RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Krtap3-1A2A591 98 aa7.18□□□□□ -1.26
Ercc1-201ENSMUST00000003645 Cox6b2Q80ZN9 88 aa7.18□□□□□ -1.26
Ercc1-201ENSMUST00000003645 Cdc42se1Q8BHL7 80 aa7.16□□□□□ -1.26
Ercc1-201ENSMUST00000003645 SptssbQ925E8 76 aa7.16□□□□□ -1.26
Ercc1-201ENSMUST00000003645 SmcpP15265 143 aa7.15□□□□□ -1.26
Ercc1-201ENSMUST00000003645 Smim20D3Z7Q2 69 aa7.12□□□□□ -1.27
Ercc1-201ENSMUST00000003645 SvipQ3UZP4 77 aa7.12□□□□□ -1.27
Ercc1-201ENSMUST00000003645 Gm20661K7N787 53 aa7.1□□□□□ -1.27
Ercc1-201ENSMUST00000003645 Gm10197F6QEY5 67 aa7.06□□□□□ -1.28
Ercc1-201ENSMUST00000003645 Serp1Q9Z1W5 66 aa7.06□□□□□ -1.28
Ercc1-201ENSMUST00000003645 Gm17606F6ZL36 78 aa7.02□□□□□ -1.29
Ercc1-201ENSMUST00000003645 Phxr4P15974 95 aa6.99□□□□□ -1.29
Ercc1-201ENSMUST00000003645 H2al1aQ5M8Q2 105 aa6.99□□□□□ -1.29
Ercc1-201ENSMUST00000003645 H2al1eQ810S6 105 aa6.99□□□□□ -1.29
Ercc1-201ENSMUST00000003645 Brk1Q91VR8 75 aa6.99□□□□□ -1.29
Ercc1-201ENSMUST00000003645 Rps28P62858 69 aaKnown RBP6.98□□□□□ -1.29
Ercc1-201ENSMUST00000003645 Gm10061D3Z714 54 aa6.95□□□□□ -1.3
Ercc1-201ENSMUST00000003645 Gm10382Q3V0T5 144 aa6.93□□□□□ -1.3
Ercc1-201ENSMUST00000003645 Uqcr11Q9CPX8 56 aa6.92□□□□□ -1.3
Ercc1-201ENSMUST00000003645 SspoQ8CG65 4998 aa6.91□□□□□ -1.3
Ercc1-201ENSMUST00000003645 Gm20537G3UYK7 97 aa6.91□□□□□ -1.3
Ercc1-201ENSMUST00000003645 BC029722A0A0N4SW31 51 aa6.87□□□□□ -1.31
Ercc1-201ENSMUST00000003645 H2al1bA0A087WP11 105 aa6.86□□□□□ -1.31
Ercc1-201ENSMUST00000003645 Limd2Q8BGB5 128 aa6.86□□□□□ -1.31
Ercc1-201ENSMUST00000003645 Gm19426M0QWC7 77 aa6.85□□□□□ -1.31
Ercc1-201ENSMUST00000003645 Ndufb1P0DN34 57 aa6.79□□□□□ -1.32
Ercc1-201ENSMUST00000003645 Sec61gP60060 68 aa6.76□□□□□ -1.33
Ercc1-201ENSMUST00000003645 Lce1jD3YUU5 139 aa6.71□□□□□ -1.33
Ercc1-201ENSMUST00000003645 Krtap12-1Q9Z287 130 aa6.7□□□□□ -1.34
Ercc1-201ENSMUST00000003645 Gm11569B1AQB1 180 aa6.69□□□□□ -1.34
Ercc1-201ENSMUST00000003645 CriptO70333 101 aa6.66□□□□□ -1.34
Ercc1-201ENSMUST00000003645 Gm9955Q8CEJ8 102 aa6.64□□□□□ -1.35
Ercc1-201ENSMUST00000003645 Krtap19-2Q925I0 141 aa6.63□□□□□ -1.35
Ercc1-201ENSMUST00000003645 Krtap9-5A2A5X3 358 aa6.6□□□□□ -1.35
Ercc1-201ENSMUST00000003645 Krtap17-1A2A5X6 109 aa6.59□□□□□ -1.35
Ercc1-201ENSMUST00000003645 Krtap19-9aF8WH65 55 aa6.58□□□□□ -1.36
Ercc1-201ENSMUST00000003645 Spink7Q6IE32 76 aa6.57□□□□□ -1.36
Ercc1-201ENSMUST00000003645 Gm10337F7DEP7 55 aa6.56□□□□□ -1.36
Ercc1-201ENSMUST00000003645 B930094E09RikQ8C4T2 136 aa6.52□□□□□ -1.37
Ercc1-201ENSMUST00000003645 Gm17402F6Z0L5 76 aa6.51□□□□□ -1.37
Ercc1-201ENSMUST00000003645 Prm2P07978 107 aa6.51□□□□□ -1.37
Ercc1-201ENSMUST00000003645 H2al1kJ3QP08 105 aa6.49□□□□□ -1.37
Ercc1-201ENSMUST00000003645 H2al1mQ9DAD9 105 aa6.49□□□□□ -1.37
Ercc1-201ENSMUST00000003645 Sprr2a3Q4KL71 83 aa6.46□□□□□ -1.37
Ercc1-201ENSMUST00000003645 Sprr2a1Q9CQK8 83 aa6.46□□□□□ -1.37
Ercc1-201ENSMUST00000003645 Pla2g10Q9QXX3 151 aa6.45□□□□□ -1.38
Ercc1-201ENSMUST00000003645 4933415A04RikQ9D443 101 aa6.43□□□□□ -1.38
Ercc1-201ENSMUST00000003645 Gm11562A0PK51 136 aa6.4□□□□□ -1.39
Ercc1-201ENSMUST00000003645 Sox16Q62247 57 aa6.4□□□□□ -1.39
Ercc1-201ENSMUST00000003645 Muc5bE9Q5I3 4800 aa6.38□□□□□ -1.39
Ercc1-201ENSMUST00000003645 Gm6358A0A087WPH4 74 aa6.31□□□□□ -1.4
Ercc1-201ENSMUST00000003645 Krtap4-2B1AQ85 167 aa6.31□□□□□ -1.4
Ercc1-201ENSMUST00000003645 Lce1iQ9D6P5 149 aa6.31□□□□□ -1.4
Ercc1-201ENSMUST00000003645 Lce1gQ9D195 139 aa6.29□□□□□ -1.4
Ercc1-201ENSMUST00000003645 Gm11555B1AQ89 175 aa6.25□□□□□ -1.41
Ercc1-201ENSMUST00000003645 Lce1a2Q9D1K4 149 aa6.21□□□□□ -1.41
Ercc1-201ENSMUST00000003645 Gm3880A0A1B0GSB3 72 aa6.19□□□□□ -1.42
Ercc1-201ENSMUST00000003645 Gm19668J3QMD1 248 aa6.16□□□□□ -1.42
Ercc1-201ENSMUST00000003645 Ndufs5Q99LY9 106 aa6.16□□□□□ -1.42
Ercc1-201ENSMUST00000003645 Gm3646F6S692 53 aa6.14□□□□□ -1.43
Ercc1-201ENSMUST00000003645 Krtap4-6Q3V4B7 195 aa6.1□□□□□ -1.43
Ercc1-201ENSMUST00000003645 Syne2Q6ZWQ0 6874 aaKnown RBP6.07□□□□□ -1.44
Ercc1-201ENSMUST00000003645 Gm11596B1AQB0 205 aa6.07□□□□□ -1.44
Ercc1-201ENSMUST00000003645 Mt2P02798 61 aa6.06□□□□□ -1.44
Ercc1-201ENSMUST00000003645 Gm21887J3QQ04 176 aa6.02□□□□□ -1.45
Ercc1-201ENSMUST00000003645 Krtap4-1Q3UUY3 169 aa6□□□□□ -1.45
Ercc1-201ENSMUST00000003645 Mdn1A2ANY6 5589 aaKnown RBP5.98□□□□□ -1.45
Ercc1-201ENSMUST00000003645 Gm12216A0A1W2P827 62 aa5.93□□□□□ -1.46
Ercc1-201ENSMUST00000003645 Camk2n1Q6QWF9 78 aa5.93□□□□□ -1.46
Ercc1-201ENSMUST00000003645 Romo1P60603 79 aa5.88□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Gm11564A2A4L9 201 aa5.84□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Gm11563B1AQ90 168 aa5.84□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Gm11595B1AQA7 289 aa5.84□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Krtap4-8B1AQA8 209 aa5.84□□□□□ -1.47
Ercc1-201ENSMUST00000003645 Krtap19-9bQ99NG9 58 aa5.83□□□□□ -1.48
Ercc1-201ENSMUST00000003645 Krtap22-2J3QNX6 67 aa5.76□□□□□ -1.49
Ercc1-201ENSMUST00000003645 Krtap9-3Q3V2C1 136 aa5.7□□□□□ -1.5
Ercc1-201ENSMUST00000003645 Krtap4-9B1AQA9 244 aa5.67□□□□□ -1.5
Ercc1-201ENSMUST00000003645 Mt4P47945 62 aa5.62□□□□□ -1.51
Ercc1-201ENSMUST00000003645 Lce1bQ9D149 137 aa5.56□□□□□ -1.52
Ercc1-201ENSMUST00000003645 Fsip2A2ARZ3 6995 aa5.48□□□□□ -1.53
Ercc1-201ENSMUST00000003645 Krtap4-13Q9D7P3 165 aa5.45□□□□□ -1.54
Ercc1-201ENSMUST00000003645 Lce1hQ9D6R3 140 aa5.42□□□□□ -1.54
Ercc1-201ENSMUST00000003645 Krtap7-1Q9D3I6 87 aa5.42□□□□□ -1.54
Ercc1-201ENSMUST00000003645 Gm38119A0A0A6YX29 146 aa5.38□□□□□ -1.55
Ercc1-201ENSMUST00000003645 Gm40193A0A1B0GT39 78 aa5.35□□□□□ -1.55
Ercc1-201ENSMUST00000003645 2300003K06RikA2A4M0 262 aa5.33□□□□□ -1.56
Ercc1-201ENSMUST00000003645 Sprr2kO70562 68 aa5.32□□□□□ -1.56
Ercc1-201ENSMUST00000003645 Krtap6-3A0A087WQL6 57 aa5.31□□□□□ -1.56
Ercc1-201ENSMUST00000003645 Tnp1P10856 55 aa5.29□□□□□ -1.56
Ercc1-201ENSMUST00000003645 Krtap4-7Q9D732 168 aa5.21□□□□□ -1.58
Ercc1-201ENSMUST00000003645 Lce1lQ9D1G7 135 aa5.16□□□□□ -1.58
Ercc1-201ENSMUST00000003645 Gm10272F7CZ33 110 aa5.12□□□□□ -1.59
Ercc1-201ENSMUST00000003645 2310046K23RikA0A0A6YVW6 87 aa5.04□□□□□ -1.6
Ercc1-201ENSMUST00000003645 Lce1dQ9D731 133 aa5.04□□□□□ -1.6
Ercc1-201ENSMUST00000003645 A0A1Y7VJH8 109 aa5.02□□□□□ -1.61
Ercc1-201ENSMUST00000003645 Mp68P56379 58 aa5.01□□□□□ -1.61
Ercc1-201ENSMUST00000003645 Gm20538F6Z9R1 75 aa4.99□□□□□ -1.61
Ercc1-201ENSMUST00000003645 Sprr2gO70558 76 aa4.95□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms