RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 2310057N15RikQ9D6T8 200 aa11,85□□□□□ -0,51
Upf3a-201ENSMUST00000043767 Cox6b2Q80ZN9 88 aa11,82□□□□□ -0,52
Upf3a-201ENSMUST00000043767 Ush2AQ2QI47 5193 aa11,8□□□□□ -0,52
Upf3a-201ENSMUST00000043767 Gm20537G3UYK7 97 aa11,72□□□□□ -0,53
Upf3a-201ENSMUST00000043767 Sec61bQ9CQS8 96 aaKnown RBP11,72□□□□□ -0,53
Upf3a-201ENSMUST00000043767 Hmcn2A2AJ76 5100 aa11,67□□□□□ -0,54
Upf3a-201ENSMUST00000043767 Gm17416Q30KP4 66 aa11,64□□□□□ -0,55
Upf3a-201ENSMUST00000043767 Ubr4A2AN08 5180 aa11,57□□□□□ -0,56
Upf3a-201ENSMUST00000043767 Gm3880A0A1B0GSB3 72 aa11,55□□□□□ -0,56
Upf3a-201ENSMUST00000043767 Gm9789Q8BIG3 52 aa11,55□□□□□ -0,56
Upf3a-201ENSMUST00000043767 Crct1Q6PAI5 102 aa11,52□□□□□ -0,57
Upf3a-201ENSMUST00000043767 Gm12216A0A1W2P827 62 aa11,51□□□□□ -0,57
Upf3a-201ENSMUST00000043767 Prm1P02319 51 aa11,51□□□□□ -0,57
Upf3a-201ENSMUST00000043767 Gm9955Q8CEJ8 102 aa11,5□□□□□ -0,57
Upf3a-201ENSMUST00000043767 Gm7735D3YX18 52 aa11,47□□□□□ -0,57
Upf3a-201ENSMUST00000043767 Krtap16-3Q8C1I6 86 aa11,4□□□□□ -0,58
Upf3a-201ENSMUST00000043767 Gm10318A0A1W2P728 225 aa11,36□□□□□ -0,59
Upf3a-201ENSMUST00000043767 4932415D10RikA0A1W2P6U8 4986 aa11,34□□□□□ -0,59
Upf3a-201ENSMUST00000043767 Gm17606F6ZL36 78 aa11,33□□□□□ -0,6
Upf3a-201ENSMUST00000043767 2210017I01RikA0A0A6YVV1 95 aa11,32□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Krtap1-3A2A588 173 aa11,31□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Krtap19-1Q925H2 87 aa11,31□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Gm10382Q3V0T5 144 aa11,31□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Krtap13-1Q8K198 168 aa11,3□□□□□ -0,6
Upf3a-201ENSMUST00000043767 ZanO88799 5376 aa11,3□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Krtap19-3Q925H6 87 aa11,28□□□□□ -0,6
Upf3a-201ENSMUST00000043767 Krtap3-1A2A591 98 aa11,2□□□□□ -0,62
Upf3a-201ENSMUST00000043767 Fam229aB2KGE5 128 aa11,2□□□□□ -0,62
Upf3a-201ENSMUST00000043767 Romo1P60603 79 aa11,14□□□□□ -0,63
Upf3a-201ENSMUST00000043767 Krtap1-5A2A590 122 aa11,07□□□□□ -0,64
Upf3a-201ENSMUST00000043767 LorP18165 486 aa11,04□□□□□ -0,64
Upf3a-201ENSMUST00000043767 Gm19402J3QJV4 266 aa11,02□□□□□ -0,64
Upf3a-201ENSMUST00000043767 CriptO70333 101 aa10,99□□□□□ -0,65
Upf3a-201ENSMUST00000043767 Fat4Q2PZL6 4981 aa10,96□□□□□ -0,66
Upf3a-201ENSMUST00000043767 Rnf213E9Q555 5152 aaKnown RBP10,88□□□□□ -0,67
Upf3a-201ENSMUST00000043767 Gm20538F6Z9R1 75 aa10,86□□□□□ -0,67
Upf3a-201ENSMUST00000043767 Mp68P56379 58 aa10,86□□□□□ -0,67
Upf3a-201ENSMUST00000043767 Krtap1-4Q3V2D6 188 aa10,78□□□□□ -0,68
Upf3a-201ENSMUST00000043767 BC029722A0A0N4SW31 51 aa10,72□□□□□ -0,69
Upf3a-201ENSMUST00000043767 B930094E09RikQ8C4T2 136 aa10,68□□□□□ -0,7
Upf3a-201ENSMUST00000043767 Gm19426M0QWC7 77 aa10,65□□□□□ -0,7
Upf3a-201ENSMUST00000043767 Gm21887J3QQ04 176 aa10,64□□□□□ -0,71
Upf3a-201ENSMUST00000043767 Gm17402F6Z0L5 76 aa10,54□□□□□ -0,72
Upf3a-201ENSMUST00000043767 SspoQ8CG65 4998 aa10,46□□□□□ -0,73
Upf3a-201ENSMUST00000043767 Lce1jD3YUU5 139 aa10,35□□□□□ -0,75
Upf3a-201ENSMUST00000043767 Gm10061D3Z714 54 aa10,32□□□□□ -0,76
Upf3a-201ENSMUST00000043767 Spink7Q6IE32 76 aa10,32□□□□□ -0,76
Upf3a-201ENSMUST00000043767 Krtap7-1Q9D3I6 87 aa10,29□□□□□ -0,76
Upf3a-201ENSMUST00000043767 Krtap12-1Q9Z287 130 aa10,24□□□□□ -0,77
Upf3a-201ENSMUST00000043767 Gm40193A0A1B0GT39 78 aa10,22□□□□□ -0,77
Upf3a-201ENSMUST00000043767 Krtap17-1A2A5X6 109 aa10,16□□□□□ -0,78
Upf3a-201ENSMUST00000043767 Sprr2a3Q4KL71 83 aa10,13□□□□□ -0,79
Upf3a-201ENSMUST00000043767 Sprr2a1Q9CQK8 83 aa10,13□□□□□ -0,79
Upf3a-201ENSMUST00000043767 Krtap19-9aF8WH65 55 aa10,07□□□□□ -0,8
Upf3a-201ENSMUST00000043767 Krtap19-2Q925I0 141 aa10,05□□□□□ -0,8
Upf3a-201ENSMUST00000043767 Ndufaf8A2AMZ4 74 aa10,02□□□□□ -0,81
Upf3a-201ENSMUST00000043767 Krtap9-5A2A5X3 358 aa10,02□□□□□ -0,81
Upf3a-201ENSMUST00000043767 Prm2P07978 107 aa9,97□□□□□ -0,81
Upf3a-201ENSMUST00000043767 Gm11569B1AQB1 180 aa9,89□□□□□ -0,83
Upf3a-201ENSMUST00000043767 Gm19668J3QMD1 248 aa9,71□□□□□ -0,85
Upf3a-201ENSMUST00000043767 Muc5bE9Q5I3 4800 aa9,71□□□□□ -0,85
Upf3a-201ENSMUST00000043767 Lce1iQ9D6P5 149 aa9,7□□□□□ -0,86
Upf3a-201ENSMUST00000043767 Camk2n1Q6QWF9 78 aa9,63□□□□□ -0,87
Upf3a-201ENSMUST00000043767 Lce1a2Q9D1K4 149 aa9,58□□□□□ -0,88
Upf3a-201ENSMUST00000043767 Gm6358A0A087WPH4 74 aa9,53□□□□□ -0,88
Upf3a-201ENSMUST00000043767 Mdn1A2ANY6 5589 aaKnown RBP9,31□□□□□ -0,92
Upf3a-201ENSMUST00000043767 Mt2P02798 61 aa9,25□□□□□ -0,93
Upf3a-201ENSMUST00000043767 Tnp1P10856 55 aa9,2□□□□□ -0,94
Upf3a-201ENSMUST00000043767 Krtap4-2B1AQ85 167 aa9,19□□□□□ -0,94
Upf3a-201ENSMUST00000043767 Lce1gQ9D195 139 aa9,16□□□□□ -0,94
Upf3a-201ENSMUST00000043767 Gm11555B1AQ89 175 aa9,1□□□□□ -0,95
Upf3a-201ENSMUST00000043767 Gm9112A2AI92 75 aa9,09□□□□□ -0,95
Upf3a-201ENSMUST00000043767 Krtap8-1O08633 61 aa9,08□□□□□ -0,96
Upf3a-201ENSMUST00000043767 Krtap4-6Q3V4B7 195 aa9,06□□□□□ -0,96
Upf3a-201ENSMUST00000043767 Krtap19-9bQ99NG9 58 aa9,02□□□□□ -0,97
Upf3a-201ENSMUST00000043767 Syne2Q6ZWQ0 6874 aaKnown RBP8,93□□□□□ -0,98
Upf3a-201ENSMUST00000043767 Gm11596B1AQB0 205 aa8,89□□□□□ -0,99
Upf3a-201ENSMUST00000043767 Krtap4-1Q3UUY3 169 aa8,87□□□□□ -0,99
Upf3a-201ENSMUST00000043767 Gm11562A0PK51 136 aa8,85□□□□□ -0,99
Upf3a-201ENSMUST00000043767 2310046K23RikA0A0A6YVW6 87 aa8,8□□□□□ -1
Upf3a-201ENSMUST00000043767 Krtap22-2J3QNX6 67 aa8,74□□□□□ -1,01
Upf3a-201ENSMUST00000043767 Krtap9-3Q3V2C1 136 aa8,65□□□□□ -1,02
Upf3a-201ENSMUST00000043767 Gm11564A2A4L9 201 aa8,61□□□□□ -1,03
Upf3a-201ENSMUST00000043767 Gm11563B1AQ90 168 aa8,61□□□□□ -1,03
Upf3a-201ENSMUST00000043767 Gm11595B1AQA7 289 aa8,61□□□□□ -1,03
Upf3a-201ENSMUST00000043767 Krtap4-8B1AQA8 209 aa8,61□□□□□ -1,03
Upf3a-201ENSMUST00000043767 Lce1hQ9D6R3 140 aa8,53□□□□□ -1,04
Upf3a-201ENSMUST00000043767 Krtap4-9B1AQA9 244 aa8,4□□□□□ -1,06
Upf3a-201ENSMUST00000043767 Mt4P47945 62 aa8,39□□□□□ -1,07
Upf3a-201ENSMUST00000043767 Fsip2A2ARZ3 6995 aa8,35□□□□□ -1,07
Upf3a-201ENSMUST00000043767 Lce1bQ9D149 137 aa8,18□□□□□ -1,1
Upf3a-201ENSMUST00000043767 Gm38119A0A0A6YX29 146 aa8,12□□□□□ -1,11
Upf3a-201ENSMUST00000043767 Krtap4-13Q9D7P3 165 aa8,1□□□□□ -1,11
Upf3a-201ENSMUST00000043767 Gm10272F7CZ33 110 aa7,99□□□□□ -1,13
Upf3a-201ENSMUST00000043767 2300003K06RikA2A4M0 262 aa7,94□□□□□ -1,14
Upf3a-201ENSMUST00000043767 Sprr2kO70562 68 aa7,91□□□□□ -1,14
Upf3a-201ENSMUST00000043767 Lce1dQ9D731 133 aa7,84□□□□□ -1,15
Upf3a-201ENSMUST00000043767 Sprr2gO70558 76 aa7,83□□□□□ -1,16
Upf3a-201ENSMUST00000043767 4933428G20RikQ9D3X4 101 aa7,76□□□□□ -1,17
Upf3a-201ENSMUST00000043767 Syne1Q6ZWR6 8799 aa7,75□□□□□ -1,17
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms