RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm3880A0A1B0GSB3 72 aa10,87□□□□□ -0,67
Trim47-201ENSMUST00000021120 Cox6b2Q80ZN9 88 aa10,8□□□□□ -0,68
Trim47-201ENSMUST00000021120 Krtap15-1Q9QZU5 150 aa10,74□□□□□ -0,69
Trim47-201ENSMUST00000021120 Prm2P07978 107 aa10,68□□□□□ -0,7
Trim47-201ENSMUST00000021120 Herc1E9PZP8 4859 aa10,67□□□□□ -0,7
Trim47-201ENSMUST00000021120 Rpl37Q9D823 97 aa10,64□□□□□ -0,71
Trim47-201ENSMUST00000021120 CriptO70333 101 aa10,6□□□□□ -0,71
Trim47-201ENSMUST00000021120 Gm9955Q8CEJ8 102 aa10,52□□□□□ -0,73
Trim47-201ENSMUST00000021120 Gm18596A0A1W2P860 280 aa10,5□□□□□ -0,73
Trim47-201ENSMUST00000021120 Rnase13Q5GAM7 153 aa10,49□□□□□ -0,73
Trim47-201ENSMUST00000021120 Sec61bQ9CQS8 96 aaKnown RBP10,39□□□□□ -0,75
Trim47-201ENSMUST00000021120 Gm10382Q3V0T5 144 aa10,37□□□□□ -0,75
Trim47-201ENSMUST00000021120 Ndufaf8A2AMZ4 74 aa10,34□□□□□ -0,75
Trim47-201ENSMUST00000021120 2310057N15RikQ9D6T8 200 aa10,33□□□□□ -0,76
Trim47-201ENSMUST00000021120 Gm17606F6ZL36 78 aa10,29□□□□□ -0,76
Trim47-201ENSMUST00000021120 Ush2AQ2QI47 5193 aa10,25□□□□□ -0,77
Trim47-201ENSMUST00000021120 Gm17416Q30KP4 66 aa10,23□□□□□ -0,77
Trim47-201ENSMUST00000021120 Prm1P02319 51 aa10,19□□□□□ -0,78
Trim47-201ENSMUST00000021120 Gm9789Q8BIG3 52 aa10,17□□□□□ -0,78
Trim47-201ENSMUST00000021120 Hmcn2A2AJ76 5100 aa10,12□□□□□ -0,79
Trim47-201ENSMUST00000021120 Gm7735D3YX18 52 aa10,11□□□□□ -0,79
Trim47-201ENSMUST00000021120 Krtap3-1A2A591 98 aa10,11□□□□□ -0,79
Trim47-201ENSMUST00000021120 Ubr4A2AN08 5180 aa10,03□□□□□ -0,8
Trim47-201ENSMUST00000021120 Crct1Q6PAI5 102 aa10,01□□□□□ -0,81
Trim47-201ENSMUST00000021120 Krtap16-3Q8C1I6 86 aa9,93□□□□□ -0,82
Trim47-201ENSMUST00000021120 2210017I01RikA0A0A6YVV1 95 aa9,91□□□□□ -0,82
Trim47-201ENSMUST00000021120 Fam229aB2KGE5 128 aa9,91□□□□□ -0,82
Trim47-201ENSMUST00000021120 Gm21887J3QQ04 176 aa9,91□□□□□ -0,82
Trim47-201ENSMUST00000021120 Krtap1-3A2A588 173 aa9,87□□□□□ -0,83
Trim47-201ENSMUST00000021120 4932415D10RikA0A1W2P6U8 4986 aa9,86□□□□□ -0,83
Trim47-201ENSMUST00000021120 Krtap19-1Q925H2 87 aa9,86□□□□□ -0,83
Trim47-201ENSMUST00000021120 Krtap13-1Q8K198 168 aa9,84□□□□□ -0,83
Trim47-201ENSMUST00000021120 Krtap19-3Q925H6 87 aa9,83□□□□□ -0,84
Trim47-201ENSMUST00000021120 Gm10318A0A1W2P728 225 aa9,8□□□□□ -0,84
Trim47-201ENSMUST00000021120 Krtap7-1Q9D3I6 87 aa9,79□□□□□ -0,84
Trim47-201ENSMUST00000021120 B930094E09RikQ8C4T2 136 aa9,78□□□□□ -0,84
Trim47-201ENSMUST00000021120 Gm19426M0QWC7 77 aa9,78□□□□□ -0,84
Trim47-201ENSMUST00000021120 ZanO88799 5376 aa9,71□□□□□ -0,85
Trim47-201ENSMUST00000021120 Gm9112A2AI92 75 aa9,69□□□□□ -0,86
Trim47-201ENSMUST00000021120 Krtap1-5A2A590 122 aa9,68□□□□□ -0,86
Trim47-201ENSMUST00000021120 Gm40193A0A1B0GT39 78 aa9,66□□□□□ -0,86
Trim47-201ENSMUST00000021120 LorP18165 486 aa9,64□□□□□ -0,87
Trim47-201ENSMUST00000021120 Gm19402J3QJV4 266 aa9,63□□□□□ -0,87
Trim47-201ENSMUST00000021120 BC029722A0A0N4SW31 51 aa9,6□□□□□ -0,87
Trim47-201ENSMUST00000021120 Gm17402F6Z0L5 76 aa9,55□□□□□ -0,88
Trim47-201ENSMUST00000021120 Fat4Q2PZL6 4981 aa9,51□□□□□ -0,89
Trim47-201ENSMUST00000021120 Rnf213E9Q555 5152 aaKnown RBP9,48□□□□□ -0,89
Trim47-201ENSMUST00000021120 Krtap1-4Q3V2D6 188 aa9,47□□□□□ -0,89
Trim47-201ENSMUST00000021120 Gm19668J3QMD1 248 aa9,37□□□□□ -0,91
Trim47-201ENSMUST00000021120 Sprr2a3Q4KL71 83 aa9,23□□□□□ -0,93
Trim47-201ENSMUST00000021120 Sprr2a1Q9CQK8 83 aa9,23□□□□□ -0,93
Trim47-201ENSMUST00000021120 SspoQ8CG65 4998 aa9,09□□□□□ -0,95
Trim47-201ENSMUST00000021120 Gm10061D3Z714 54 aa9,07□□□□□ -0,96
Trim47-201ENSMUST00000021120 Spink7Q6IE32 76 aa9,07□□□□□ -0,96
Trim47-201ENSMUST00000021120 Lce1jD3YUU5 139 aa8,95□□□□□ -0,98
Trim47-201ENSMUST00000021120 Krtap12-1Q9Z287 130 aa8,95□□□□□ -0,98
Trim47-201ENSMUST00000021120 Krtap19-9aF8WH65 55 aa8,83□□□□□ -1
Trim47-201ENSMUST00000021120 Krtap19-2Q925I0 141 aa8,78□□□□□ -1
Trim47-201ENSMUST00000021120 Camk2n1Q6QWF9 78 aa8,75□□□□□ -1,01
Trim47-201ENSMUST00000021120 Krtap9-5A2A5X3 358 aa8,74□□□□□ -1,01
Trim47-201ENSMUST00000021120 Krtap17-1A2A5X6 109 aa8,7□□□□□ -1,02
Trim47-201ENSMUST00000021120 Gm11569B1AQB1 180 aa8,69□□□□□ -1,02
Trim47-201ENSMUST00000021120 Muc5bE9Q5I3 4800 aa8,44□□□□□ -1,06
Trim47-201ENSMUST00000021120 Tnp1P10856 55 aa8,41□□□□□ -1,06
Trim47-201ENSMUST00000021120 Lce1iQ9D6P5 149 aa8,4□□□□□ -1,06
Trim47-201ENSMUST00000021120 Gm6358A0A087WPH4 74 aa8,33□□□□□ -1,08
Trim47-201ENSMUST00000021120 Lce1a2Q9D1K4 149 aa8,29□□□□□ -1,08
Trim47-201ENSMUST00000021120 Krtap4-2B1AQ85 167 aa8,13□□□□□ -1,11
Trim47-201ENSMUST00000021120 Lce1gQ9D195 139 aa8,1□□□□□ -1,11
Trim47-201ENSMUST00000021120 Mt2P02798 61 aa8,09□□□□□ -1,11
Trim47-201ENSMUST00000021120 2310046K23RikA0A0A6YVW6 87 aa8,09□□□□□ -1,12
Trim47-201ENSMUST00000021120 Krtap8-1O08633 61 aa8,05□□□□□ -1,12
Trim47-201ENSMUST00000021120 Gm11555B1AQ89 175 aa8,02□□□□□ -1,13
Trim47-201ENSMUST00000021120 Mdn1A2ANY6 5589 aaKnown RBP8,02□□□□□ -1,13
Trim47-201ENSMUST00000021120 Krtap4-6Q3V4B7 195 aa7,95□□□□□ -1,14
Trim47-201ENSMUST00000021120 Gm11562A0PK51 136 aa7,95□□□□□ -1,14
Trim47-201ENSMUST00000021120 Krtap19-9bQ99NG9 58 aa7,9□□□□□ -1,14
Trim47-201ENSMUST00000021120 Gm11596B1AQB0 205 aa7,84□□□□□ -1,15
Trim47-201ENSMUST00000021120 Syne2Q6ZWQ0 6874 aaKnown RBP7,83□□□□□ -1,16
Trim47-201ENSMUST00000021120 Krtap4-1Q3UUY3 169 aa7,79□□□□□ -1,16
Trim47-201ENSMUST00000021120 Krtap22-2J3QNX6 67 aa7,67□□□□□ -1,18
Trim47-201ENSMUST00000021120 Krtap9-3Q3V2C1 136 aa7,65□□□□□ -1,18
Trim47-201ENSMUST00000021120 Gm11564A2A4L9 201 aa7,58□□□□□ -1,2
Trim47-201ENSMUST00000021120 Gm11563B1AQ90 168 aa7,58□□□□□ -1,2
Trim47-201ENSMUST00000021120 Gm11595B1AQA7 289 aa7,58□□□□□ -1,2
Trim47-201ENSMUST00000021120 Krtap4-8B1AQA8 209 aa7,58□□□□□ -1,2
Trim47-201ENSMUST00000021120 Lce1hQ9D6R3 140 aa7,58□□□□□ -1,2
Trim47-201ENSMUST00000021120 Krtap4-9B1AQA9 244 aa7,38□□□□□ -1,23
Trim47-201ENSMUST00000021120 Mt4P47945 62 aa7,37□□□□□ -1,23
Trim47-201ENSMUST00000021120 Lce1dQ9D731 133 aa7,29□□□□□ -1,24
Trim47-201ENSMUST00000021120 4933428G20RikQ9D3X4 101 aa7,21□□□□□ -1,25
Trim47-201ENSMUST00000021120 Lce1bQ9D149 137 aa7,2□□□□□ -1,26
Trim47-201ENSMUST00000021120 Fsip2A2ARZ3 6995 aa7,19□□□□□ -1,26
Trim47-201ENSMUST00000021120 Sprr2gO70558 76 aa7,19□□□□□ -1,26
Trim47-201ENSMUST00000021120 Gm38119A0A0A6YX29 146 aa7,12□□□□□ -1,27
Trim47-201ENSMUST00000021120 Krtap4-13Q9D7P3 165 aa7,11□□□□□ -1,27
Trim47-201ENSMUST00000021120 Sprr2dO70555 85 aa7,05□□□□□ -1,28
Trim47-201ENSMUST00000021120 Gm11938Q9D3H4 131 aa7,05□□□□□ -1,28
Trim47-201ENSMUST00000021120 Lce1eQ9D139 143 aa7,04□□□□□ -1,28
Trim47-201ENSMUST00000021120 Sprr2kO70562 68 aa7,03□□□□□ -1,28
Retrieved 100 of 22,080 RNA–protein pairs in 44,8 ms