RNA–Protein interactions for RNA: ENSMUST00000023359.12

Nde1-201, Transcript of Nuclear distribution protein nudE homolog 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nde1, Length 2,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1-201ENSMUST00000023359 NischQ80TM9 1593 aa30.14■■■□□ 2.42
Nde1-201ENSMUST00000023359 Gm35339A0A140LHH9 1649 aa29.79■■■□□ 2.36
Nde1-201ENSMUST00000023359 Abcc9P70170 1546 aa29.23■■■□□ 2.27
Nde1-201ENSMUST00000023359 Abcc8B2RUS7 1588 aa28.71■■■□□ 2.19
Nde1-201ENSMUST00000023359 Rhox8Q6VSS7 320 aa27.59■■■□□ 2.01
Nde1-201ENSMUST00000023359 ScribQ80U72 1612 aa26.99■■□□□ 1.91
Nde1-201ENSMUST00000023359 Rtl1Q7M732 1744 aa26.78■■□□□ 1.88
Nde1-201ENSMUST00000023359 Dcaf1Q80TR8 1506 aa26.65■■□□□ 1.86
Nde1-201ENSMUST00000023359 Kdm5dQ62240 1548 aa26.41■■□□□ 1.82
Nde1-201ENSMUST00000023359 Rb1cc1Q9ESK9 1588 aa26.4■■□□□ 1.82
Nde1-201ENSMUST00000023359 NacadQ5SWP3 1504 aa26.22■■□□□ 1.79
Nde1-201ENSMUST00000023359 Ccdc180J3QNE4 1664 aa26.2■■□□□ 1.78
Nde1-201ENSMUST00000023359 Baz1aO88379 1555 aa26.05■■□□□ 1.76
Nde1-201ENSMUST00000023359 Zcchc6Q5BLK4 1491 aaKnown RBP25.93■■□□□ 1.74
Nde1-201ENSMUST00000023359 Sycp2Q9CUU3 1500 aa25.66■■□□□ 1.7
Nde1-201ENSMUST00000023359 Ccdc136Q3TVA9 1136 aa25.64■■□□□ 1.7
Nde1-201ENSMUST00000023359 Crybg2B7ZCC2 1516 aa25.58■■□□□ 1.69
Nde1-201ENSMUST00000023359 Smarca2Q6DIC0 1577 aa25.42■■□□□ 1.66
Nde1-201ENSMUST00000023359 BicraF8VPZ9 1578 aa25.16■■□□□ 1.62
Nde1-201ENSMUST00000023359 Trim41Q5NCC3 630 aa25.06■■□□□ 1.6
Nde1-201ENSMUST00000023359 HrcG5E8J6 738 aa24.97■■□□□ 1.59
Nde1-201ENSMUST00000023359 Cecr2E9Q2Z1 1453 aa24.94■■□□□ 1.58
Nde1-201ENSMUST00000023359 Brd4Q9ESU6 1400 aaKnown RBP24.8■■□□□ 1.56
Nde1-201ENSMUST00000023359 Synj1Q8CHC4 1574 aa24.67■■□□□ 1.54
Nde1-201ENSMUST00000023359 Cngb1E1AZ71 1325 aa24.56■■□□□ 1.52
Nde1-201ENSMUST00000023359 CftrP26361 1476 aa24.52■■□□□ 1.52
Nde1-201ENSMUST00000023359 Smarca4Q3TKT4 1613 aaKnown RBP24.5■■□□□ 1.51
Nde1-201ENSMUST00000023359 Cttnbp2B9EJA2 1648 aa24.44■■□□□ 1.5
Nde1-201ENSMUST00000023359 Golga3P55937 1487 aa24.42■■□□□ 1.5
Nde1-201ENSMUST00000023359 Cep164Q5DU05 1446 aa24.42■■□□□ 1.5
Nde1-201ENSMUST00000023359 Esf1Q3V1V3 845 aaKnown RBP24.4■■□□□ 1.5
Nde1-201ENSMUST00000023359 Rsf1E9PWW9 1441 aaKnown RBP24.31■■□□□ 1.48
Nde1-201ENSMUST00000023359 Chic1Q8CBW7 227 aa24.29■■□□□ 1.48
Nde1-201ENSMUST00000023359 Ccdc88bQ4QRL3 1481 aa24.22■■□□□ 1.47
Nde1-201ENSMUST00000023359 Iqgap2Q3UQ44 1575 aa24.22■■□□□ 1.47
Nde1-201ENSMUST00000023359 Top2bQ64511 1612 aa24.2■■□□□ 1.46
Nde1-201ENSMUST00000023359 Ehmt2Q9Z148 1263 aaKnown RBP24.16■■□□□ 1.46
Nde1-201ENSMUST00000023359 Atad2bE9Q166 1460 aaKnown RBP24.14■■□□□ 1.45
Nde1-201ENSMUST00000023359 Pds5bQ4VA53 1446 aaKnown RBP24.09■■□□□ 1.45
Nde1-201ENSMUST00000023359 Gab3Q8BSM5 595 aa24.07■■□□□ 1.44
Nde1-201ENSMUST00000023359 Cc2d2aQ8CFW7 1633 aa24.04■■□□□ 1.44
Nde1-201ENSMUST00000023359 Fmn1Q05860 1466 aa23.84■■□□□ 1.41
Nde1-201ENSMUST00000023359 Rpgrip1Q9EPQ2 1331 aa23.79■■□□□ 1.4
Nde1-201ENSMUST00000023359 Frmpd1A2AKB4 1549 aa23.77■■□□□ 1.4
Nde1-201ENSMUST00000023359 Acin1Q9JIX8 1338 aaKnown RBP23.77■■□□□ 1.4
Nde1-201ENSMUST00000023359 Wdr62Q3U3T8 1523 aa23.77■■□□□ 1.4
Nde1-201ENSMUST00000023359 Ercc6F8VPZ5 1481 aa23.7■■□□□ 1.38
Nde1-201ENSMUST00000023359 Top2aQ01320 1528 aaKnown RBP23.68■■□□□ 1.38
Nde1-201ENSMUST00000023359 TnnQ80Z71 1560 aa23.57■■□□□ 1.36
Nde1-201ENSMUST00000023359 Unc13aQ4KUS2 1712 aa23.56■■□□□ 1.36
Nde1-201ENSMUST00000023359 Rapgef2Q8CHG7 1496 aa23.52■■□□□ 1.36
Nde1-201ENSMUST00000023359 Lamc3Q9R0B6 1581 aa23.46■■□□□ 1.35
Nde1-201ENSMUST00000023359 Kif15Q6P9L6 1387 aa23.43■■□□□ 1.34
Nde1-201ENSMUST00000023359 Thoc2B1AZI6 1594 aaKnown RBP23.43■■□□□ 1.34
Nde1-201ENSMUST00000023359 Npm2Q80W85 207 aa23.36■■□□□ 1.33
Nde1-201ENSMUST00000023359 Cep162Q6ZQ06 1403 aa23.35■■□□□ 1.33
Nde1-201ENSMUST00000023359 Il27Q8K3I6 234 aa23.34■■□□□ 1.33
Nde1-201ENSMUST00000023359 Myt1lP97500 1187 aa23.31■■□□□ 1.32
Nde1-201ENSMUST00000023359 Phldb1Q6PDH0 1371 aaKnown RBP23.29■■□□□ 1.32
Nde1-201ENSMUST00000023359 Camsap1A2AHC3 1581 aa23.25■■□□□ 1.31
Nde1-201ENSMUST00000023359 Eif4g1Q6NZJ6 1600 aaKnown RBP23.18■■□□□ 1.3
Nde1-201ENSMUST00000023359 PtprkP35822 1457 aa23.18■■□□□ 1.3
Nde1-201ENSMUST00000023359 Ubl4bQ9CQ84 188 aa23.17■■□□□ 1.3
Nde1-201ENSMUST00000023359 Ccdc18Q640L5 1455 aa23.16■■□□□ 1.3
Nde1-201ENSMUST00000023359 Fam135aQ6NS59 1506 aa23.13■■□□□ 1.29
Nde1-201ENSMUST00000023359 Cux2P70298 1426 aa23.1■■□□□ 1.29
Nde1-201ENSMUST00000023359 NrkQ9R0G8 1455 aa23.08■■□□□ 1.29
Nde1-201ENSMUST00000023359 Shroom4Q1W617 1475 aa23.07■■□□□ 1.28
Nde1-201ENSMUST00000023359 Arhgap35Q91YM2 1499 aa23.07■■□□□ 1.28
Nde1-201ENSMUST00000023359 Grin2bQ01097 1482 aa23.05■■□□□ 1.28
Nde1-201ENSMUST00000023359 Npm1Q61937 292 aaKnown RBP22.99■■□□□ 1.27
Nde1-201ENSMUST00000023359 Mier1Q5UAK0 511 aa22.96■■□□□ 1.27
Nde1-201ENSMUST00000023359 Clip1Q922J3 1391 aa22.95■■□□□ 1.27
Nde1-201ENSMUST00000023359 UbtfP25976 765 aaKnown RBP22.94■■□□□ 1.26
Nde1-201ENSMUST00000023359 Zeb1Q64318 1117 aa22.94■■□□□ 1.26
Nde1-201ENSMUST00000023359 Map3k1P53349 1493 aa22.86■■□□□ 1.25
Nde1-201ENSMUST00000023359 LrpprcQ6PB66 1392 aaKnown RBP22.85■■□□□ 1.25
Nde1-201ENSMUST00000023359 Baz1bQ9Z277 1479 aa22.85■■□□□ 1.25
Nde1-201ENSMUST00000023359 Mroh2bQ7M6Y6 1581 aa22.83■■□□□ 1.24
Nde1-201ENSMUST00000023359 Plekhg3Q4VAC9 1341 aa22.81■■□□□ 1.24
Nde1-201ENSMUST00000023359 Dnajc5bQ9CQ94 199 aa22.79■■□□□ 1.24
Nde1-201ENSMUST00000023359 PogzQ8BZH4 1409 aaKnown RBP22.79■■□□□ 1.24
Nde1-201ENSMUST00000023359 Eea1Q8BL66 1411 aa22.78■■□□□ 1.24
Nde1-201ENSMUST00000023359 Duox2A2AQ99 1517 aa22.77■■□□□ 1.24
Nde1-201ENSMUST00000023359 Efcab5A0JP43 1406 aa22.77■■□□□ 1.23
Nde1-201ENSMUST00000023359 Ap3b1Q9Z1T1 1105 aa22.74■■□□□ 1.23
Nde1-201ENSMUST00000023359 Arap1Q4LDD4 1452 aa22.74■■□□□ 1.23
Nde1-201ENSMUST00000023359 Setd5Q5XJV7 1441 aa22.73■■□□□ 1.23
Nde1-201ENSMUST00000023359 Dhx29Q6PGC1 1365 aaKnown RBP22.69■■□□□ 1.22
Nde1-201ENSMUST00000023359 NefmP08553 848 aa22.69■■□□□ 1.22
Nde1-201ENSMUST00000023359 Mrc2Q64449 1479 aa22.68■■□□□ 1.22
Nde1-201ENSMUST00000023359 AqrQ8CFQ3 1481 aaKnown RBP22.66■■□□□ 1.22
Nde1-201ENSMUST00000023359 Kif21aQ9QXL2 1672 aa22.65■■□□□ 1.22
Nde1-201ENSMUST00000023359 Samd9lQ69Z37 1561 aa22.64■■□□□ 1.22
Nde1-201ENSMUST00000023359 Arhgef5E9Q7D5 1581 aa22.63■■□□□ 1.21
Nde1-201ENSMUST00000023359 Ankrd26Q811D2 1581 aa22.63■■□□□ 1.21
Nde1-201ENSMUST00000023359 Erich3F6QRE9 1637 aa22.59■■□□□ 1.21
Nde1-201ENSMUST00000023359 Crocc2F6XLV1 1638 aa22.59■■□□□ 1.21
Nde1-201ENSMUST00000023359 Carmil1Q6EDY6 1374 aa22.59■■□□□ 1.21
Nde1-201ENSMUST00000023359 SynmQ70IV5 1561 aa22.56■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms