RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Birc6O88738 4882 aa3.95□□□□□ -1.78
Csde1-201ENSMUST00000029446 Gm9955Q8CEJ8 102 aa3.94□□□□□ -1.78
Csde1-201ENSMUST00000029446 Dnah2P0C6F1 4456 aa3.93□□□□□ -1.78
Csde1-201ENSMUST00000029446 Ryr3A2AGL3 4863 aa3.92□□□□□ -1.78
Csde1-201ENSMUST00000029446 Rpl37Q9D823 97 aa3.91□□□□□ -1.78
Csde1-201ENSMUST00000029446 Fam229aB2KGE5 128 aa3.91□□□□□ -1.78
Csde1-201ENSMUST00000029446 Fat2Q5F226 4351 aa3.89□□□□□ -1.79
Csde1-201ENSMUST00000029446 SacsQ9JLC8 4582 aa3.88□□□□□ -1.79
Csde1-201ENSMUST00000029446 ApobE9Q414 4505 aa3.87□□□□□ -1.79
Csde1-201ENSMUST00000029446 Lce1a1Q9CQH5 143 aa3.86□□□□□ -1.79
Csde1-201ENSMUST00000029446 Lce1gQ9D195 139 aa3.86□□□□□ -1.79
Csde1-201ENSMUST00000029446 Gm5767A0A0J9YTU8 78 aa3.86□□□□□ -1.79
Csde1-201ENSMUST00000029446 D6Ertd527eA0A0N4SWI3 464 aa3.81□□□□□ -1.8
Csde1-201ENSMUST00000029446 Abca13Q5SSE9 5034 aa3.79□□□□□ -1.8
Csde1-201ENSMUST00000029446 Fat1A0A1L1SQU7 4645 aa3.79□□□□□ -1.8
Csde1-201ENSMUST00000029446 Gm20537G3UYK7 97 aa3.79□□□□□ -1.8
Csde1-201ENSMUST00000029446 Cox6b2Q80ZN9 88 aa3.78□□□□□ -1.8
Csde1-201ENSMUST00000029446 Spink7Q6IE32 76 aa3.77□□□□□ -1.81
Csde1-201ENSMUST00000029446 Krtap31-2Q8CAY5 177 aa3.76□□□□□ -1.81
Csde1-201ENSMUST00000029446 Dync1h1Q9JHU4 4644 aaKnown RBP3.75□□□□□ -1.81
Csde1-201ENSMUST00000029446 A930033H14RikG5E8X6 103 aa3.75□□□□□ -1.81
Csde1-201ENSMUST00000029446 Hectd4E9Q2E4 4418 aa3.75□□□□□ -1.81
Csde1-201ENSMUST00000029446 Krtap19-5O08632 62 aa3.74□□□□□ -1.81
Csde1-201ENSMUST00000029446 2310079G19RikQ9D6L6 185 aa3.71□□□□□ -1.82
Csde1-201ENSMUST00000029446 Lrp1bQ9JI18 4599 aa3.7□□□□□ -1.82
Csde1-201ENSMUST00000029446 Gm19426M0QWC7 77 aa3.69□□□□□ -1.82
Csde1-201ENSMUST00000029446 Herc2Q4U2R1 4836 aa3.69□□□□□ -1.82
Csde1-201ENSMUST00000029446 A030014E15RikA0A1Y7VJV2 120 aa3.68□□□□□ -1.82
Csde1-201ENSMUST00000029446 BC029722A0A0N4SW31 51 aa3.67□□□□□ -1.82
Csde1-201ENSMUST00000029446 Gm9736A0A1W2P7N1 277 aa3.67□□□□□ -1.82
Csde1-201ENSMUST00000029446 A0A1Y7VJ07 166 aa3.67□□□□□ -1.82
Csde1-201ENSMUST00000029446 Gm18596A0A1W2P860 280 aa3.66□□□□□ -1.82
Csde1-201ENSMUST00000029446 Lce1dQ9D731 133 aa3.66□□□□□ -1.82
Csde1-201ENSMUST00000029446 HydinQ80W93 5154 aa3.65□□□□□ -1.83
Csde1-201ENSMUST00000029446 Lce1lQ9D1G7 135 aa3.61□□□□□ -1.83
Csde1-201ENSMUST00000029446 Lce1hQ9D6R3 140 aa3.61□□□□□ -1.83
Csde1-201ENSMUST00000029446 Mycbp2Q7TPH6 4711 aa3.6□□□□□ -1.83
Csde1-201ENSMUST00000029446 Gm40193A0A1B0GT39 78 aa3.6□□□□□ -1.83
Csde1-201ENSMUST00000029446 Lce1jD3YUU5 139 aa3.59□□□□□ -1.83
Csde1-201ENSMUST00000029446 Gm17416Q30KP4 66 aa3.58□□□□□ -1.84
Csde1-201ENSMUST00000029446 Gm7544A0A1Y7VJ58 118 aa3.58□□□□□ -1.84
Csde1-201ENSMUST00000029446 Herc1E9PZP8 4859 aa3.56□□□□□ -1.84
Csde1-201ENSMUST00000029446 Dnhd1D3Z2X2 4750 aa3.56□□□□□ -1.84
Csde1-201ENSMUST00000029446 A030005L19RikA0A1Y7VIU2 113 aa3.56□□□□□ -1.84
Csde1-201ENSMUST00000029446 Dnah8Q91XQ0 4731 aa3.51□□□□□ -1.85
Csde1-201ENSMUST00000029446 Fat3Q8BNA6 4555 aa3.5□□□□□ -1.85
Csde1-201ENSMUST00000029446 Hmcn2A2AJ76 5100 aa3.5□□□□□ -1.85
Csde1-201ENSMUST00000029446 Lrp1Q91ZX7 4545 aaKnown RBP3.47□□□□□ -1.85
Csde1-201ENSMUST00000029446 B930094E09RikQ8C4T2 136 aa3.47□□□□□ -1.85
Csde1-201ENSMUST00000029446 Kiaa1109A2AAE1 5005 aa3.45□□□□□ -1.86
Csde1-201ENSMUST00000029446 Gm10318A0A1W2P728 225 aa3.42□□□□□ -1.86
Csde1-201ENSMUST00000029446 Lce1bQ9D149 137 aa3.41□□□□□ -1.86
Csde1-201ENSMUST00000029446 Krtap31-1Q9D644 177 aa3.4□□□□□ -1.86
Csde1-201ENSMUST00000029446 Krtap3-1A2A591 98 aa3.39□□□□□ -1.87
Csde1-201ENSMUST00000029446 Krtap13-1Q8K198 168 aa3.37□□□□□ -1.87
Csde1-201ENSMUST00000029446 Crct1Q6PAI5 102 aa3.35□□□□□ -1.87
Csde1-201ENSMUST00000029446 Ush2AQ2QI47 5193 aa3.34□□□□□ -1.87
Csde1-201ENSMUST00000029446 A030003K21RikA0A1Y7VIM3 128 aa3.32□□□□□ -1.88
Csde1-201ENSMUST00000029446 Ubr4A2AN08 5180 aa3.32□□□□□ -1.88
Csde1-201ENSMUST00000029446 Tnp1P10856 55 aa3.32□□□□□ -1.88
Csde1-201ENSMUST00000029446 Lce1eQ9D139 143 aa3.29□□□□□ -1.88
Csde1-201ENSMUST00000029446 Krtap7-1Q9D3I6 87 aa3.29□□□□□ -1.88
Csde1-201ENSMUST00000029446 Gm17402F6Z0L5 76 aa3.28□□□□□ -1.88
Csde1-201ENSMUST00000029446 Krtap1-5A2A590 122 aa3.28□□□□□ -1.89
Csde1-201ENSMUST00000029446 LorP18165 486 aa3.26□□□□□ -1.89
Csde1-201ENSMUST00000029446 Lrp2A2ARV4 4660 aa3.25□□□□□ -1.89
Csde1-201ENSMUST00000029446 4933428G20RikQ9D3X4 101 aa3.23□□□□□ -1.89
Csde1-201ENSMUST00000029446 Gm11559Q9D3H7 191 aa3.21□□□□□ -1.9
Csde1-201ENSMUST00000029446 Muc5bE9Q5I3 4800 aa3.2□□□□□ -1.9
Csde1-201ENSMUST00000029446 Krtap16-3Q8C1I6 86 aa3.17□□□□□ -1.9
Csde1-201ENSMUST00000029446 Fat4Q2PZL6 4981 aa3.16□□□□□ -1.9
Csde1-201ENSMUST00000029446 4932415D10RikA0A1W2P6U8 4986 aa3.15□□□□□ -1.91
Csde1-201ENSMUST00000029446 Krtap19-1Q925H2 87 aa3.14□□□□□ -1.91
Csde1-201ENSMUST00000029446 Krtap19-3Q925H6 87 aa3.13□□□□□ -1.91
Csde1-201ENSMUST00000029446 ZanO88799 5376 aa3.11□□□□□ -1.91
Csde1-201ENSMUST00000029446 Sprr2a3Q4KL71 83 aa3.11□□□□□ -1.91
Csde1-201ENSMUST00000029446 Sprr2a1Q9CQK8 83 aa3.11□□□□□ -1.91
Csde1-201ENSMUST00000029446 Krtap1-4Q3V2D6 188 aa3.1□□□□□ -1.91
Csde1-201ENSMUST00000029446 Gm6217A0A1Y7VJK9 128 aa3.09□□□□□ -1.92
Csde1-201ENSMUST00000029446 Gm10100J3QK64 120 aa3.08□□□□□ -1.92
Csde1-201ENSMUST00000029446 Prm1P02319 51 aa3.07□□□□□ -1.92
Csde1-201ENSMUST00000029446 Rnf213E9Q555 5152 aaKnown RBP3.05□□□□□ -1.92
Csde1-201ENSMUST00000029446 Gm9789Q8BIG3 52 aa3.04□□□□□ -1.92
Csde1-201ENSMUST00000029446 Krtap1-3A2A588 173 aa3.02□□□□□ -1.93
Csde1-201ENSMUST00000029446 Krtap17-1A2A5X6 109 aa3.02□□□□□ -1.93
Csde1-201ENSMUST00000029446 Gm7735D3YX18 52 aa3.02□□□□□ -1.93
Csde1-201ENSMUST00000029446 Krtap19-9aF8WH65 55 aa3□□□□□ -1.93
Csde1-201ENSMUST00000029446 Krtap12-1Q9Z287 130 aa2.99□□□□□ -1.93
Csde1-201ENSMUST00000029446 Krtap9-5A2A5X3 358 aa2.95□□□□□ -1.94
Csde1-201ENSMUST00000029446 A0A286YCP9 139 aa2.94□□□□□ -1.94
Csde1-201ENSMUST00000029446 Lce1kJ3QP15 125 aa2.93□□□□□ -1.94
Csde1-201ENSMUST00000029446 SspoQ8CG65 4998 aa2.92□□□□□ -1.94
Csde1-201ENSMUST00000029446 Krtap19-2Q925I0 141 aa2.81□□□□□ -1.96
Csde1-201ENSMUST00000029446 Lce1cQ9D1C5 147 aa2.8□□□□□ -1.96
Csde1-201ENSMUST00000029446 Krtap19-9bQ99NG9 58 aa2.79□□□□□ -1.96
Csde1-201ENSMUST00000029446 Lce1fB9EJP6 147 aa2.78□□□□□ -1.96
Csde1-201ENSMUST00000029446 Krtap8-1O08633 61 aa2.77□□□□□ -1.97
Csde1-201ENSMUST00000029446 Gm10061D3Z714 54 aa2.76□□□□□ -1.97
Csde1-201ENSMUST00000029446 Gm6358A0A087WPH4 74 aa2.74□□□□□ -1.97
Csde1-201ENSMUST00000029446 Syne1Q6ZWR6 8799 aa2.73□□□□□ -1.97
Retrieved 100 of 22,080 RNA–protein pairs in 74 ms