RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 H2al1kJ3QP08 105 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Gm10643Q3URG9 111 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 H2al1eQ810S6 105 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Q8BGJ3 129 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 H2al1mQ9DAD9 105 aa10.59□□□□□ -0.71
Ssbp4-201ENSMUST00000049908 Gm10999F6Q4M4 69 aa10.57□□□□□ -0.72
Ssbp4-201ENSMUST00000049908 Gm10160F6Y577 67 aa10.57□□□□□ -0.72
Ssbp4-201ENSMUST00000049908 Gm11569B1AQB1 180 aa10.54□□□□□ -0.72
Ssbp4-201ENSMUST00000049908 Phxr4P15974 95 aa10.53□□□□□ -0.72
Ssbp4-201ENSMUST00000049908 SspoQ8CG65 4998 aa10.52□□□□□ -0.73
Ssbp4-201ENSMUST00000049908 Defb38Q7TNV7 63 aa10.51□□□□□ -0.73
Ssbp4-201ENSMUST00000049908 9230102O04RikA2ASX7 82 aa10.49□□□□□ -0.73
Ssbp4-201ENSMUST00000049908 Sox16Q62247 57 aa10.46□□□□□ -0.74
Ssbp4-201ENSMUST00000049908 Krtap17-1A2A5X6 109 aa10.44□□□□□ -0.74
Ssbp4-201ENSMUST00000049908 Gm21798J3QNU5 87 aa10.4□□□□□ -0.74
Ssbp4-201ENSMUST00000049908 4930507D05RikQ8C9C9 103 aa10.38□□□□□ -0.75
Ssbp4-201ENSMUST00000049908 2310079G19RikQ9D6L6 185 aa10.38□□□□□ -0.75
Ssbp4-201ENSMUST00000049908 Krtap4-2B1AQ85 167 aa10.34□□□□□ -0.75
Ssbp4-201ENSMUST00000049908 Krtap13-1Q8K198 168 aa10.32□□□□□ -0.76
Ssbp4-201ENSMUST00000049908 2210017I01RikA0A0A6YVV1 95 aa10.27□□□□□ -0.77
Ssbp4-201ENSMUST00000049908 4933415A04RikQ9D443 101 aa10.26□□□□□ -0.77
Ssbp4-201ENSMUST00000049908 Gm20661K7N787 53 aa10.25□□□□□ -0.77
Ssbp4-201ENSMUST00000049908 Ndufb1P0DN34 57 aa10.23□□□□□ -0.77
Ssbp4-201ENSMUST00000049908 Limd2Q8BGB5 128 aa10.2□□□□□ -0.78
Ssbp4-201ENSMUST00000049908 Lce1gQ9D195 139 aa10.19□□□□□ -0.78
Ssbp4-201ENSMUST00000049908 Krtap1-5A2A590 122 aa10.17□□□□□ -0.78
Ssbp4-201ENSMUST00000049908 Uqcr11Q9CPX8 56 aa10.17□□□□□ -0.78
Ssbp4-201ENSMUST00000049908 Defb1P56386 69 aa10.05□□□□□ -0.8
Ssbp4-201ENSMUST00000049908 Krtap3-1A2A591 98 aa9.98□□□□□ -0.81
Ssbp4-201ENSMUST00000049908 B930094E09RikQ8C4T2 136 aa9.98□□□□□ -0.81
Ssbp4-201ENSMUST00000049908 Cox6b2Q80ZN9 88 aa9.95□□□□□ -0.82
Ssbp4-201ENSMUST00000049908 SptssbQ925E8 76 aa9.95□□□□□ -0.82
Ssbp4-201ENSMUST00000049908 Syne2Q6ZWQ0 6874 aaKnown RBP9.95□□□□□ -0.82
Ssbp4-201ENSMUST00000049908 Gm11555B1AQ89 175 aa9.94□□□□□ -0.82
Ssbp4-201ENSMUST00000049908 Muc5bE9Q5I3 4800 aa9.83□□□□□ -0.84
Ssbp4-201ENSMUST00000049908 Gm17606F6ZL36 78 aa9.81□□□□□ -0.84
Ssbp4-201ENSMUST00000049908 Krtap19-2Q925I0 141 aa9.81□□□□□ -0.84
Ssbp4-201ENSMUST00000049908 Krtap9-5A2A5X3 358 aa9.8□□□□□ -0.84
Ssbp4-201ENSMUST00000049908 Gm11596B1AQB0 205 aa9.79□□□□□ -0.84
Ssbp4-201ENSMUST00000049908 Gm3646F6S692 53 aa9.77□□□□□ -0.85
Ssbp4-201ENSMUST00000049908 Gm19426M0QWC7 77 aa9.76□□□□□ -0.85
Ssbp4-201ENSMUST00000049908 Lce1jD3YUU5 139 aa9.71□□□□□ -0.86
Ssbp4-201ENSMUST00000049908 Krtap12-1Q9Z287 130 aa9.7□□□□□ -0.86
Ssbp4-201ENSMUST00000049908 Krtap4-6Q3V4B7 195 aa9.69□□□□□ -0.86
Ssbp4-201ENSMUST00000049908 Gm10382Q3V0T5 144 aa9.65□□□□□ -0.87
Ssbp4-201ENSMUST00000049908 Mdn1A2ANY6 5589 aaKnown RBP9.63□□□□□ -0.87
Ssbp4-201ENSMUST00000049908 BC029722A0A0N4SW31 51 aa9.63□□□□□ -0.87
Ssbp4-201ENSMUST00000049908 Gm20537G3UYK7 97 aa9.61□□□□□ -0.87
Ssbp4-201ENSMUST00000049908 Sec61gP60060 68 aa9.52□□□□□ -0.89
Ssbp4-201ENSMUST00000049908 Pla2g10Q9QXX3 151 aa9.52□□□□□ -0.89
Ssbp4-201ENSMUST00000049908 Krtap4-1Q3UUY3 169 aa9.51□□□□□ -0.89
Ssbp4-201ENSMUST00000049908 Krtap19-9aF8WH65 55 aa9.45□□□□□ -0.9
Ssbp4-201ENSMUST00000049908 Prm2P07978 107 aa9.42□□□□□ -0.9
Ssbp4-201ENSMUST00000049908 Ndufs5Q99LY9 106 aa9.42□□□□□ -0.9
Ssbp4-201ENSMUST00000049908 Gm6358A0A087WPH4 74 aa9.4□□□□□ -0.91
Ssbp4-201ENSMUST00000049908 CriptO70333 101 aa9.38□□□□□ -0.91
Ssbp4-201ENSMUST00000049908 Gm11564A2A4L9 201 aa9.3□□□□□ -0.92
Ssbp4-201ENSMUST00000049908 Gm11563B1AQ90 168 aa9.3□□□□□ -0.92
Ssbp4-201ENSMUST00000049908 Gm11595B1AQA7 289 aa9.3□□□□□ -0.92
Ssbp4-201ENSMUST00000049908 Krtap4-8B1AQA8 209 aa9.3□□□□□ -0.92
Ssbp4-201ENSMUST00000049908 Spink7Q6IE32 76 aa9.3□□□□□ -0.92
Ssbp4-201ENSMUST00000049908 Gm9955Q8CEJ8 102 aa9.24□□□□□ -0.93
Ssbp4-201ENSMUST00000049908 Lce1iQ9D6P5 149 aa9.09□□□□□ -0.95
Ssbp4-201ENSMUST00000049908 Krtap4-9B1AQA9 244 aa9.02□□□□□ -0.97
Ssbp4-201ENSMUST00000049908 Gm17402F6Z0L5 76 aa8.97□□□□□ -0.97
Ssbp4-201ENSMUST00000049908 Sprr2a3Q4KL71 83 aa8.97□□□□□ -0.97
Ssbp4-201ENSMUST00000049908 Sprr2a1Q9CQK8 83 aa8.97□□□□□ -0.97
Ssbp4-201ENSMUST00000049908 Gm3880A0A1B0GSB3 72 aa8.93□□□□□ -0.98
Ssbp4-201ENSMUST00000049908 Lce1a2Q9D1K4 149 aa8.93□□□□□ -0.98
Ssbp4-201ENSMUST00000049908 Mt2P02798 61 aa8.91□□□□□ -0.98
Ssbp4-201ENSMUST00000049908 Mt4P47945 62 aa8.88□□□□□ -0.99
Ssbp4-201ENSMUST00000049908 Fsip2A2ARZ3 6995 aa8.85□□□□□ -0.99
Ssbp4-201ENSMUST00000049908 Krtap9-3Q3V2C1 136 aa8.8□□□□□ -1
Ssbp4-201ENSMUST00000049908 Krtap8-1O08633 61 aa8.77□□□□□ -1.01
Ssbp4-201ENSMUST00000049908 Romo1P60603 79 aa8.71□□□□□ -1.01
Ssbp4-201ENSMUST00000049908 Gm12216A0A1W2P827 62 aa8.7□□□□□ -1.02
Ssbp4-201ENSMUST00000049908 Krtap4-13Q9D7P3 165 aa8.68□□□□□ -1.02
Ssbp4-201ENSMUST00000049908 Krtap6-3A0A087WQL6 57 aa8.63□□□□□ -1.03
Ssbp4-201ENSMUST00000049908 Lce1bQ9D149 137 aa8.6□□□□□ -1.03
Ssbp4-201ENSMUST00000049908 Gm19668J3QMD1 248 aa8.58□□□□□ -1.04
Ssbp4-201ENSMUST00000049908 Krtap22-2J3QNX6 67 aa8.5□□□□□ -1.05
Ssbp4-201ENSMUST00000049908 Sprr2kO70562 68 aa8.49□□□□□ -1.05
Ssbp4-201ENSMUST00000049908 Gm21887J3QQ04 176 aa8.38□□□□□ -1.07
Ssbp4-201ENSMUST00000049908 2300003K06RikA2A4M0 262 aa8.37□□□□□ -1.07
Ssbp4-201ENSMUST00000049908 Gm38119A0A0A6YX29 146 aa8.36□□□□□ -1.07
Ssbp4-201ENSMUST00000049908 Lce1lQ9D1G7 135 aa8.32□□□□□ -1.08
Ssbp4-201ENSMUST00000049908 Camk2n1Q6QWF9 78 aa8.3□□□□□ -1.08
Ssbp4-201ENSMUST00000049908 Krtap4-7Q9D732 168 aa8.25□□□□□ -1.09
Ssbp4-201ENSMUST00000049908 Krtap19-9bQ99NG9 58 aa8.18□□□□□ -1.1
Ssbp4-201ENSMUST00000049908 Gm40193A0A1B0GT39 78 aa8.11□□□□□ -1.11
Ssbp4-201ENSMUST00000049908 Krtap7-1Q9D3I6 87 aa8.01□□□□□ -1.13
Ssbp4-201ENSMUST00000049908 Sprr2gO70558 76 aa7.95□□□□□ -1.14
Ssbp4-201ENSMUST00000049908 Mp68P56379 58 aa7.92□□□□□ -1.14
Ssbp4-201ENSMUST00000049908 Krtap20-2E9Q0A8 60 aa7.9□□□□□ -1.14
Ssbp4-201ENSMUST00000049908 Gm20538F6Z9R1 75 aa7.9□□□□□ -1.14
Ssbp4-201ENSMUST00000049908 Lce1a1Q9CQH5 143 aa7.9□□□□□ -1.14
Ssbp4-201ENSMUST00000049908 Lce1hQ9D6R3 140 aa7.82□□□□□ -1.16
Ssbp4-201ENSMUST00000049908 Lce1eQ9D139 143 aa7.7□□□□□ -1.18
Ssbp4-201ENSMUST00000049908 A0A1Y7VJH8 109 aa7.68□□□□□ -1.18
Ssbp4-201ENSMUST00000049908 Lce1dQ9D731 133 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms