RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 SHY1P53266 389 aa-0.06□□□□□ -2.42
snR38snR38 RCR2Q03446 210 aaKnown RBP-0.06□□□□□ -2.42
snR38snR38 YMR027WQ04371 470 aa-0.06□□□□□ -2.42
snR38snR38 ARR3Q06598 404 aa-0.06□□□□□ -2.42
snR38snR38 THI3Q07471 609 aa-0.06□□□□□ -2.42
snR38snR38 SEC12P11655 471 aa-0.07□□□□□ -2.42
snR38snR38 HSP60P19882 572 aaKnown RBP-0.07□□□□□ -2.42
snR38snR38 ISY1P21374 235 aaPredicted RBP-0.07□□□□□ -2.42
snR38snR38 CBP3P21560 335 aa-0.07□□□□□ -2.42
snR38snR38 RPL8BP29453 256 aaKnown RBP-0.07□□□□□ -2.42
snR38snR38 PDR3P33200 976 aa-0.07□□□□□ -2.42
snR38snR38 LOS1P33418 1100 aaPredicted RBP-0.07□□□□□ -2.42
snR38snR38 MTC2P34246 357 aa-0.07□□□□□ -2.42
snR38snR38 MNN4P36044 1178 aa-0.07□□□□□ -2.42
snR38snR38 UTH1P36135 365 aa-0.07□□□□□ -2.42
snR38snR38 LNP1P38878 278 aa-0.07□□□□□ -2.42
snR38snR38 SAP1P39955 897 aaKnown RBP-0.07□□□□□ -2.42
snR38snR38 BUD8P41698 603 aa-0.07□□□□□ -2.42
snR38snR38 ASK10P48361 1146 aa-0.07□□□□□ -2.42
snR38snR38 HAL1Q01766 294 aa-0.07□□□□□ -2.42
snR38snR38 PIG1Q06216 648 aa-0.07□□□□□ -2.42
snR38snR38 RRG7Q08774 242 aaPredicted RBP-0.07□□□□□ -2.42
snR38snR38 YPL191CQ08930 360 aa-0.07□□□□□ -2.42
snR38snR38 SET6Q12529 373 aa-0.07□□□□□ -2.42
snR38snR38 SPT15P13393 240 aaKnown RBP-0.08□□□□□ -2.42
snR38snR38 VPS33P20795 691 aa-0.08□□□□□ -2.42
snR38snR38 MCK1P21965 375 aaKnown RBP-0.08□□□□□ -2.42
snR38snR38 PTC6P25646 442 aa-0.08□□□□□ -2.42
snR38snR38 DSS4P32601 143 aa-0.08□□□□□ -2.42
snR38snR38 SDH8P38345 138 aa-0.08□□□□□ -2.42
snR38snR38 RPH1P39956 796 aa-0.08□□□□□ -2.42
snR38snR38 NUG1P40010 520 aaKnown RBP-0.08□□□□□ -2.42
snR38snR38 TAF4P50105 388 aa-0.08□□□□□ -2.42
snR38snR38 EAF7P53911 425 aaKnown RBP-0.08□□□□□ -2.42
snR38snR38 UBP16Q02863 499 aa-0.08□□□□□ -2.42
snR38snR38 CTL1Q03220 320 aaKnown RBP-0.08□□□□□ -2.42
snR38snR38 NSE5Q03718 556 aa-0.08□□□□□ -2.42
snR38snR38 CIA1Q05583 330 aa-0.08□□□□□ -2.42
snR38snR38 PIN2Q12057 282 aa-0.08□□□□□ -2.42
snR38snR38 LCB4Q12246 624 aa-0.08□□□□□ -2.42
snR38snR38 GIN4Q12263 1142 aa-0.08□□□□□ -2.42
snR38snR38 IME1P21190 360 aa-0.09□□□□□ -2.42
snR38snR38 HOG1P32485 435 aa-0.09□□□□□ -2.42
snR38snR38 YKU70P32807 602 aa-0.09□□□□□ -2.42
snR38snR38 YPT35P38815 214 aaKnown RBP-0.09□□□□□ -2.42
snR38snR38 CHS6P40955 746 aa-0.09□□□□□ -2.42
snR38snR38 CAF16P43569 289 aa-0.09□□□□□ -2.42
snR38snR38 COS10P52924 374 aa-0.09□□□□□ -2.42
snR38snR38 MET13P53128 600 aa-0.09□□□□□ -2.42
snR38snR38 YNL092WP53934 400 aa-0.09□□□□□ -2.42
snR38snR38 MOT3P54785 490 aaKnown RBP-0.09□□□□□ -2.42
snR38snR38 RRP15Q06511 250 aaPredicted RBP-0.09□□□□□ -2.42
snR38snR38 MCP2Q06567 569 aa-0.09□□□□□ -2.42
snR38snR38 YCG1Q06680 1035 aa-0.09□□□□□ -2.42
snR38snR38 GRC3Q07845 632 aa-0.09□□□□□ -2.42
snR38snR38 RPL15AP05748 204 aaKnown RBP-0.1□□□□□ -2.43
snR38snR38 SES1P07284 462 aaKnown RBP-0.1□□□□□ -2.43
snR38snR38 RVS161P25343 265 aaKnown RBP-0.1□□□□□ -2.43
snR38snR38 PRP45P28004 379 aaPredicted RBP-0.1□□□□□ -2.43
snR38snR38 YBL059WP34224 193 aa-0.1□□□□□ -2.43
snR38snR38 PRM2P40534 656 aa-0.1□□□□□ -2.43
snR38snR38 YFR016CP43597 1233 aaKnown RBP-0.1□□□□□ -2.43
snR38snR38 MAK10Q02197 733 aa-0.1□□□□□ -2.43
snR38snR38 ECM11Q04110 302 aa-0.1□□□□□ -2.43
snR38snR38 ERP1Q05359 219 aaKnown RBP-0.1□□□□□ -2.43
snR38snR38 TRE2Q08693 809 aa-0.1□□□□□ -2.43
snR38snR38 YOR387CQ08910 206 aa-0.1□□□□□ -2.43
snR38snR38 LEA1Q08963 238 aaPredicted RBP-0.1□□□□□ -2.43
snR38snR38 FAP7Q12055 197 aaPredicted RBP-0.1□□□□□ -2.43
snR38snR38 HRT3Q12347 344 aa-0.1□□□□□ -2.43
snR38snR38 MRS3P10566 314 aa-0.11□□□□□ -2.43
snR38snR38 PMR1P13586 950 aa-0.11□□□□□ -2.43
snR38snR38 MTF1P14908 341 aaKnown RBP-0.11□□□□□ -2.43
snR38snR38 ARG1P22768 420 aa-0.11□□□□□ -2.43
snR38snR38 PCL1P24867 279 aa-0.11□□□□□ -2.43
snR38snR38 YCR006CP25350 157 aa-0.11□□□□□ -2.43
snR38snR38 CDS1P38221 457 aa-0.11□□□□□ -2.43
snR38snR38 EHT1P38295 451 aa-0.11□□□□□ -2.43
snR38snR38 VBA2P38358 474 aaKnown RBP-0.11□□□□□ -2.43
snR38snR38 NDT80P38830 627 aa-0.11□□□□□ -2.43
snR38snR38 YML119WQ03208 357 aa-0.11□□□□□ -2.43
snR38snR38 TAF8Q03750 510 aa-0.11□□□□□ -2.43
snR38snR38 YML053CQ04978 212 aa-0.11□□□□□ -2.43
snR38snR38 HCR1Q05775 265 aaKnown RBP-0.11□□□□□ -2.43
snR38snR38 YLR407WQ06070 228 aa-0.11□□□□□ -2.43
snR38snR38 YEH2Q07950 538 aa-0.11□□□□□ -2.43
snR38snR38 FRE3Q08905 711 aa-0.11□□□□□ -2.43
snR38snR38 KGD2P19262 463 aaPredicted RBP-0.12□□□□□ -2.43
snR38snR38 AMD2P22580 549 aa-0.12□□□□□ -2.43
snR38snR38 MIH1P23748 554 aa-0.12□□□□□ -2.43
snR38snR38 NAM9P27929 486 aa-0.12□□□□□ -2.43
snR38snR38 YHR131CP38835 850 aa-0.12□□□□□ -2.43
snR38snR38 IKS1P47042 667 aa-0.12□□□□□ -2.43
snR38snR38 RTT101P47050 842 aa-0.12□□□□□ -2.43
snR38snR38 ARK1P53974 638 aa-0.12□□□□□ -2.43
snR38snR38 TSA2Q04120 196 aa-0.12□□□□□ -2.43
snR38snR38 YDL242WQ07746 117 aa-0.12□□□□□ -2.43
snR38snR38 DCS2Q12123 353 aa-0.12□□□□□ -2.43
snR38snR38 RBD2Q12270 262 aa-0.12□□□□□ -2.43
snR38snR38 HHF1P02309 103 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms