RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Gm20538F6Z9R1 75 aa3.97□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 2310079G19RikQ9D6L6 185 aa3.96□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Rpl37Q9D823 97 aa3.96□□□□□ -1.77
Crnkl1-201ENSMUST00000001818 Sec61bQ9CQS8 96 aaKnown RBP3.95□□□□□ -1.78
Crnkl1-201ENSMUST00000001818 Uqcr11Q9CPX8 56 aa3.92□□□□□ -1.78
Crnkl1-201ENSMUST00000001818 Limd2Q8BGB5 128 aa3.91□□□□□ -1.78
Crnkl1-201ENSMUST00000001818 Mp68P56379 58 aa3.91□□□□□ -1.78
Crnkl1-201ENSMUST00000001818 Crct1Q6PAI5 102 aa3.91□□□□□ -1.78
Crnkl1-201ENSMUST00000001818 Gm17606F6ZL36 78 aa3.88□□□□□ -1.79
Crnkl1-201ENSMUST00000001818 Gm10382Q3V0T5 144 aa3.87□□□□□ -1.79
Crnkl1-201ENSMUST00000001818 Ubr4A2AN08 5180 aa3.85□□□□□ -1.79
Crnkl1-201ENSMUST00000001818 Gm3880A0A1B0GSB3 72 aa3.85□□□□□ -1.79
Crnkl1-201ENSMUST00000001818 CriptO70333 101 aa3.83□□□□□ -1.8
Crnkl1-201ENSMUST00000001818 Cox6b2Q80ZN9 88 aa3.83□□□□□ -1.8
Crnkl1-201ENSMUST00000001818 Fam229aB2KGE5 128 aa3.82□□□□□ -1.8
Crnkl1-201ENSMUST00000001818 Ush2AQ2QI47 5193 aa3.81□□□□□ -1.8
Crnkl1-201ENSMUST00000001818 Krtap4-1Q3UUY3 169 aa3.79□□□□□ -1.8
Crnkl1-201ENSMUST00000001818 Gm17416Q30KP4 66 aa3.75□□□□□ -1.81
Crnkl1-201ENSMUST00000001818 Gm20537G3UYK7 97 aa3.74□□□□□ -1.81
Crnkl1-201ENSMUST00000001818 Prm1P02319 51 aa3.73□□□□□ -1.81
Crnkl1-201ENSMUST00000001818 Gm7735D3YX18 52 aa3.73□□□□□ -1.81
Crnkl1-201ENSMUST00000001818 Romo1P60603 79 aa3.72□□□□□ -1.81
Crnkl1-201ENSMUST00000001818 Gm9789Q8BIG3 52 aa3.7□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Hmcn2A2AJ76 5100 aa3.7□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Pla2g10Q9QXX3 151 aa3.7□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 4932415D10RikA0A1W2P6U8 4986 aa3.7□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 LorP18165 486 aa3.69□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Krtap13-1Q8K198 168 aa3.68□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Fat4Q2PZL6 4981 aa3.67□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Gm9955Q8CEJ8 102 aa3.67□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 2210017I01RikA0A0A6YVV1 95 aa3.66□□□□□ -1.82
Crnkl1-201ENSMUST00000001818 Spink7Q6IE32 76 aa3.65□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Krtap1-3A2A588 173 aa3.64□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Krtap3-1A2A591 98 aa3.64□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Krtap16-3Q8C1I6 86 aa3.64□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 ZanO88799 5376 aa3.64□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Krtap19-3Q925H6 87 aa3.61□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Gm19426M0QWC7 77 aa3.61□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Krtap19-1Q925H2 87 aa3.6□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 BC029722A0A0N4SW31 51 aa3.6□□□□□ -1.83
Crnkl1-201ENSMUST00000001818 Ndufaf8A2AMZ4 74 aa3.58□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 Gm19402J3QJV4 266 aa3.57□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 A0A1Y7VJH8 109 aa3.55□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 Rnf213E9Q555 5152 aaKnown RBP3.55□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 Gm11563B1AQ90 168 aa3.53□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 Krtap4-7Q9D732 168 aa3.53□□□□□ -1.84
Crnkl1-201ENSMUST00000001818 Krtap1-5A2A590 122 aa3.52□□□□□ -1.85
Crnkl1-201ENSMUST00000001818 Gm11555B1AQ89 175 aa3.48□□□□□ -1.85
Crnkl1-201ENSMUST00000001818 B930094E09RikQ8C4T2 136 aa3.46□□□□□ -1.86
Crnkl1-201ENSMUST00000001818 Gm9112A2AI92 75 aa3.45□□□□□ -1.86
Crnkl1-201ENSMUST00000001818 Krtap28-10A0A1Y7VP58 119 aa3.44□□□□□ -1.86
Crnkl1-201ENSMUST00000001818 Krtap1-4Q3V2D6 188 aa3.41□□□□□ -1.86
Crnkl1-201ENSMUST00000001818 Gm10061D3Z714 54 aa3.37□□□□□ -1.87
Crnkl1-201ENSMUST00000001818 Krtap17-1A2A5X6 109 aa3.34□□□□□ -1.87
Crnkl1-201ENSMUST00000001818 Krtap12-1Q9Z287 130 aa3.33□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 Lce1jD3YUU5 139 aa3.33□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 Camk2n1Q6QWF9 78 aa3.33□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 A0A1Y7VLE6 161 aa3.29□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 Krtap9-5A2A5X3 358 aa3.29□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 Mdn1A2ANY6 5589 aaKnown RBP3.29□□□□□ -1.88
Crnkl1-201ENSMUST00000001818 Gm7544A0A1Y7VJ58 118 aa3.28□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Krtap19-9aF8WH65 55 aa3.28□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Gm11569B1AQB1 180 aa3.27□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Krtap28-13A0A087WQP5 138 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Sprr2a3Q4KL71 83 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Krtap19-2Q925I0 141 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Sprr2a1Q9CQK8 83 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 A030005L19RikA0A1Y7VIU2 113 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Krtap4-2B1AQ85 167 aa3.25□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Gm19668J3QMD1 248 aa3.22□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 SspoQ8CG65 4998 aa3.22□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 Gm17402F6Z0L5 76 aa3.22□□□□□ -1.89
Crnkl1-201ENSMUST00000001818 A030005K14RikA0A1Y7VNY1 122 aa3.15□□□□□ -1.9
Crnkl1-201ENSMUST00000001818 Krtap7-1Q9D3I6 87 aa3.12□□□□□ -1.91
Crnkl1-201ENSMUST00000001818 Gm6358A0A087WPH4 74 aa3.09□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Lce1iQ9D6P5 149 aa3.09□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Muc5bE9Q5I3 4800 aa3.07□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Lce1gQ9D195 139 aa3.06□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Lce1a2Q9D1K4 149 aa3.06□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Krtap4-6Q3V4B7 195 aa3.04□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Mt2P02798 61 aa3.03□□□□□ -1.92
Crnkl1-201ENSMUST00000001818 Syne2Q6ZWQ0 6874 aaKnown RBP3.02□□□□□ -1.93
Crnkl1-201ENSMUST00000001818 Krtap8-1O08633 61 aa3□□□□□ -1.93
Crnkl1-201ENSMUST00000001818 Fsip2A2ARZ3 6995 aa2.98□□□□□ -1.93
Crnkl1-201ENSMUST00000001818 Gm40193A0A1B0GT39 78 aa2.97□□□□□ -1.93
Crnkl1-201ENSMUST00000001818 Gm11596B1AQB0 205 aa2.96□□□□□ -1.94
Crnkl1-201ENSMUST00000001818 Krtap31-1Q9D644 177 aa2.96□□□□□ -1.94
Crnkl1-201ENSMUST00000001818 Tnp1P10856 55 aa2.96□□□□□ -1.94
Crnkl1-201ENSMUST00000001818 Krtap9-3Q3V2C1 136 aa2.93□□□□□ -1.94
Crnkl1-201ENSMUST00000001818 Krtap19-9bQ99NG9 58 aa2.93□□□□□ -1.94
Crnkl1-201ENSMUST00000001818 Gm11562A0PK51 136 aa2.9□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Krtap22-2J3QNX6 67 aa2.89□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Gm11564A2A4L9 201 aa2.88□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Gm11595B1AQA7 289 aa2.88□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Krtap4-8B1AQA8 209 aa2.88□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 A030003K21RikA0A1Y7VIM3 128 aa2.86□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Gm6217A0A1Y7VJK9 128 aa2.86□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Mt4P47945 62 aa2.85□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Lce1hQ9D6R3 140 aa2.84□□□□□ -1.95
Crnkl1-201ENSMUST00000001818 Krtap4-9B1AQA9 244 aa2.83□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms