RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 2210017I01RikA0A0A6YVV1 95 aa10.42□□□□□ -0.74
Cdx1-201ENSMUST00000025521 Krtap3-1A2A591 98 aa10.4□□□□□ -0.74
Cdx1-201ENSMUST00000025521 HydinQ80W93 5154 aa10.34□□□□□ -0.75
Cdx1-201ENSMUST00000025521 Lrp2A2ARV4 4660 aa10.24□□□□□ -0.77
Cdx1-201ENSMUST00000025521 Sec61bQ9CQS8 96 aaKnown RBP10.22□□□□□ -0.77
Cdx1-201ENSMUST00000025521 Gm3880A0A1B0GSB3 72 aa10.19□□□□□ -0.78
Cdx1-201ENSMUST00000025521 Krtap13-1Q8K198 168 aa10.11□□□□□ -0.79
Cdx1-201ENSMUST00000025521 2310057N15RikQ9D6T8 200 aa10.01□□□□□ -0.81
Cdx1-201ENSMUST00000025521 Krtap1-5A2A590 122 aa9.98□□□□□ -0.81
Cdx1-201ENSMUST00000025521 BC029722A0A0N4SW31 51 aa9.98□□□□□ -0.81
Cdx1-201ENSMUST00000025521 PcloQ9QYX7 5068 aa9.9□□□□□ -0.82
Cdx1-201ENSMUST00000025521 Gm12216A0A1W2P827 62 aa9.82□□□□□ -0.84
Cdx1-201ENSMUST00000025521 Fam229aB2KGE5 128 aa9.82□□□□□ -0.84
Cdx1-201ENSMUST00000025521 Romo1P60603 79 aa9.81□□□□□ -0.84
Cdx1-201ENSMUST00000025521 Krtap16-3Q8C1I6 86 aa9.8□□□□□ -0.84
Cdx1-201ENSMUST00000025521 Gm17402F6Z0L5 76 aa9.78□□□□□ -0.84
Cdx1-201ENSMUST00000025521 B930094E09RikQ8C4T2 136 aa9.77□□□□□ -0.85
Cdx1-201ENSMUST00000025521 Krtap19-1Q925H2 87 aa9.71□□□□□ -0.85
Cdx1-201ENSMUST00000025521 Lce1mQ9CR91 182 aa9.68□□□□□ -0.86
Cdx1-201ENSMUST00000025521 Gm19426M0QWC7 77 aa9.64□□□□□ -0.87
Cdx1-201ENSMUST00000025521 Krtap19-3Q925H6 87 aa9.63□□□□□ -0.87
Cdx1-201ENSMUST00000025521 Herc1E9PZP8 4859 aa9.62□□□□□ -0.87
Cdx1-201ENSMUST00000025521 Crct1Q6PAI5 102 aa9.55□□□□□ -0.88
Cdx1-201ENSMUST00000025521 CriptO70333 101 aa9.51□□□□□ -0.89
Cdx1-201ENSMUST00000025521 Gm21887J3QQ04 176 aa9.48□□□□□ -0.89
Cdx1-201ENSMUST00000025521 Sprr2a3Q4KL71 83 aa9.48□□□□□ -0.89
Cdx1-201ENSMUST00000025521 Sprr2a1Q9CQK8 83 aa9.48□□□□□ -0.89
Cdx1-201ENSMUST00000025521 Gm10318A0A1W2P728 225 aa9.46□□□□□ -0.9
Cdx1-201ENSMUST00000025521 Gm19402J3QJV4 266 aa9.42□□□□□ -0.9
Cdx1-201ENSMUST00000025521 Spink7Q6IE32 76 aa9.37□□□□□ -0.91
Cdx1-201ENSMUST00000025521 Krtap1-4Q3V2D6 188 aa9.35□□□□□ -0.91
Cdx1-201ENSMUST00000025521 Ush2AQ2QI47 5193 aa9.34□□□□□ -0.91
Cdx1-201ENSMUST00000025521 Hmcn2A2AJ76 5100 aa9.33□□□□□ -0.92
Cdx1-201ENSMUST00000025521 Krtap4-1Q3UUY3 169 aa9.32□□□□□ -0.92
Cdx1-201ENSMUST00000025521 A0A1Y7VJH8 109 aa9.32□□□□□ -0.92
Cdx1-201ENSMUST00000025521 Krtap1-3A2A588 173 aa9.29□□□□□ -0.92
Cdx1-201ENSMUST00000025521 Gm9789Q8BIG3 52 aa9.23□□□□□ -0.93
Cdx1-201ENSMUST00000025521 4932415D10RikA0A1W2P6U8 4986 aa9.22□□□□□ -0.93
Cdx1-201ENSMUST00000025521 ZanO88799 5376 aa9.21□□□□□ -0.94
Cdx1-201ENSMUST00000025521 Gm18596A0A1W2P860 280 aa9.14□□□□□ -0.95
Cdx1-201ENSMUST00000025521 Prm1P02319 51 aa9.14□□□□□ -0.95
Cdx1-201ENSMUST00000025521 Ubr4A2AN08 5180 aa9.09□□□□□ -0.95
Cdx1-201ENSMUST00000025521 Gm7735D3YX18 52 aa9.04□□□□□ -0.96
Cdx1-201ENSMUST00000025521 Krtap7-1Q9D3I6 87 aa9.01□□□□□ -0.97
Cdx1-201ENSMUST00000025521 LorP18165 486 aa9□□□□□ -0.97
Cdx1-201ENSMUST00000025521 Rnf213E9Q555 5152 aaKnown RBP8.99□□□□□ -0.97
Cdx1-201ENSMUST00000025521 Gm40193A0A1B0GT39 78 aa8.98□□□□□ -0.97
Cdx1-201ENSMUST00000025521 Krtap12-1Q9Z287 130 aa8.94□□□□□ -0.98
Cdx1-201ENSMUST00000025521 Krtap28-10A0A1Y7VP58 119 aa8.94□□□□□ -0.98
Cdx1-201ENSMUST00000025521 Lce1jD3YUU5 139 aa8.94□□□□□ -0.98
Cdx1-201ENSMUST00000025521 Krtap19-9aF8WH65 55 aa8.91□□□□□ -0.98
Cdx1-201ENSMUST00000025521 Camk2n1Q6QWF9 78 aa8.91□□□□□ -0.98
Cdx1-201ENSMUST00000025521 Gm19668J3QMD1 248 aa8.89□□□□□ -0.99
Cdx1-201ENSMUST00000025521 Fat4Q2PZL6 4981 aa8.86□□□□□ -0.99
Cdx1-201ENSMUST00000025521 Mp68P56379 58 aa8.86□□□□□ -0.99
Cdx1-201ENSMUST00000025521 Gm11555B1AQ89 175 aa8.83□□□□□ -1
Cdx1-201ENSMUST00000025521 A0A1Y7VLE6 161 aa8.8□□□□□ -1
Cdx1-201ENSMUST00000025521 Krtap28-13A0A087WQP5 138 aa8.7□□□□□ -1.02
Cdx1-201ENSMUST00000025521 Gm20538F6Z9R1 75 aa8.69□□□□□ -1.02
Cdx1-201ENSMUST00000025521 SspoQ8CG65 4998 aa8.65□□□□□ -1.02
Cdx1-201ENSMUST00000025521 Prm2P07978 107 aa8.65□□□□□ -1.02
Cdx1-201ENSMUST00000025521 Gm11563B1AQ90 168 aa8.62□□□□□ -1.03
Cdx1-201ENSMUST00000025521 Krtap4-7Q9D732 168 aa8.62□□□□□ -1.03
Cdx1-201ENSMUST00000025521 Krtap19-2Q925I0 141 aa8.53□□□□□ -1.04
Cdx1-201ENSMUST00000025521 A030005K14RikA0A1Y7VNY1 122 aa8.48□□□□□ -1.05
Cdx1-201ENSMUST00000025521 Krtap17-1A2A5X6 109 aa8.45□□□□□ -1.06
Cdx1-201ENSMUST00000025521 Krtap9-5A2A5X3 358 aa8.43□□□□□ -1.06
Cdx1-201ENSMUST00000025521 Krtap8-1O08633 61 aa8.42□□□□□ -1.06
Cdx1-201ENSMUST00000025521 Lce1iQ9D6P5 149 aa8.4□□□□□ -1.06
Cdx1-201ENSMUST00000025521 Tnp1P10856 55 aa8.32□□□□□ -1.08
Cdx1-201ENSMUST00000025521 Lce1a2Q9D1K4 149 aa8.32□□□□□ -1.08
Cdx1-201ENSMUST00000025521 Krtap19-9bQ99NG9 58 aa8.29□□□□□ -1.08
Cdx1-201ENSMUST00000025521 Gm10061D3Z714 54 aa8.27□□□□□ -1.09
Cdx1-201ENSMUST00000025521 Ndufaf8A2AMZ4 74 aa8.2□□□□□ -1.1
Cdx1-201ENSMUST00000025521 A030005L19RikA0A1Y7VIU2 113 aa8.17□□□□□ -1.1
Cdx1-201ENSMUST00000025521 Muc5bE9Q5I3 4800 aa8.08□□□□□ -1.12
Cdx1-201ENSMUST00000025521 Gm6358A0A087WPH4 74 aa8.01□□□□□ -1.13
Cdx1-201ENSMUST00000025521 2310046K23RikA0A0A6YVW6 87 aa7.97□□□□□ -1.13
Cdx1-201ENSMUST00000025521 Mt2P02798 61 aa7.93□□□□□ -1.14
Cdx1-201ENSMUST00000025521 Krtap9-3Q3V2C1 136 aa7.81□□□□□ -1.16
Cdx1-201ENSMUST00000025521 Gm7544A0A1Y7VJ58 118 aa7.79□□□□□ -1.16
Cdx1-201ENSMUST00000025521 Lce1hQ9D6R3 140 aa7.76□□□□□ -1.17
Cdx1-201ENSMUST00000025521 Gm11569B1AQB1 180 aa7.71□□□□□ -1.18
Cdx1-201ENSMUST00000025521 A0A1Y7VJ07 166 aa7.7□□□□□ -1.18
Cdx1-201ENSMUST00000025521 Krtap4-2B1AQ85 167 aa7.54□□□□□ -1.2
Cdx1-201ENSMUST00000025521 Krtap22-2J3QNX6 67 aa7.49□□□□□ -1.21
Cdx1-201ENSMUST00000025521 A030014E15RikA0A1Y7VJV2 120 aa7.46□□□□□ -1.22
Cdx1-201ENSMUST00000025521 Gm11562A0PK51 136 aa7.37□□□□□ -1.23
Cdx1-201ENSMUST00000025521 Gm9112A2AI92 75 aa7.23□□□□□ -1.25
Cdx1-201ENSMUST00000025521 Mdn1A2ANY6 5589 aaKnown RBP7.19□□□□□ -1.26
Cdx1-201ENSMUST00000025521 Lce1gQ9D195 139 aa7.17□□□□□ -1.26
Cdx1-201ENSMUST00000025521 Sprr2gO70558 76 aa7.13□□□□□ -1.27
Cdx1-201ENSMUST00000025521 Gm10272F7CZ33 110 aa7.11□□□□□ -1.27
Cdx1-201ENSMUST00000025521 Lce1dQ9D731 133 aa7.06□□□□□ -1.28
Cdx1-201ENSMUST00000025521 Sprr2dO70555 85 aa7.05□□□□□ -1.28
Cdx1-201ENSMUST00000025521 Syne2Q6ZWQ0 6874 aaKnown RBP7.01□□□□□ -1.29
Cdx1-201ENSMUST00000025521 Gm11938Q9D3H4 131 aa6.99□□□□□ -1.29
Cdx1-201ENSMUST00000025521 Krtap4-6Q3V4B7 195 aa6.97□□□□□ -1.29
Cdx1-201ENSMUST00000025521 Gm11596B1AQB0 205 aa6.9□□□□□ -1.3
Cdx1-201ENSMUST00000025521 4933428G20RikQ9D3X4 101 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms