591 98 aa5.36□□□□□ -1.55
Col9a1-201ENSMUST00000054588 Herc2Q4U2R1 4836 aa5.36□□□□□ -1.55
Col9a1-201ENSMUST00000054588 2210017I01RikA0A0A6YVV1 95 aa5.35□□□□□ -1.55
Col9a1-201ENSMUST00000054588 Abca13Q5SSE9 5034 aa5.32□□□□□ -1.56
Col9a1-201ENSMUST00000054588 Camk2n1Q6QWF9 78 aa5.24□□□□□ -1.57
Col9a1-201ENSMUST00000054588 Gm21887J3QQ04 176 aa5.23□□□□□ -1.57
Col9a1-201ENSMUST00000054588 B930094E09RikQ8C4T2 136 aa5.23□□□□□ -1.57
Col9a1-201ENSMUST00000054588 Krtap13-1Q8K198 168 aa5.22□□□□□ -1.57
Col9a1-201ENSMUST00000054588 Ryr2E9Q401 4966 aaKnown RBP5.2□□□□□ -1.58
Col9a1-201ENSMUST00000054588 Kmt2cQ8BRH4 4903 aa5.18□□□□□ -1.58
Col9a1-201ENSMUST00000054588 Dnah8Q91XQ0 4731 aa5.15□□□□□ -1.58
Col9a1-201ENSMUST00000054588 Gm17402F6Z0L5 76 aa5.15□□□□□ -1.59
Col9a1-201ENSMUST00000054588 PcloQ9QYX7 5068 aa5.12□□□□□ -1.59
Col9a1-201ENSMUST00000054588 Prm2P07978 107 aa5.11□□□□□ -1.59
Col9a1-201ENSMUST00000054588 Ndufaf8A2AMZ4 74 aa5.09□□□□□ -1.59
Col9a1-201ENSMUST00000054588 Dnhd1D3Z2X2 4750 aa5.05□□□□□ -1.6
Col9a1-201ENSMUST00000054588 Gm40193A0A1B0GT39 78 aa5.02□□□□□ -1.61
Col9a1-201ENSMUST00000054588 Krtap1-5A2A590 122 aa5.01□□□□□ -1.61
Col9a1-201ENSMUST00000054588 Herc1E9PZP8 4859 aa4.96□□□□□ -1.62
Col9a1-201ENSMUST00000054588 LorP18165 486 aa4.95□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Krtap7-1Q9D3I6 87 aa4.95□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Gm18596A0A1W2P860 280 aa4.93□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Ubr4A2AN08 5180 aa4.93□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Sprr2a3Q4KL71 83 aa4.91□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Sprr2a1Q9CQK8 83 aa4.91□□□□□ -1.62
Col9a1-201ENSMUST00000054588 Gm19402J3QJV4 266 aa4.88□□□□□ -1.63
Col9a1-201ENSMUST00000054588 Birc6O88738 4882 aa4.82□□□□□ -1.64
Col9a1-201ENSMUST00000054588 Gm9112A2AI92 75 aa4.81□□□□□ -1.64
Col9a1-201ENSMUST00000054588 Krtap16-3Q8C1I6 86 aa4.78□□□□□ -1.64
Col9a1-201ENSMUST00000054588 Lce1mQ9CR91 182 aa4.75□□□□□ -1.65
Col9a1-201ENSMUST00000054588 Fat4Q2PZL6 4981 aa4.72□□□□□ -1.65
Col9a1-201ENSMUST00000054588 Krtap19-3Q925H6 87 aa4.71□□□□□ -1.65
Col9a1-201ENSMUST00000054588 Krtap19-1Q925H2 87 aa4.7□□□□□ -1.66
Col9a1-201ENSMUST00000054588 Gm19668J3QMD1 248 aa4.69□□□□□ -1.66
Col9a1-201ENSMUST00000054588 Krtap1-4Q3V2D6 188 aa4.69□□□□□ -1.66
Col9a1-201ENSMUST00000054588 ZanO88799 5376 aa4.66□□□□□ -1.66
Col9a1-201ENSMUST00000054588 Tnp1P10856 55 aa4.64□□□□□ -1.67
Col9a1-201ENSMUST00000054588 Ush2AQ2QI47 5193 aa4.61□□□□□ -1.67
Col9a1-201ENSMUST00000054588 Mdn1A2ANY6 5589 aaKnown RBP4.6□□□□□ -1.67
Col9a1-201ENSMUST00000054588 4932415D10RikA0A1W2P6U8 4986 aa4.6□□□□□ -1.67
Col9a1-201ENSMUST00000054588 Hmcn2A2AJ76 5100 aa4.59□□□□□ -1.67
Col9a1-201ENSMUST00000054588 Rnf213E9Q555 5152 aaKnown RBP4.58□□□□□ -1.68
Col9a1-201ENSMUST00000054588 Krtap12-1Q9Z287 130 aa4.54□□□□□ -1.68
Col9a1-201ENSMUST00000054588 Krtap1-3A2A588 173 aa4.53□□□□□ -1.68
Col9a1-201ENSMUST00000054588 Krtap19-9aF8WH65 55 aa4.51□□□□□ -1.69
Col9a1-201ENSMUST00000054588 Lce1jD3YUU5 139 aa4.5□□□□□ -1.69
Col9a1-201ENSMUST00000054588 Krtap9-5A2A5X3 358 aa4.42□□□□□ -1.7
Col9a1-201ENSMUST00000054588 Krtap17-1A2A5X6 109 aa4.41□□□□□ -1.7
Col9a1-201ENSMUST00000054588 Gm7735D3YX18 52 aa4.35□□□□□ -1.71
Col9a1-201ENSMUST00000054588 Gm9789Q8BIG3 52 aa4.32□□□□□ -1.72
Col9a1-201ENSMUST00000054588 Krtap8-1O08633 61 aa4.31□□□□□ -1.72
Col9a1-201ENSMUST00000054588 Prm1P02319 51 aa4.31□□□□□ -1.72
Col9a1-201ENSMUST00000054588 Gm6358A0A087WPH4 74 aa4.28□□□□□ -1.72
Col9a1-201ENSMUST00000054588 Krtap19-9bQ99NG9 58 aa4.27□□□□□ -1.73
Col9a1-201ENSMUST00000054588 Krtap19-2Q925I0 141 aa4.26□□□□□ -1.73
Col9a1-201ENSMUST00000054588 2310046K23RikA0A0A6YVW6 87 aa4.25□□□□□ -1.73
Col9a1-201ENSMUST00000054588 Lce1iQ9D6P5 149 aa4.13□□□□□ -1.75
Col9a1-201ENSMUST00000054588 Mt2P02798 61 aa4.12□□□□□ -1.75
Col9a1-201ENSMUST00000054588 Gm10061D3Z714 54 aa4.12□□□□□ -1.75
Col9a1-201ENSMUST00000054588 Lce1a2Q9D1K4 149 aa4.1□□□□□ -1.75
Col9a1-201ENSMUST00000054588 Fsip2A2ARZ3 6995 aa4.05□□□□□ -1.76
Col9a1-201ENSMUST00000054588 Syne1Q6ZWR6 8799 aa4.04□□□□□ -1.76
Col9a1-201ENSMUST00000054588 Gm11569B1AQB1 180 aa4□□□□□ -1.77
Col9a1-201ENSMUST00000054588 Krtap9-3Q3V2C1 136 aa3.98□□□□□ -1.77
Col9a1-201ENSMUST00000054588 SspoQ8CG65 4998 aa3.97□□□□□ -1.77
Col9a1-201ENSMUST00000054588 Gm10272F7CZ33 110 aa3.96□□□□□ -1.78
Col9a1-201ENSMUST00000054588 Lce1hQ9D6R3 140 aa3.95□□□□□ -1.78
Col9a1-201ENSMUST00000054588 Muc16A0A140LJ72 8478 aa3.93□□□□□ -1.78
Col9a1-201ENSMUST00000054588 Krtap22-2J3QNX6 67 aa3.91□□□□□ -1.78
Col9a1-201ENSMUST00000054588 Sprr2kO70562 68 aa3.91□□□□□ -1.78
Col9a1-201ENSMUST00000054588 4933428G20RikQ9D3X4 101 aa3.89□□□□□ -1.79
Col9a1-201ENSMUST00000054588 Gm38119A0A0A6YX29 146 aa3.87□□□□□ -1.79
Col9a1-201ENSMUST00000054588 Krtap4-6Q3V4B7 195 aa3.82□□□□□ -1.8
Col9a1-201ENSMUST00000054588 Sprr2gO70558 76 aa3.78□□□□□ -1.8
Col9a1-201ENSMUST00000054588 Muc5bE9Q5I3 4800 aa3.77□□□□□ -1.81
Col9a1-201ENSMUST00000054588 Syne2Q6ZWQ0 6874 aaKnown RBP3.76□□□□□ -1.81
Col9a1-201ENSMUST00000054588 Lce1dQ9D731 133 aa3.72□□□□□ -1.81
Col9a1-201ENSMUST00000054588 Mt4P47945 62 aa3.7□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Lce3bQ9CQM7 98 aa3.7□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Krtap4-2B1AQ85 167 aa3.7□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Sprr2dO70555 85 aa3.69□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Macf1Q9QXZ0 7354 aaKnown RBP3.66□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Krtap4-1Q3UUY3 169 aa3.66□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Gm11938Q9D3H4 131 aa3.65□□□□□ -1.82
Col9a1-201ENSMUST00000054588 Gm10100J3QK64 120 aa3.64□□□□□ -1.83
Col9a1-201ENSMUST00000054588 Lce3cQ91V05 98 aa3.63□□□□□ -1.83
Col9a1-201ENSMUST00000054588 Lce1gQ9D195 139 aa3.6□□□□□ -1.83
Col9a1-201ENSMUST00000054588 Lce1eQ9D139 143 aa3.6□□□□□ -1.83
Col9a1-201ENSMUST00000054588 Gm11562A0PK51 136 aa3.55□□□□□ -1.84
Col9a1-201ENSMUST00000054588 Krtap4-9B1AQA9 244 aa3.55□□□□□ -1.84
Col9a1-201ENSMUST00000054588 Lce3eF8VQJ0 98 aa3.54□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms