RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm10382Q3V0T5 144 aa11,48□□□□□ -0,57
Cln6-201ENSMUST00000034776 Sec61bQ9CQS8 96 aaKnown RBP11,47□□□□□ -0,57
Cln6-201ENSMUST00000034776 2310057N15RikQ9D6T8 200 aa11,42□□□□□ -0,58
Cln6-201ENSMUST00000034776 Gm20537G3UYK7 97 aa11,39□□□□□ -0,59
Cln6-201ENSMUST00000034776 Gm9955Q8CEJ8 102 aa11,32□□□□□ -0,6
Cln6-201ENSMUST00000034776 Krtap13-1Q8K198 168 aa11,32□□□□□ -0,6
Cln6-201ENSMUST00000034776 Lce1mQ9CR91 182 aa11,26□□□□□ -0,61
Cln6-201ENSMUST00000034776 Herc1E9PZP8 4859 aa11,25□□□□□ -0,61
Cln6-201ENSMUST00000034776 1700042G07RikB1AUF7 90 aa11,2□□□□□ -0,62
Cln6-201ENSMUST00000034776 Pla2g10Q9QXX3 151 aa11,19□□□□□ -0,62
Cln6-201ENSMUST00000034776 Krtap1-5A2A590 122 aa11,13□□□□□ -0,63
Cln6-201ENSMUST00000034776 Krtap16-3Q8C1I6 86 aa11,11□□□□□ -0,63
Cln6-201ENSMUST00000034776 Gm3880A0A1B0GSB3 72 aa11,07□□□□□ -0,64
Cln6-201ENSMUST00000034776 Fam229aB2KGE5 128 aa11,03□□□□□ -0,64
Cln6-201ENSMUST00000034776 BC029722A0A0N4SW31 51 aa11,02□□□□□ -0,64
Cln6-201ENSMUST00000034776 Krtap19-1Q925H2 87 aa11,01□□□□□ -0,65
Cln6-201ENSMUST00000034776 Crct1Q6PAI5 102 aa10,97□□□□□ -0,65
Cln6-201ENSMUST00000034776 Krtap19-3Q925H6 87 aa10,93□□□□□ -0,66
Cln6-201ENSMUST00000034776 Gm10318A0A1W2P728 225 aa10,87□□□□□ -0,67
Cln6-201ENSMUST00000034776 Ush2AQ2QI47 5193 aa10,85□□□□□ -0,67
Cln6-201ENSMUST00000034776 Hmcn2A2AJ76 5100 aa10,78□□□□□ -0,68
Cln6-201ENSMUST00000034776 Gm18596A0A1W2P860 280 aa10,71□□□□□ -0,69
Cln6-201ENSMUST00000034776 Krtap1-3A2A588 173 aa10,7□□□□□ -0,7
Cln6-201ENSMUST00000034776 B930094E09RikQ8C4T2 136 aa10,7□□□□□ -0,7
Cln6-201ENSMUST00000034776 Gm19402J3QJV4 266 aa10,69□□□□□ -0,7
Cln6-201ENSMUST00000034776 Gm17402F6Z0L5 76 aa10,67□□□□□ -0,7
Cln6-201ENSMUST00000034776 Gm9789Q8BIG3 52 aa10,67□□□□□ -0,7
Cln6-201ENSMUST00000034776 Ubr4A2AN08 5180 aa10,64□□□□□ -0,71
Cln6-201ENSMUST00000034776 Gm19426M0QWC7 77 aa10,63□□□□□ -0,71
Cln6-201ENSMUST00000034776 ZanO88799 5376 aa10,62□□□□□ -0,71
Cln6-201ENSMUST00000034776 Gm12216A0A1W2P827 62 aa10,61□□□□□ -0,71
Cln6-201ENSMUST00000034776 Romo1P60603 79 aa10,58□□□□□ -0,72
Cln6-201ENSMUST00000034776 Prm1P02319 51 aa10,57□□□□□ -0,72
Cln6-201ENSMUST00000034776 4932415D10RikA0A1W2P6U8 4986 aa10,57□□□□□ -0,72
Cln6-201ENSMUST00000034776 Gm7735D3YX18 52 aa10,49□□□□□ -0,73
Cln6-201ENSMUST00000034776 Krtap1-4Q3V2D6 188 aa10,46□□□□□ -0,74
Cln6-201ENSMUST00000034776 Sprr2a3Q4KL71 83 aa10,45□□□□□ -0,74
Cln6-201ENSMUST00000034776 Sprr2a1Q9CQK8 83 aa10,45□□□□□ -0,74
Cln6-201ENSMUST00000034776 Spink7Q6IE32 76 aa10,43□□□□□ -0,74
Cln6-201ENSMUST00000034776 LorP18165 486 aa10,38□□□□□ -0,75
Cln6-201ENSMUST00000034776 CriptO70333 101 aa10,37□□□□□ -0,75
Cln6-201ENSMUST00000034776 Gm21887J3QQ04 176 aa10,36□□□□□ -0,75
Cln6-201ENSMUST00000034776 Fat4Q2PZL6 4981 aa10,26□□□□□ -0,77
Cln6-201ENSMUST00000034776 Rnf213E9Q555 5152 aaKnown RBP10,25□□□□□ -0,77
Cln6-201ENSMUST00000034776 Lce1jD3YUU5 139 aa10,14□□□□□ -0,79
Cln6-201ENSMUST00000034776 Krtap12-1Q9Z287 130 aa10,08□□□□□ -0,8
Cln6-201ENSMUST00000034776 Krtap19-9aF8WH65 55 aa9,99□□□□□ -0,81
Cln6-201ENSMUST00000034776 SspoQ8CG65 4998 aa9,87□□□□□ -0,83
Cln6-201ENSMUST00000034776 Gm19668J3QMD1 248 aa9,85□□□□□ -0,83
Cln6-201ENSMUST00000034776 Camk2n1Q6QWF9 78 aa9,78□□□□□ -0,84
Cln6-201ENSMUST00000034776 Prm2P07978 107 aa9,77□□□□□ -0,85
Cln6-201ENSMUST00000034776 Krtap17-1A2A5X6 109 aa9,74□□□□□ -0,85
Cln6-201ENSMUST00000034776 Krtap7-1Q9D3I6 87 aa9,73□□□□□ -0,85
Cln6-201ENSMUST00000034776 Krtap19-2Q925I0 141 aa9,7□□□□□ -0,86
Cln6-201ENSMUST00000034776 Krtap9-5A2A5X3 358 aa9,62□□□□□ -0,87
Cln6-201ENSMUST00000034776 Gm40193A0A1B0GT39 78 aa9,57□□□□□ -0,88
Cln6-201ENSMUST00000034776 Gm10061D3Z714 54 aa9,56□□□□□ -0,88
Cln6-201ENSMUST00000034776 Lce1iQ9D6P5 149 aa9,52□□□□□ -0,89
Cln6-201ENSMUST00000034776 Mp68P56379 58 aa9,44□□□□□ -0,9
Cln6-201ENSMUST00000034776 Lce1a2Q9D1K4 149 aa9,42□□□□□ -0,9
Cln6-201ENSMUST00000034776 Krtap8-1O08633 61 aa9,31□□□□□ -0,92
Cln6-201ENSMUST00000034776 Muc5bE9Q5I3 4800 aa9,22□□□□□ -0,93
Cln6-201ENSMUST00000034776 Gm20538F6Z9R1 75 aa9,2□□□□□ -0,94
Cln6-201ENSMUST00000034776 Krtap19-9bQ99NG9 58 aa9,19□□□□□ -0,94
Cln6-201ENSMUST00000034776 Gm6358A0A087WPH4 74 aa9,14□□□□□ -0,95
Cln6-201ENSMUST00000034776 Tnp1P10856 55 aa9,04□□□□□ -0,96
Cln6-201ENSMUST00000034776 Gm11569B1AQB1 180 aa8,99□□□□□ -0,97
Cln6-201ENSMUST00000034776 Mt2P02798 61 aa8,99□□□□□ -0,97
Cln6-201ENSMUST00000034776 Krtap9-3Q3V2C1 136 aa8,78□□□□□ -1
Cln6-201ENSMUST00000034776 Lce1hQ9D6R3 140 aa8,69□□□□□ -1,02
Cln6-201ENSMUST00000034776 Ndufaf8A2AMZ4 74 aa8,66□□□□□ -1,02
Cln6-201ENSMUST00000034776 2310046K23RikA0A0A6YVW6 87 aa8,63□□□□□ -1,03
Cln6-201ENSMUST00000034776 Krtap22-2J3QNX6 67 aa8,48□□□□□ -1,05
Cln6-201ENSMUST00000034776 Mdn1A2ANY6 5589 aaKnown RBP8,43□□□□□ -1,06
Cln6-201ENSMUST00000034776 Gm11555B1AQ89 175 aa8,23□□□□□ -1,09
Cln6-201ENSMUST00000034776 Krtap4-6Q3V4B7 195 aa8,17□□□□□ -1,1
Cln6-201ENSMUST00000034776 Lce1gQ9D195 139 aa8,11□□□□□ -1,11
Cln6-201ENSMUST00000034776 Krtap4-2B1AQ85 167 aa8,03□□□□□ -1,12
Cln6-201ENSMUST00000034776 Krtap4-1Q3UUY3 169 aa8,02□□□□□ -1,13
Cln6-201ENSMUST00000034776 Gm10272F7CZ33 110 aa7,98□□□□□ -1,13
Cln6-201ENSMUST00000034776 Gm11596B1AQB0 205 aa7,9□□□□□ -1,14
Cln6-201ENSMUST00000034776 Lce1dQ9D731 133 aa7,79□□□□□ -1,16
Cln6-201ENSMUST00000034776 Syne2Q6ZWQ0 6874 aaKnown RBP7,77□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm11564A2A4L9 201 aa7,76□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm11563B1AQ90 168 aa7,76□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm11595B1AQA7 289 aa7,76□□□□□ -1,17
Cln6-201ENSMUST00000034776 Krtap4-8B1AQA8 209 aa7,76□□□□□ -1,17
Cln6-201ENSMUST00000034776 Sprr2gO70558 76 aa7,75□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm11562A0PK51 136 aa7,72□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm11938Q9D3H4 131 aa7,72□□□□□ -1,17
Cln6-201ENSMUST00000034776 Gm9112A2AI92 75 aa7,69□□□□□ -1,18
Cln6-201ENSMUST00000034776 Sprr2dO70555 85 aa7,69□□□□□ -1,18
Cln6-201ENSMUST00000034776 Mt4P47945 62 aa7,63□□□□□ -1,19
Cln6-201ENSMUST00000034776 Lce1bQ9D149 137 aa7,61□□□□□ -1,19
Cln6-201ENSMUST00000034776 Lce1eQ9D139 143 aa7,6□□□□□ -1,19
Cln6-201ENSMUST00000034776 Krtap4-9B1AQA9 244 aa7,58□□□□□ -1,2
Cln6-201ENSMUST00000034776 Syne1Q6ZWR6 8799 aa7,54□□□□□ -1,2
Cln6-201ENSMUST00000034776 Gm38119A0A0A6YX29 146 aa7,46□□□□□ -1,21
Cln6-201ENSMUST00000034776 Fsip2A2ARZ3 6995 aa7,44□□□□□ -1,22
Cln6-201ENSMUST00000034776 4933428G20RikQ9D3X4 101 aa7,4□□□□□ -1,23
Retrieved 100 of 22,080 RNA–protein pairs in 71,8 ms