RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 2210017I01RikA0A0A6YVV1 95 aa10,42□□□□□ -0,74
Cdx1-201ENSMUST00000025521 Krtap3-1A2A591 98 aa10,4□□□□□ -0,74
Cdx1-201ENSMUST00000025521 HydinQ80W93 5154 aa10,34□□□□□ -0,75
Cdx1-201ENSMUST00000025521 Lrp2A2ARV4 4660 aa10,24□□□□□ -0,77
Cdx1-201ENSMUST00000025521 Sec61bQ9CQS8 96 aaKnown RBP10,22□□□□□ -0,77
Cdx1-201ENSMUST00000025521 Gm3880A0A1B0GSB3 72 aa10,19□□□□□ -0,78
Cdx1-201ENSMUST00000025521 Krtap13-1Q8K198 168 aa10,11□□□□□ -0,79
Cdx1-201ENSMUST00000025521 2310057N15RikQ9D6T8 200 aa10,01□□□□□ -0,81
Cdx1-201ENSMUST00000025521 Krtap1-5A2A590 122 aa9,98□□□□□ -0,81
Cdx1-201ENSMUST00000025521 BC029722A0A0N4SW31 51 aa9,98□□□□□ -0,81
Cdx1-201ENSMUST00000025521 PcloQ9QYX7 5068 aa9,9□□□□□ -0,82
Cdx1-201ENSMUST00000025521 Gm12216A0A1W2P827 62 aa9,82□□□□□ -0,84
Cdx1-201ENSMUST00000025521 Fam229aB2KGE5 128 aa9,82□□□□□ -0,84
Cdx1-201ENSMUST00000025521 Romo1P60603 79 aa9,81□□□□□ -0,84
Cdx1-201ENSMUST00000025521 Krtap16-3Q8C1I6 86 aa9,8□□□□□ -0,84
Cdx1-201ENSMUST00000025521 Gm17402F6Z0L5 76 aa9,78□□□□□ -0,84
Cdx1-201ENSMUST00000025521 B930094E09RikQ8C4T2 136 aa9,77□□□□□ -0,85
Cdx1-201ENSMUST00000025521 Krtap19-1Q925H2 87 aa9,71□□□□□ -0,85
Cdx1-201ENSMUST00000025521 Lce1mQ9CR91 182 aa9,68□□□□□ -0,86
Cdx1-201ENSMUST00000025521 Gm19426M0QWC7 77 aa9,64□□□□□ -0,87
Cdx1-201ENSMUST00000025521 Krtap19-3Q925H6 87 aa9,63□□□□□ -0,87
Cdx1-201ENSMUST00000025521 Herc1E9PZP8 4859 aa9,62□□□□□ -0,87
Cdx1-201ENSMUST00000025521 Crct1Q6PAI5 102 aa9,55□□□□□ -0,88
Cdx1-201ENSMUST00000025521 CriptO70333 101 aa9,51□□□□□ -0,89
Cdx1-201ENSMUST00000025521 Gm21887J3QQ04 176 aa9,48□□□□□ -0,89
Cdx1-201ENSMUST00000025521 Sprr2a3Q4KL71 83 aa9,48□□□□□ -0,89
Cdx1-201ENSMUST00000025521 Sprr2a1Q9CQK8 83 aa9,48□□□□□ -0,89
Cdx1-201ENSMUST00000025521 Gm10318A0A1W2P728 225 aa9,46□□□□□ -0,9
Cdx1-201ENSMUST00000025521 Gm19402J3QJV4 266 aa9,42□□□□□ -0,9
Cdx1-201ENSMUST00000025521 Spink7Q6IE32 76 aa9,37□□□□□ -0,91
Cdx1-201ENSMUST00000025521 Krtap1-4Q3V2D6 188 aa9,35□□□□□ -0,91
Cdx1-201ENSMUST00000025521 Ush2AQ2QI47 5193 aa9,34□□□□□ -0,91
Cdx1-201ENSMUST00000025521 Hmcn2A2AJ76 5100 aa9,33□□□□□ -0,92
Cdx1-201ENSMUST00000025521 Krtap4-1Q3UUY3 169 aa9,32□□□□□ -0,92
Cdx1-201ENSMUST00000025521 A0A1Y7VJH8 109 aa9,32□□□□□ -0,92
Cdx1-201ENSMUST00000025521 Krtap1-3A2A588 173 aa9,29□□□□□ -0,92
Cdx1-201ENSMUST00000025521 Gm9789Q8BIG3 52 aa9,23□□□□□ -0,93
Cdx1-201ENSMUST00000025521 4932415D10RikA0A1W2P6U8 4986 aa9,22□□□□□ -0,93
Cdx1-201ENSMUST00000025521 ZanO88799 5376 aa9,21□□□□□ -0,94
Cdx1-201ENSMUST00000025521 Gm18596A0A1W2P860 280 aa9,14□□□□□ -0,95
Cdx1-201ENSMUST00000025521 Prm1P02319 51 aa9,14□□□□□ -0,95
Cdx1-201ENSMUST00000025521 Ubr4A2AN08 5180 aa9,09□□□□□ -0,95
Cdx1-201ENSMUST00000025521 Gm7735D3YX18 52 aa9,04□□□□□ -0,96
Cdx1-201ENSMUST00000025521 Krtap7-1Q9D3I6 87 aa9,01□□□□□ -0,97
Cdx1-201ENSMUST00000025521 LorP18165 486 aa9□□□□□ -0,97
Cdx1-201ENSMUST00000025521 Rnf213E9Q555 5152 aaKnown RBP8,99□□□□□ -0,97
Cdx1-201ENSMUST00000025521 Gm40193A0A1B0GT39 78 aa8,98□□□□□ -0,97
Cdx1-201ENSMUST00000025521 Krtap12-1Q9Z287 130 aa8,94□□□□□ -0,98
Cdx1-201ENSMUST00000025521 Krtap28-10A0A1Y7VP58 119 aa8,94□□□□□ -0,98
Cdx1-201ENSMUST00000025521 Lce1jD3YUU5 139 aa8,94□□□□□ -0,98
Cdx1-201ENSMUST00000025521 Krtap19-9aF8WH65 55 aa8,91□□□□□ -0,98
Cdx1-201ENSMUST00000025521 Camk2n1Q6QWF9 78 aa8,91□□□□□ -0,98
Cdx1-201ENSMUST00000025521 Gm19668J3QMD1 248 aa8,89□□□□□ -0,99
Cdx1-201ENSMUST00000025521 Fat4Q2PZL6 4981 aa8,86□□□□□ -0,99
Cdx1-201ENSMUST00000025521 Mp68P56379 58 aa8,86□□□□□ -0,99
Cdx1-201ENSMUST00000025521 Gm11555B1AQ89 175 aa8,83□□□□□ -1
Cdx1-201ENSMUST00000025521 A0A1Y7VLE6 161 aa8,8□□□□□ -1
Cdx1-201ENSMUST00000025521 Krtap28-13A0A087WQP5 138 aa8,7□□□□□ -1,02
Cdx1-201ENSMUST00000025521 Gm20538F6Z9R1 75 aa8,69□□□□□ -1,02
Cdx1-201ENSMUST00000025521 SspoQ8CG65 4998 aa8,65□□□□□ -1,02
Cdx1-201ENSMUST00000025521 Prm2P07978 107 aa8,65□□□□□ -1,02
Cdx1-201ENSMUST00000025521 Gm11563B1AQ90 168 aa8,62□□□□□ -1,03
Cdx1-201ENSMUST00000025521 Krtap4-7Q9D732 168 aa8,62□□□□□ -1,03
Cdx1-201ENSMUST00000025521 Krtap19-2Q925I0 141 aa8,53□□□□□ -1,04
Cdx1-201ENSMUST00000025521 A030005K14RikA0A1Y7VNY1 122 aa8,48□□□□□ -1,05
Cdx1-201ENSMUST00000025521 Krtap17-1A2A5X6 109 aa8,45□□□□□ -1,06
Cdx1-201ENSMUST00000025521 Krtap9-5A2A5X3 358 aa8,43□□□□□ -1,06
Cdx1-201ENSMUST00000025521 Krtap8-1O08633 61 aa8,42□□□□□ -1,06
Cdx1-201ENSMUST00000025521 Lce1iQ9D6P5 149 aa8,4□□□□□ -1,06
Cdx1-201ENSMUST00000025521 Tnp1P10856 55 aa8,32□□□□□ -1,08
Cdx1-201ENSMUST00000025521 Lce1a2Q9D1K4 149 aa8,32□□□□□ -1,08
Cdx1-201ENSMUST00000025521 Krtap19-9bQ99NG9 58 aa8,29□□□□□ -1,08
Cdx1-201ENSMUST00000025521 Gm10061D3Z714 54 aa8,27□□□□□ -1,09
Cdx1-201ENSMUST00000025521 Ndufaf8A2AMZ4 74 aa8,2□□□□□ -1,1
Cdx1-201ENSMUST00000025521 A030005L19RikA0A1Y7VIU2 113 aa8,17□□□□□ -1,1
Cdx1-201ENSMUST00000025521 Muc5bE9Q5I3 4800 aa8,08□□□□□ -1,12
Cdx1-201ENSMUST00000025521 Gm6358A0A087WPH4 74 aa8,01□□□□□ -1,13
Cdx1-201ENSMUST00000025521 2310046K23RikA0A0A6YVW6 87 aa7,97□□□□□ -1,13
Cdx1-201ENSMUST00000025521 Mt2P02798 61 aa7,93□□□□□ -1,14
Cdx1-201ENSMUST00000025521 Krtap9-3Q3V2C1 136 aa7,81□□□□□ -1,16
Cdx1-201ENSMUST00000025521 Gm7544A0A1Y7VJ58 118 aa7,79□□□□□ -1,16
Cdx1-201ENSMUST00000025521 Lce1hQ9D6R3 140 aa7,76□□□□□ -1,17
Cdx1-201ENSMUST00000025521 Gm11569B1AQB1 180 aa7,71□□□□□ -1,18
Cdx1-201ENSMUST00000025521 A0A1Y7VJ07 166 aa7,7□□□□□ -1,18
Cdx1-201ENSMUST00000025521 Krtap4-2B1AQ85 167 aa7,54□□□□□ -1,2
Cdx1-201ENSMUST00000025521 Krtap22-2J3QNX6 67 aa7,49□□□□□ -1,21
Cdx1-201ENSMUST00000025521 A030014E15RikA0A1Y7VJV2 120 aa7,46□□□□□ -1,22
Cdx1-201ENSMUST00000025521 Gm11562A0PK51 136 aa7,37□□□□□ -1,23
Cdx1-201ENSMUST00000025521 Gm9112A2AI92 75 aa7,23□□□□□ -1,25
Cdx1-201ENSMUST00000025521 Mdn1A2ANY6 5589 aaKnown RBP7,19□□□□□ -1,26
Cdx1-201ENSMUST00000025521 Lce1gQ9D195 139 aa7,17□□□□□ -1,26
Cdx1-201ENSMUST00000025521 Sprr2gO70558 76 aa7,13□□□□□ -1,27
Cdx1-201ENSMUST00000025521 Gm10272F7CZ33 110 aa7,11□□□□□ -1,27
Cdx1-201ENSMUST00000025521 Lce1dQ9D731 133 aa7,06□□□□□ -1,28
Cdx1-201ENSMUST00000025521 Sprr2dO70555 85 aa7,05□□□□□ -1,28
Cdx1-201ENSMUST00000025521 Syne2Q6ZWQ0 6874 aaKnown RBP7,01□□□□□ -1,29
Cdx1-201ENSMUST00000025521 Gm11938Q9D3H4 131 aa6,99□□□□□ -1,29
Cdx1-201ENSMUST00000025521 Krtap4-6Q3V4B7 195 aa6,97□□□□□ -1,29
Cdx1-201ENSMUST00000025521 Gm11596B1AQB0 205 aa6,9□□□□□ -1,3
Cdx1-201ENSMUST00000025521 4933428G20RikQ9D3X4 101 aa6,9□□□□□ -1,3
Retrieved 100 of 22,080 RNA–protein pairs in 38,2 ms