RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Gm11555B1AQ89 175 aa4.74□□□□□ -1.65
Cldn1-201ENSMUST00000023154 Rnase13Q5GAM7 153 aa4.74□□□□□ -1.65
Cldn1-201ENSMUST00000023154 Cox6b2Q80ZN9 88 aa4.72□□□□□ -1.65
Cldn1-201ENSMUST00000023154 A030005K14RikA0A1Y7VNY1 122 aa4.7□□□□□ -1.66
Cldn1-201ENSMUST00000023154 Gm3880A0A1B0GSB3 72 aa4.68□□□□□ -1.66
Cldn1-201ENSMUST00000023154 Gm9821Q8K076 103 aa4.68□□□□□ -1.66
Cldn1-201ENSMUST00000023154 Gm20537G3UYK7 97 aa4.66□□□□□ -1.66
Cldn1-201ENSMUST00000023154 Gm11563B1AQ90 168 aa4.65□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Gm10382Q3V0T5 144 aa4.65□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Krtap4-7Q9D732 168 aa4.65□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Gm17606F6ZL36 78 aa4.64□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Krtap28-13A0A087WQP5 138 aa4.62□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Gm17416Q30KP4 66 aa4.62□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Herc1E9PZP8 4859 aa4.61□□□□□ -1.67
Cldn1-201ENSMUST00000023154 2310057N15RikQ9D6T8 200 aa4.59□□□□□ -1.67
Cldn1-201ENSMUST00000023154 Krtap3-1A2A591 98 aa4.57□□□□□ -1.68
Cldn1-201ENSMUST00000023154 Pla2g10Q9QXX3 151 aa4.57□□□□□ -1.68
Cldn1-201ENSMUST00000023154 Gm9955Q8CEJ8 102 aa4.55□□□□□ -1.68
Cldn1-201ENSMUST00000023154 CriptO70333 101 aa4.55□□□□□ -1.68
Cldn1-201ENSMUST00000023154 2210017I01RikA0A0A6YVV1 95 aa4.53□□□□□ -1.68
Cldn1-201ENSMUST00000023154 Krtap13-1Q8K198 168 aa4.5□□□□□ -1.69
Cldn1-201ENSMUST00000023154 Gm10318A0A1W2P728 225 aa4.46□□□□□ -1.69
Cldn1-201ENSMUST00000023154 Crct1Q6PAI5 102 aa4.46□□□□□ -1.69
Cldn1-201ENSMUST00000023154 Sec61bQ9CQS8 96 aaKnown RBP4.46□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Lce1mQ9CR91 182 aa4.45□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Gm12216A0A1W2P827 62 aa4.44□□□□□ -1.7
Cldn1-201ENSMUST00000023154 A030003K21RikA0A1Y7VIM3 128 aa4.44□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Gm6217A0A1Y7VJK9 128 aa4.44□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Krtap16-3Q8C1I6 86 aa4.43□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Ush2AQ2QI47 5193 aa4.42□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Hmcn2A2AJ76 5100 aa4.41□□□□□ -1.7
Cldn1-201ENSMUST00000023154 Ubr4A2AN08 5180 aa4.39□□□□□ -1.71
Cldn1-201ENSMUST00000023154 Krtap1-5A2A590 122 aa4.38□□□□□ -1.71
Cldn1-201ENSMUST00000023154 ZanO88799 5376 aa4.37□□□□□ -1.71
Cldn1-201ENSMUST00000023154 Krtap19-1Q925H2 87 aa4.37□□□□□ -1.71
Cldn1-201ENSMUST00000023154 Romo1P60603 79 aa4.37□□□□□ -1.71
Cldn1-201ENSMUST00000023154 Krtap19-3Q925H6 87 aa4.35□□□□□ -1.71
Cldn1-201ENSMUST00000023154 BC029722A0A0N4SW31 51 aa4.33□□□□□ -1.72
Cldn1-201ENSMUST00000023154 4932415D10RikA0A1W2P6U8 4986 aa4.32□□□□□ -1.72
Cldn1-201ENSMUST00000023154 Gm21887J3QQ04 176 aa4.32□□□□□ -1.72
Cldn1-201ENSMUST00000023154 A0A286YCP9 139 aa4.31□□□□□ -1.72
Cldn1-201ENSMUST00000023154 Fam229aB2KGE5 128 aa4.29□□□□□ -1.72
Cldn1-201ENSMUST00000023154 Gm19426M0QWC7 77 aa4.28□□□□□ -1.72
Cldn1-201ENSMUST00000023154 B930094E09RikQ8C4T2 136 aa4.27□□□□□ -1.73
Cldn1-201ENSMUST00000023154 Gm18596A0A1W2P860 280 aa4.25□□□□□ -1.73
Cldn1-201ENSMUST00000023154 Krtap1-3A2A588 173 aa4.25□□□□□ -1.73
Cldn1-201ENSMUST00000023154 Fat4Q2PZL6 4981 aa4.25□□□□□ -1.73
Cldn1-201ENSMUST00000023154 Gm19402J3QJV4 266 aa4.23□□□□□ -1.73
Cldn1-201ENSMUST00000023154 Spink7Q6IE32 76 aa4.21□□□□□ -1.74
Cldn1-201ENSMUST00000023154 Gm9789Q8BIG3 52 aa4.19□□□□□ -1.74
Cldn1-201ENSMUST00000023154 LorP18165 486 aa4.16□□□□□ -1.74
Cldn1-201ENSMUST00000023154 Rnf213E9Q555 5152 aaKnown RBP4.15□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Krtap1-4Q3V2D6 188 aa4.14□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Gm17402F6Z0L5 76 aa4.13□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Sprr2a3Q4KL71 83 aa4.12□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Sprr2a1Q9CQK8 83 aa4.12□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Gm7735D3YX18 52 aa4.12□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Prm1P02319 51 aa4.12□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Mp68P56379 58 aa4.11□□□□□ -1.75
Cldn1-201ENSMUST00000023154 A0A1Y7VJ07 166 aa4.1□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Krtap4-2B1AQ85 167 aa4.1□□□□□ -1.75
Cldn1-201ENSMUST00000023154 Lce1jD3YUU5 139 aa4.08□□□□□ -1.76
Cldn1-201ENSMUST00000023154 Gm20538F6Z9R1 75 aa4.02□□□□□ -1.77
Cldn1-201ENSMUST00000023154 Krtap7-1Q9D3I6 87 aa4□□□□□ -1.77
Cldn1-201ENSMUST00000023154 Krtap17-1A2A5X6 109 aa4□□□□□ -1.77
Cldn1-201ENSMUST00000023154 Krtap12-1Q9Z287 130 aa3.99□□□□□ -1.77
Cldn1-201ENSMUST00000023154 SspoQ8CG65 4998 aa3.98□□□□□ -1.77
Cldn1-201ENSMUST00000023154 A030014E15RikA0A1Y7VJV2 120 aa3.98□□□□□ -1.77
Cldn1-201ENSMUST00000023154 Camk2n1Q6QWF9 78 aa3.97□□□□□ -1.77
Cldn1-201ENSMUST00000023154 Gm19668J3QMD1 248 aa3.94□□□□□ -1.78
Cldn1-201ENSMUST00000023154 Krtap19-9aF8WH65 55 aa3.93□□□□□ -1.78
Cldn1-201ENSMUST00000023154 Prm2P07978 107 aa3.89□□□□□ -1.79
Cldn1-201ENSMUST00000023154 Ndufaf8A2AMZ4 74 aa3.88□□□□□ -1.79
Cldn1-201ENSMUST00000023154 Krtap19-2Q925I0 141 aa3.85□□□□□ -1.79
Cldn1-201ENSMUST00000023154 Gm40193A0A1B0GT39 78 aa3.84□□□□□ -1.79
Cldn1-201ENSMUST00000023154 Krtap9-5A2A5X3 358 aa3.83□□□□□ -1.8
Cldn1-201ENSMUST00000023154 Lce1iQ9D6P5 149 aa3.83□□□□□ -1.8
Cldn1-201ENSMUST00000023154 Lce1a2Q9D1K4 149 aa3.79□□□□□ -1.8
Cldn1-201ENSMUST00000023154 Gm10061D3Z714 54 aa3.78□□□□□ -1.8
Cldn1-201ENSMUST00000023154 Muc5bE9Q5I3 4800 aa3.7□□□□□ -1.82
Cldn1-201ENSMUST00000023154 Krtap8-1O08633 61 aa3.66□□□□□ -1.82
Cldn1-201ENSMUST00000023154 Tnp1P10856 55 aa3.65□□□□□ -1.82
Cldn1-201ENSMUST00000023154 Gm6358A0A087WPH4 74 aa3.63□□□□□ -1.83
Cldn1-201ENSMUST00000023154 Krtap19-9bQ99NG9 58 aa3.61□□□□□ -1.83
Cldn1-201ENSMUST00000023154 Gm11569B1AQB1 180 aa3.57□□□□□ -1.84
Cldn1-201ENSMUST00000023154 Mt2P02798 61 aa3.57□□□□□ -1.84
Cldn1-201ENSMUST00000023154 Krtap9-3Q3V2C1 136 aa3.57□□□□□ -1.84
Cldn1-201ENSMUST00000023154 Lce1dQ9D731 133 aa3.52□□□□□ -1.85
Cldn1-201ENSMUST00000023154 Lce1hQ9D6R3 140 aa3.51□□□□□ -1.85
Cldn1-201ENSMUST00000023154 Mdn1A2ANY6 5589 aaKnown RBP3.46□□□□□ -1.85
Cldn1-201ENSMUST00000023154 Gm9112A2AI92 75 aa3.45□□□□□ -1.86
Cldn1-201ENSMUST00000023154 2310046K23RikA0A0A6YVW6 87 aa3.38□□□□□ -1.87
Cldn1-201ENSMUST00000023154 Gm38119A0A0A6YX29 146 aa3.36□□□□□ -1.87
Cldn1-201ENSMUST00000023154 Krtap22-2J3QNX6 67 aa3.34□□□□□ -1.88
Cldn1-201ENSMUST00000023154 Lce1a1Q9CQH5 143 aa3.3□□□□□ -1.88
Cldn1-201ENSMUST00000023154 Lce1gQ9D195 139 aa3.3□□□□□ -1.88
Cldn1-201ENSMUST00000023154 Krtap4-6Q3V4B7 195 aa3.27□□□□□ -1.89
Cldn1-201ENSMUST00000023154 Gm10272F7CZ33 110 aa3.21□□□□□ -1.9
Cldn1-201ENSMUST00000023154 Syne2Q6ZWQ0 6874 aaKnown RBP3.17□□□□□ -1.9
Cldn1-201ENSMUST00000023154 Gm11596B1AQB0 205 aa3.14□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms