RNA–Protein interactions for RNA: ENSMUST00000049089.6

Twist1-201, Transcript of Twist-related protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Twist1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Twist1-201ENSMUST00000049089 2310079G19RikQ9D6L6 185 aa12.87□□□□□ -0.35
Twist1-201ENSMUST00000049089 Gm10337F7DEP7 55 aa12.83□□□□□ -0.36
Twist1-201ENSMUST00000049089 1700042G07RikB1AUF7 90 aa12.81□□□□□ -0.36
Twist1-201ENSMUST00000049089 Gm10061D3Z714 54 aa12.8□□□□□ -0.36
Twist1-201ENSMUST00000049089 Gm4491E0CX42 125 aa12.8□□□□□ -0.36
Twist1-201ENSMUST00000049089 4930507D05RikQ8C9C9 103 aa12.78□□□□□ -0.36
Twist1-201ENSMUST00000049089 H2al1bA0A087WP11 105 aa12.76□□□□□ -0.37
Twist1-201ENSMUST00000049089 H2al1kJ3QP08 105 aa12.76□□□□□ -0.37
Twist1-201ENSMUST00000049089 H2al1mQ9DAD9 105 aa12.76□□□□□ -0.37
Twist1-201ENSMUST00000049089 Fam229aB2KGE5 128 aa12.73□□□□□ -0.37
Twist1-201ENSMUST00000049089 Sox16Q62247 57 aa12.72□□□□□ -0.37
Twist1-201ENSMUST00000049089 Ndufb1P0DN34 57 aa12.71□□□□□ -0.37
Twist1-201ENSMUST00000049089 Krtap1-4Q3V2D6 188 aa12.7□□□□□ -0.38
Twist1-201ENSMUST00000049089 Uqcr11Q9CPX8 56 aa12.69□□□□□ -0.38
Twist1-201ENSMUST00000049089 Limd2Q8BGB5 128 aa12.67□□□□□ -0.38
Twist1-201ENSMUST00000049089 SptssbQ925E8 76 aa12.58□□□□□ -0.4
Twist1-201ENSMUST00000049089 SspoQ8CG65 4998 aa12.57□□□□□ -0.4
Twist1-201ENSMUST00000049089 4933415A04RikQ9D443 101 aa12.56□□□□□ -0.4
Twist1-201ENSMUST00000049089 9230102O04RikA2ASX7 82 aa12.54□□□□□ -0.4
Twist1-201ENSMUST00000049089 Gm11569B1AQB1 180 aa12.54□□□□□ -0.4
Twist1-201ENSMUST00000049089 Gm17416Q30KP4 66 aa12.52□□□□□ -0.4
Twist1-201ENSMUST00000049089 Defb1P56386 69 aa12.46□□□□□ -0.41
Twist1-201ENSMUST00000049089 Gm11562A0PK51 136 aa12.4□□□□□ -0.42
Twist1-201ENSMUST00000049089 Krtap13-1Q8K198 168 aa12.37□□□□□ -0.43
Twist1-201ENSMUST00000049089 Krtap17-1A2A5X6 109 aa12.33□□□□□ -0.44
Twist1-201ENSMUST00000049089 Krtap4-2B1AQ85 167 aa12.27□□□□□ -0.44
Twist1-201ENSMUST00000049089 Cox6b2Q80ZN9 88 aa12.27□□□□□ -0.44
Twist1-201ENSMUST00000049089 Krtap1-5A2A590 122 aa12.13□□□□□ -0.47
Twist1-201ENSMUST00000049089 2210017I01RikA0A0A6YVV1 95 aa12.1□□□□□ -0.47
Twist1-201ENSMUST00000049089 Lce1gQ9D195 139 aa12.09□□□□□ -0.47
Twist1-201ENSMUST00000049089 Sec61gP60060 68 aa12.04□□□□□ -0.48
Twist1-201ENSMUST00000049089 Gm3646F6S692 53 aa12.01□□□□□ -0.49
Twist1-201ENSMUST00000049089 Gm17606F6ZL36 78 aa11.89□□□□□ -0.51
Twist1-201ENSMUST00000049089 Krtap4-1Q3UUY3 169 aa11.88□□□□□ -0.51
Twist1-201ENSMUST00000049089 Syne2Q6ZWQ0 6874 aaKnown RBP11.82□□□□□ -0.52
Twist1-201ENSMUST00000049089 Krtap3-1A2A591 98 aa11.8□□□□□ -0.52
Twist1-201ENSMUST00000049089 B930094E09RikQ8C4T2 136 aa11.77□□□□□ -0.53
Twist1-201ENSMUST00000049089 Ndufs5Q99LY9 106 aa11.77□□□□□ -0.53
Twist1-201ENSMUST00000049089 Gm10382Q3V0T5 144 aa11.75□□□□□ -0.53
Twist1-201ENSMUST00000049089 Krtap9-5A2A5X3 358 aa11.73□□□□□ -0.53
Twist1-201ENSMUST00000049089 Gm11555B1AQ89 175 aa11.73□□□□□ -0.53
Twist1-201ENSMUST00000049089 Krtap19-2Q925I0 141 aa11.71□□□□□ -0.53
Twist1-201ENSMUST00000049089 Gm9955Q8CEJ8 102 aa11.7□□□□□ -0.54
Twist1-201ENSMUST00000049089 Lce1jD3YUU5 139 aa11.67□□□□□ -0.54
Twist1-201ENSMUST00000049089 Gm20537G3UYK7 97 aa11.66□□□□□ -0.54
Twist1-201ENSMUST00000049089 Gm11596B1AQB0 205 aa11.65□□□□□ -0.54
Twist1-201ENSMUST00000049089 Muc5bE9Q5I3 4800 aa11.63□□□□□ -0.55
Twist1-201ENSMUST00000049089 Gm19426M0QWC7 77 aa11.63□□□□□ -0.55
Twist1-201ENSMUST00000049089 Krtap12-1Q9Z287 130 aa11.57□□□□□ -0.56
Twist1-201ENSMUST00000049089 Pla2g10Q9QXX3 151 aa11.56□□□□□ -0.56
Twist1-201ENSMUST00000049089 Krtap4-6Q3V4B7 195 aa11.55□□□□□ -0.56
Twist1-201ENSMUST00000049089 Mdn1A2ANY6 5589 aaKnown RBP11.44□□□□□ -0.58
Twist1-201ENSMUST00000049089 BC029722A0A0N4SW31 51 aa11.35□□□□□ -0.59
Twist1-201ENSMUST00000049089 Gm3880A0A1B0GSB3 72 aa11.31□□□□□ -0.6
Twist1-201ENSMUST00000049089 Prm2P07978 107 aa11.31□□□□□ -0.6
Twist1-201ENSMUST00000049089 Krtap19-9aF8WH65 55 aa11.26□□□□□ -0.61
Twist1-201ENSMUST00000049089 Gm6358A0A087WPH4 74 aa11.2□□□□□ -0.62
Twist1-201ENSMUST00000049089 Gm11564A2A4L9 201 aa11.08□□□□□ -0.64
Twist1-201ENSMUST00000049089 Gm11563B1AQ90 168 aa11.08□□□□□ -0.64
Twist1-201ENSMUST00000049089 Gm11595B1AQA7 289 aa11.08□□□□□ -0.64
Twist1-201ENSMUST00000049089 Krtap4-8B1AQA8 209 aa11.08□□□□□ -0.64
Twist1-201ENSMUST00000049089 Gm17402F6Z0L5 76 aa11.06□□□□□ -0.64
Twist1-201ENSMUST00000049089 Spink7Q6IE32 76 aa11.05□□□□□ -0.64
Twist1-201ENSMUST00000049089 CriptO70333 101 aa11.02□□□□□ -0.64
Twist1-201ENSMUST00000049089 Krtap4-7Q9D732 168 aa11.02□□□□□ -0.64
Twist1-201ENSMUST00000049089 Gm12216A0A1W2P827 62 aa10.93□□□□□ -0.66
Twist1-201ENSMUST00000049089 Lce1iQ9D6P5 149 aa10.93□□□□□ -0.66
Twist1-201ENSMUST00000049089 Romo1P60603 79 aa10.89□□□□□ -0.67
Twist1-201ENSMUST00000049089 Lce1a2Q9D1K4 149 aa10.75□□□□□ -0.69
Twist1-201ENSMUST00000049089 Krtap4-9B1AQA9 244 aa10.74□□□□□ -0.69
Twist1-201ENSMUST00000049089 Sprr2a3Q4KL71 83 aa10.74□□□□□ -0.69
Twist1-201ENSMUST00000049089 Sprr2a1Q9CQK8 83 aa10.74□□□□□ -0.69
Twist1-201ENSMUST00000049089 Mt2P02798 61 aa10.64□□□□□ -0.71
Twist1-201ENSMUST00000049089 Mt4P47945 62 aa10.59□□□□□ -0.71
Twist1-201ENSMUST00000049089 Gm21887J3QQ04 176 aa10.55□□□□□ -0.72
Twist1-201ENSMUST00000049089 Fsip2A2ARZ3 6995 aa10.53□□□□□ -0.72
Twist1-201ENSMUST00000049089 A0A1Y7VJH8 109 aa10.5□□□□□ -0.73
Twist1-201ENSMUST00000049089 Krtap8-1O08633 61 aa10.43□□□□□ -0.74
Twist1-201ENSMUST00000049089 Krtap9-3Q3V2C1 136 aa10.4□□□□□ -0.74
Twist1-201ENSMUST00000049089 Krtap4-13Q9D7P3 165 aa10.36□□□□□ -0.75
Twist1-201ENSMUST00000049089 Krtap6-3A0A087WQL6 57 aa10.18□□□□□ -0.78
Twist1-201ENSMUST00000049089 Lce1bQ9D149 137 aa10.16□□□□□ -0.78
Twist1-201ENSMUST00000049089 Krtap22-2J3QNX6 67 aa10.11□□□□□ -0.79
Twist1-201ENSMUST00000049089 Gm19668J3QMD1 248 aa10.1□□□□□ -0.79
Twist1-201ENSMUST00000049089 Krtap28-10A0A1Y7VP58 119 aa10.09□□□□□ -0.79
Twist1-201ENSMUST00000049089 Sprr2kO70562 68 aa10.09□□□□□ -0.79
Twist1-201ENSMUST00000049089 Camk2n1Q6QWF9 78 aa10.07□□□□□ -0.8
Twist1-201ENSMUST00000049089 A0A1Y7VLE6 161 aa10.06□□□□□ -0.8
Twist1-201ENSMUST00000049089 Gm38119A0A0A6YX29 146 aa10.04□□□□□ -0.8
Twist1-201ENSMUST00000049089 2300003K06RikA2A4M0 262 aa9.98□□□□□ -0.81
Twist1-201ENSMUST00000049089 Krtap28-13A0A087WQP5 138 aa9.96□□□□□ -0.81
Twist1-201ENSMUST00000049089 Krtap7-1Q9D3I6 87 aa9.96□□□□□ -0.81
Twist1-201ENSMUST00000049089 Gm40193A0A1B0GT39 78 aa9.96□□□□□ -0.82
Twist1-201ENSMUST00000049089 Lce1lQ9D1G7 135 aa9.9□□□□□ -0.82
Twist1-201ENSMUST00000049089 A030005K14RikA0A1Y7VNY1 122 aa9.78□□□□□ -0.84
Twist1-201ENSMUST00000049089 Mp68P56379 58 aa9.74□□□□□ -0.85
Twist1-201ENSMUST00000049089 Krtap19-9bQ99NG9 58 aa9.65□□□□□ -0.86
Twist1-201ENSMUST00000049089 Sprr2gO70558 76 aa9.39□□□□□ -0.91
Twist1-201ENSMUST00000049089 Lce1a1Q9CQH5 143 aa9.38□□□□□ -0.91
Twist1-201ENSMUST00000049089 Tnp1P10856 55 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms