RNA–Protein interactions for RNA: ENSMUST00000023359.12

Nde1-201, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nde1, Length 2,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-201ENSMUST00000023359 Lrp2A2ARV4 4660 aa7.71□□□□□ -1.18
Nde1-201ENSMUST00000023359 Sec61gP60060 68 aa7.69□□□□□ -1.18
Nde1-201ENSMUST00000023359 Ndufs5Q99LY9 106 aa7.67□□□□□ -1.18
Nde1-201ENSMUST00000023359 PcloQ9QYX7 5068 aa7.66□□□□□ -1.18
Nde1-201ENSMUST00000023359 Gm17416Q30KP4 66 aa7.63□□□□□ -1.19
Nde1-201ENSMUST00000023359 Gm17606F6ZL36 78 aa7.59□□□□□ -1.19
Nde1-201ENSMUST00000023359 Gm10382Q3V0T5 144 aa7.56□□□□□ -1.2
Nde1-201ENSMUST00000023359 2310057N15RikQ9D6T8 200 aa7.53□□□□□ -1.2
Nde1-201ENSMUST00000023359 Gm20537G3UYK7 97 aa7.48□□□□□ -1.21
Nde1-201ENSMUST00000023359 Krtap3-1A2A591 98 aa7.48□□□□□ -1.21
Nde1-201ENSMUST00000023359 Sec61bQ9CQS8 96 aaKnown RBP7.43□□□□□ -1.22
Nde1-201ENSMUST00000023359 Gm9955Q8CEJ8 102 aa7.41□□□□□ -1.22
Nde1-201ENSMUST00000023359 1700042G07RikB1AUF7 90 aa7.39□□□□□ -1.23
Nde1-201ENSMUST00000023359 Krtap13-1Q8K198 168 aa7.36□□□□□ -1.23
Nde1-201ENSMUST00000023359 Gm3880A0A1B0GSB3 72 aa7.36□□□□□ -1.23
Nde1-201ENSMUST00000023359 Herc1E9PZP8 4859 aa7.35□□□□□ -1.23
Nde1-201ENSMUST00000023359 Pla2g10Q9QXX3 151 aa7.27□□□□□ -1.24
Nde1-201ENSMUST00000023359 Crct1Q6PAI5 102 aa7.25□□□□□ -1.25
Nde1-201ENSMUST00000023359 Gm10318A0A1W2P728 225 aa7.24□□□□□ -1.25
Nde1-201ENSMUST00000023359 Krtap16-3Q8C1I6 86 aa7.2□□□□□ -1.26
Nde1-201ENSMUST00000023359 BC029722A0A0N4SW31 51 aa7.18□□□□□ -1.26
Nde1-201ENSMUST00000023359 Krtap1-5A2A590 122 aa7.18□□□□□ -1.26
Nde1-201ENSMUST00000023359 Fam229aB2KGE5 128 aa7.17□□□□□ -1.26
Nde1-201ENSMUST00000023359 Krtap19-1Q925H2 87 aa7.1□□□□□ -1.27
Nde1-201ENSMUST00000023359 Krtap19-3Q925H6 87 aa7.07□□□□□ -1.28
Nde1-201ENSMUST00000023359 Ush2AQ2QI47 5193 aa7.06□□□□□ -1.28
Nde1-201ENSMUST00000023359 Gm12216A0A1W2P827 62 aa7.01□□□□□ -1.29
Nde1-201ENSMUST00000023359 Hmcn2A2AJ76 5100 aa7□□□□□ -1.29
Nde1-201ENSMUST00000023359 Ubr4A2AN08 5180 aa6.99□□□□□ -1.29
Nde1-201ENSMUST00000023359 Gm19668J3QMD1 248 aa6.98□□□□□ -1.29
Nde1-201ENSMUST00000023359 B930094E09RikQ8C4T2 136 aa6.98□□□□□ -1.29
Nde1-201ENSMUST00000023359 Gm38119A0A0A6YX29 146 aa6.98□□□□□ -1.29
Nde1-201ENSMUST00000023359 CriptO70333 101 aa6.97□□□□□ -1.29
Nde1-201ENSMUST00000023359 ZanO88799 5376 aa6.96□□□□□ -1.3
Nde1-201ENSMUST00000023359 Gm18596A0A1W2P860 280 aa6.95□□□□□ -1.3
Nde1-201ENSMUST00000023359 Gm19426M0QWC7 77 aa6.95□□□□□ -1.3
Nde1-201ENSMUST00000023359 Romo1P60603 79 aa6.95□□□□□ -1.3
Nde1-201ENSMUST00000023359 4932415D10RikA0A1W2P6U8 4986 aa6.9□□□□□ -1.3
Nde1-201ENSMUST00000023359 Krtap1-3A2A588 173 aa6.9□□□□□ -1.31
Nde1-201ENSMUST00000023359 Spink7Q6IE32 76 aa6.9□□□□□ -1.31
Nde1-201ENSMUST00000023359 Gm17402F6Z0L5 76 aa6.85□□□□□ -1.31
Nde1-201ENSMUST00000023359 Gm21887J3QQ04 176 aa6.85□□□□□ -1.31
Nde1-201ENSMUST00000023359 Gm9789Q8BIG3 52 aa6.83□□□□□ -1.32
Nde1-201ENSMUST00000023359 Krtap31-2Q8CAY5 177 aa6.79□□□□□ -1.32
Nde1-201ENSMUST00000023359 LorP18165 486 aa6.78□□□□□ -1.32
Nde1-201ENSMUST00000023359 Krtap1-4Q3V2D6 188 aa6.78□□□□□ -1.32
Nde1-201ENSMUST00000023359 Fat4Q2PZL6 4981 aa6.77□□□□□ -1.33
Nde1-201ENSMUST00000023359 Sprr2a3Q4KL71 83 aa6.76□□□□□ -1.33
Nde1-201ENSMUST00000023359 Sprr2a1Q9CQK8 83 aa6.76□□□□□ -1.33
Nde1-201ENSMUST00000023359 Prm1P02319 51 aa6.74□□□□□ -1.33
Nde1-201ENSMUST00000023359 Gm7735D3YX18 52 aa6.72□□□□□ -1.33
Nde1-201ENSMUST00000023359 Lce1jD3YUU5 139 aa6.6□□□□□ -1.35
Nde1-201ENSMUST00000023359 Rnf213E9Q555 5152 aaKnown RBP6.59□□□□□ -1.35
Nde1-201ENSMUST00000023359 Lce1a1Q9CQH5 143 aa6.56□□□□□ -1.36
Nde1-201ENSMUST00000023359 Lce1gQ9D195 139 aa6.56□□□□□ -1.36
Nde1-201ENSMUST00000023359 Lce1hQ9D6R3 140 aa6.53□□□□□ -1.36
Nde1-201ENSMUST00000023359 Krtap12-1Q9Z287 130 aa6.53□□□□□ -1.36
Nde1-201ENSMUST00000023359 Krtap19-9aF8WH65 55 aa6.47□□□□□ -1.37
Nde1-201ENSMUST00000023359 Krtap28-13A0A087WQP5 138 aa6.45□□□□□ -1.38
Nde1-201ENSMUST00000023359 A0A1Y7VJH8 109 aa6.45□□□□□ -1.38
Nde1-201ENSMUST00000023359 Camk2n1Q6QWF9 78 aa6.45□□□□□ -1.38
Nde1-201ENSMUST00000023359 A0A1Y7VLE6 161 aa6.45□□□□□ -1.38
Nde1-201ENSMUST00000023359 A030005K14RikA0A1Y7VNY1 122 aa6.41□□□□□ -1.38
Nde1-201ENSMUST00000023359 Krtap17-1A2A5X6 109 aa6.39□□□□□ -1.39
Nde1-201ENSMUST00000023359 Krtap7-1Q9D3I6 87 aa6.37□□□□□ -1.39
Nde1-201ENSMUST00000023359 Prm2P07978 107 aa6.36□□□□□ -1.39
Nde1-201ENSMUST00000023359 SspoQ8CG65 4998 aa6.34□□□□□ -1.39
Nde1-201ENSMUST00000023359 Mp68P56379 58 aa6.29□□□□□ -1.4
Nde1-201ENSMUST00000023359 Krtap19-2Q925I0 141 aa6.28□□□□□ -1.4
Nde1-201ENSMUST00000023359 Lce1bQ9D149 137 aa6.28□□□□□ -1.4
Nde1-201ENSMUST00000023359 Krtap28-10A0A1Y7VP58 119 aa6.26□□□□□ -1.41
Nde1-201ENSMUST00000023359 Krtap9-5A2A5X3 358 aa6.25□□□□□ -1.41
Nde1-201ENSMUST00000023359 Krtap31-1Q9D644 177 aa6.25□□□□□ -1.41
Nde1-201ENSMUST00000023359 Gm40193A0A1B0GT39 78 aa6.2□□□□□ -1.42
Nde1-201ENSMUST00000023359 Lce1iQ9D6P5 149 aa6.18□□□□□ -1.42
Nde1-201ENSMUST00000023359 Gm10061D3Z714 54 aa6.16□□□□□ -1.42
Nde1-201ENSMUST00000023359 Lce1lQ9D1G7 135 aa6.15□□□□□ -1.42
Nde1-201ENSMUST00000023359 Lce1a2Q9D1K4 149 aa6.13□□□□□ -1.43
Nde1-201ENSMUST00000023359 Krtap8-1O08633 61 aa6.01□□□□□ -1.45
Nde1-201ENSMUST00000023359 A030014E15RikA0A1Y7VJV2 120 aa6.01□□□□□ -1.45
Nde1-201ENSMUST00000023359 Lce1eQ9D139 143 aa5.99□□□□□ -1.45
Nde1-201ENSMUST00000023359 Gm20538F6Z9R1 75 aa5.97□□□□□ -1.45
Nde1-201ENSMUST00000023359 Krtap19-9bQ99NG9 58 aa5.95□□□□□ -1.46
Nde1-201ENSMUST00000023359 Lce1dQ9D731 133 aa5.95□□□□□ -1.46
Nde1-201ENSMUST00000023359 A0A1Y7VJ07 166 aa5.93□□□□□ -1.46
Nde1-201ENSMUST00000023359 Muc5bE9Q5I3 4800 aa5.92□□□□□ -1.46
Nde1-201ENSMUST00000023359 Tnp1P10856 55 aa5.92□□□□□ -1.46
Nde1-201ENSMUST00000023359 Gm6358A0A087WPH4 74 aa5.91□□□□□ -1.46
Nde1-201ENSMUST00000023359 Mt2P02798 61 aa5.83□□□□□ -1.48
Nde1-201ENSMUST00000023359 Gm11569B1AQB1 180 aa5.82□□□□□ -1.48
Nde1-201ENSMUST00000023359 Gm11559Q9D3H7 191 aa5.8□□□□□ -1.48
Nde1-201ENSMUST00000023359 Ndufaf8A2AMZ4 74 aa5.79□□□□□ -1.48
Nde1-201ENSMUST00000023359 Krtap9-3Q3V2C1 136 aa5.74□□□□□ -1.49
Nde1-201ENSMUST00000023359 Gm7544A0A1Y7VJ58 118 aa5.68□□□□□ -1.5
Nde1-201ENSMUST00000023359 Mdn1A2ANY6 5589 aaKnown RBP5.57□□□□□ -1.52
Nde1-201ENSMUST00000023359 2310046K23RikA0A0A6YVW6 87 aa5.57□□□□□ -1.52
Nde1-201ENSMUST00000023359 A030005L19RikA0A1Y7VIU2 113 aa5.5□□□□□ -1.53
Nde1-201ENSMUST00000023359 Krtap22-2J3QNX6 67 aa5.49□□□□□ -1.53
Nde1-201ENSMUST00000023359 Gm10100J3QK64 120 aa5.36□□□□□ -1.55
Nde1-201ENSMUST00000023359 Krtap4-6Q3V4B7 195 aa5.32□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms