RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm10382Q3V0T5 144 aa11.48□□□□□ -0.57
Cln6-201ENSMUST00000034776 Sec61bQ9CQS8 96 aaKnown RBP11.47□□□□□ -0.57
Cln6-201ENSMUST00000034776 2310057N15RikQ9D6T8 200 aa11.42□□□□□ -0.58
Cln6-201ENSMUST00000034776 Gm20537G3UYK7 97 aa11.39□□□□□ -0.59
Cln6-201ENSMUST00000034776 Gm9955Q8CEJ8 102 aa11.32□□□□□ -0.6
Cln6-201ENSMUST00000034776 Krtap13-1Q8K198 168 aa11.32□□□□□ -0.6
Cln6-201ENSMUST00000034776 Lce1mQ9CR91 182 aa11.26□□□□□ -0.61
Cln6-201ENSMUST00000034776 Herc1E9PZP8 4859 aa11.25□□□□□ -0.61
Cln6-201ENSMUST00000034776 1700042G07RikB1AUF7 90 aa11.2□□□□□ -0.62
Cln6-201ENSMUST00000034776 Pla2g10Q9QXX3 151 aa11.19□□□□□ -0.62
Cln6-201ENSMUST00000034776 Krtap1-5A2A590 122 aa11.13□□□□□ -0.63
Cln6-201ENSMUST00000034776 Krtap16-3Q8C1I6 86 aa11.11□□□□□ -0.63
Cln6-201ENSMUST00000034776 Gm3880A0A1B0GSB3 72 aa11.07□□□□□ -0.64
Cln6-201ENSMUST00000034776 Fam229aB2KGE5 128 aa11.03□□□□□ -0.64
Cln6-201ENSMUST00000034776 BC029722A0A0N4SW31 51 aa11.02□□□□□ -0.64
Cln6-201ENSMUST00000034776 Krtap19-1Q925H2 87 aa11.01□□□□□ -0.65
Cln6-201ENSMUST00000034776 Crct1Q6PAI5 102 aa10.97□□□□□ -0.65
Cln6-201ENSMUST00000034776 Krtap19-3Q925H6 87 aa10.93□□□□□ -0.66
Cln6-201ENSMUST00000034776 Gm10318A0A1W2P728 225 aa10.87□□□□□ -0.67
Cln6-201ENSMUST00000034776 Ush2AQ2QI47 5193 aa10.85□□□□□ -0.67
Cln6-201ENSMUST00000034776 Hmcn2A2AJ76 5100 aa10.78□□□□□ -0.68
Cln6-201ENSMUST00000034776 Gm18596A0A1W2P860 280 aa10.71□□□□□ -0.69
Cln6-201ENSMUST00000034776 Krtap1-3A2A588 173 aa10.7□□□□□ -0.7
Cln6-201ENSMUST00000034776 B930094E09RikQ8C4T2 136 aa10.7□□□□□ -0.7
Cln6-201ENSMUST00000034776 Gm19402J3QJV4 266 aa10.69□□□□□ -0.7
Cln6-201ENSMUST00000034776 Gm17402F6Z0L5 76 aa10.67□□□□□ -0.7
Cln6-201ENSMUST00000034776 Gm9789Q8BIG3 52 aa10.67□□□□□ -0.7
Cln6-201ENSMUST00000034776 Ubr4A2AN08 5180 aa10.64□□□□□ -0.71
Cln6-201ENSMUST00000034776 Gm19426M0QWC7 77 aa10.63□□□□□ -0.71
Cln6-201ENSMUST00000034776 ZanO88799 5376 aa10.62□□□□□ -0.71
Cln6-201ENSMUST00000034776 Gm12216A0A1W2P827 62 aa10.61□□□□□ -0.71
Cln6-201ENSMUST00000034776 Romo1P60603 79 aa10.58□□□□□ -0.72
Cln6-201ENSMUST00000034776 Prm1P02319 51 aa10.57□□□□□ -0.72
Cln6-201ENSMUST00000034776 4932415D10RikA0A1W2P6U8 4986 aa10.57□□□□□ -0.72
Cln6-201ENSMUST00000034776 Gm7735D3YX18 52 aa10.49□□□□□ -0.73
Cln6-201ENSMUST00000034776 Krtap1-4Q3V2D6 188 aa10.46□□□□□ -0.74
Cln6-201ENSMUST00000034776 Sprr2a3Q4KL71 83 aa10.45□□□□□ -0.74
Cln6-201ENSMUST00000034776 Sprr2a1Q9CQK8 83 aa10.45□□□□□ -0.74
Cln6-201ENSMUST00000034776 Spink7Q6IE32 76 aa10.43□□□□□ -0.74
Cln6-201ENSMUST00000034776 LorP18165 486 aa10.38□□□□□ -0.75
Cln6-201ENSMUST00000034776 CriptO70333 101 aa10.37□□□□□ -0.75
Cln6-201ENSMUST00000034776 Gm21887J3QQ04 176 aa10.36□□□□□ -0.75
Cln6-201ENSMUST00000034776 Fat4Q2PZL6 4981 aa10.26□□□□□ -0.77
Cln6-201ENSMUST00000034776 Rnf213E9Q555 5152 aaKnown RBP10.25□□□□□ -0.77
Cln6-201ENSMUST00000034776 Lce1jD3YUU5 139 aa10.14□□□□□ -0.79
Cln6-201ENSMUST00000034776 Krtap12-1Q9Z287 130 aa10.08□□□□□ -0.8
Cln6-201ENSMUST00000034776 Krtap19-9aF8WH65 55 aa9.99□□□□□ -0.81
Cln6-201ENSMUST00000034776 SspoQ8CG65 4998 aa9.87□□□□□ -0.83
Cln6-201ENSMUST00000034776 Gm19668J3QMD1 248 aa9.85□□□□□ -0.83
Cln6-201ENSMUST00000034776 Camk2n1Q6QWF9 78 aa9.78□□□□□ -0.84
Cln6-201ENSMUST00000034776 Prm2P07978 107 aa9.77□□□□□ -0.85
Cln6-201ENSMUST00000034776 Krtap17-1A2A5X6 109 aa9.74□□□□□ -0.85
Cln6-201ENSMUST00000034776 Krtap7-1Q9D3I6 87 aa9.73□□□□□ -0.85
Cln6-201ENSMUST00000034776 Krtap19-2Q925I0 141 aa9.7□□□□□ -0.86
Cln6-201ENSMUST00000034776 Krtap9-5A2A5X3 358 aa9.62□□□□□ -0.87
Cln6-201ENSMUST00000034776 Gm40193A0A1B0GT39 78 aa9.57□□□□□ -0.88
Cln6-201ENSMUST00000034776 Gm10061D3Z714 54 aa9.56□□□□□ -0.88
Cln6-201ENSMUST00000034776 Lce1iQ9D6P5 149 aa9.52□□□□□ -0.89
Cln6-201ENSMUST00000034776 Mp68P56379 58 aa9.44□□□□□ -0.9
Cln6-201ENSMUST00000034776 Lce1a2Q9D1K4 149 aa9.42□□□□□ -0.9
Cln6-201ENSMUST00000034776 Krtap8-1O08633 61 aa9.31□□□□□ -0.92
Cln6-201ENSMUST00000034776 Muc5bE9Q5I3 4800 aa9.22□□□□□ -0.93
Cln6-201ENSMUST00000034776 Gm20538F6Z9R1 75 aa9.2□□□□□ -0.94
Cln6-201ENSMUST00000034776 Krtap19-9bQ99NG9 58 aa9.19□□□□□ -0.94
Cln6-201ENSMUST00000034776 Gm6358A0A087WPH4 74 aa9.14□□□□□ -0.95
Cln6-201ENSMUST00000034776 Tnp1P10856 55 aa9.04□□□□□ -0.96
Cln6-201ENSMUST00000034776 Gm11569B1AQB1 180 aa8.99□□□□□ -0.97
Cln6-201ENSMUST00000034776 Mt2P02798 61 aa8.99□□□□□ -0.97
Cln6-201ENSMUST00000034776 Krtap9-3Q3V2C1 136 aa8.78□□□□□ -1
Cln6-201ENSMUST00000034776 Lce1hQ9D6R3 140 aa8.69□□□□□ -1.02
Cln6-201ENSMUST00000034776 Ndufaf8A2AMZ4 74 aa8.66□□□□□ -1.02
Cln6-201ENSMUST00000034776 2310046K23RikA0A0A6YVW6 87 aa8.63□□□□□ -1.03
Cln6-201ENSMUST00000034776 Krtap22-2J3QNX6 67 aa8.48□□□□□ -1.05
Cln6-201ENSMUST00000034776 Mdn1A2ANY6 5589 aaKnown RBP8.43□□□□□ -1.06
Cln6-201ENSMUST00000034776 Gm11555B1AQ89 175 aa8.23□□□□□ -1.09
Cln6-201ENSMUST00000034776 Krtap4-6Q3V4B7 195 aa8.17□□□□□ -1.1
Cln6-201ENSMUST00000034776 Lce1gQ9D195 139 aa8.11□□□□□ -1.11
Cln6-201ENSMUST00000034776 Krtap4-2B1AQ85 167 aa8.03□□□□□ -1.12
Cln6-201ENSMUST00000034776 Krtap4-1Q3UUY3 169 aa8.02□□□□□ -1.13
Cln6-201ENSMUST00000034776 Gm10272F7CZ33 110 aa7.98□□□□□ -1.13
Cln6-201ENSMUST00000034776 Gm11596B1AQB0 205 aa7.9□□□□□ -1.14
Cln6-201ENSMUST00000034776 Lce1dQ9D731 133 aa7.79□□□□□ -1.16
Cln6-201ENSMUST00000034776 Syne2Q6ZWQ0 6874 aaKnown RBP7.77□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm11564A2A4L9 201 aa7.76□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm11563B1AQ90 168 aa7.76□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm11595B1AQA7 289 aa7.76□□□□□ -1.17
Cln6-201ENSMUST00000034776 Krtap4-8B1AQA8 209 aa7.76□□□□□ -1.17
Cln6-201ENSMUST00000034776 Sprr2gO70558 76 aa7.75□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm11562A0PK51 136 aa7.72□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm11938Q9D3H4 131 aa7.72□□□□□ -1.17
Cln6-201ENSMUST00000034776 Gm9112A2AI92 75 aa7.69□□□□□ -1.18
Cln6-201ENSMUST00000034776 Sprr2dO70555 85 aa7.69□□□□□ -1.18
Cln6-201ENSMUST00000034776 Mt4P47945 62 aa7.63□□□□□ -1.19
Cln6-201ENSMUST00000034776 Lce1bQ9D149 137 aa7.61□□□□□ -1.19
Cln6-201ENSMUST00000034776 Lce1eQ9D139 143 aa7.6□□□□□ -1.19
Cln6-201ENSMUST00000034776 Krtap4-9B1AQA9 244 aa7.58□□□□□ -1.2
Cln6-201ENSMUST00000034776 Syne1Q6ZWR6 8799 aa7.54□□□□□ -1.2
Cln6-201ENSMUST00000034776 Gm38119A0A0A6YX29 146 aa7.46□□□□□ -1.21
Cln6-201ENSMUST00000034776 Fsip2A2ARZ3 6995 aa7.44□□□□□ -1.22
Cln6-201ENSMUST00000034776 4933428G20RikQ9D3X4 101 aa7.4□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms