RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	YPL071C	Q02864	156 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	AFT2	Q08957	416 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	PSA1	P41940	361 aa	Known RBP	4.87	□□□□□ -1.63
RPN8	YOR261C	IRC7	P43623	340 aa		4.87	□□□□□ -1.63
RPN8	YOR261C	TAM41	P53230	385 aa		4.87	□□□□□ -1.63
RPN8	YOR261C	CIA1	Q05583	330 aa		4.87	□□□□□ -1.63
RPN8	YOR261C	RVB2	Q12464	471 aa	Known RBP	4.87	□□□□□ -1.63
RPN8	YOR261C	COX1	P00401	534 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	YMR085W	P0CF18	432 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	APA1	P16550	321 aa	Known RBP	4.86	□□□□□ -1.63
RPN8	YOR261C	PHO81	P17442	1178 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	SIP1	P32578	815 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	FSH1	P38777	243 aa	Known RBP	4.86	□□□□□ -1.63
RPN8	YOR261C	UBP7	P40453	1071 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	ERG13	P54839	491 aa	Known RBP	4.86	□□□□□ -1.63
RPN8	YOR261C	GTB1	Q04924	702 aa		4.86	□□□□□ -1.63
RPN8	YOR261C	PET122	P10355	254 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	PGI1	P12709	554 aa	Known RBP	4.85	□□□□□ -1.63
RPN8	YOR261C	CLB4	P24871	460 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	PTC6	P25646	442 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	SWC3	P31376	625 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	GSH1	P32477	678 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	HES1	P35843	434 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	ERV46	P39727	415 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	AAT1	Q01802	451 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	SNU56	Q03782	492 aa	Known RBP	4.85	□□□□□ -1.63
RPN8	YOR261C	YOR389W	Q08912	624 aa		4.85	□□□□□ -1.63
RPN8	YOR261C	NCP1	P16603	691 aa	Known RBP	4.84	□□□□□ -1.63
RPN8	YOR261C	MSM1	P22438	575 aa		4.84	□□□□□ -1.63
RPN8	YOR261C	ECM32	P32644	1121 aa	Known RBP	4.84	□□□□□ -1.63
RPN8	YOR261C	TPM2	P40414	161 aa		4.84	□□□□□ -1.63
RPN8	YOR261C	YGR079W	P53249	370 aa		4.84	□□□□□ -1.63
RPN8	YOR261C	YAP7	Q08182	245 aa		4.84	□□□□□ -1.63
RPN8	YOR261C	LAC1	P28496	418 aa		4.83	□□□□□ -1.64
RPN8	YOR261C	STP1	Q00947	519 aa		4.83	□□□□□ -1.64
RPN8	YOR261C	MTG1	Q03151	367 aa	Predicted RBP	4.83	□□□□□ -1.64
RPN8	YOR261C	TRS130	Q03660	1102 aa		4.83	□□□□□ -1.64
RPN8	YOR261C	LEA1	Q08963	238 aa	Predicted RBP	4.83	□□□□□ -1.64
RPN8	YOR261C	CRC1	Q12289	327 aa		4.83	□□□□□ -1.64
RPN8	YOR261C	ICT1	Q12385	394 aa		4.83	□□□□□ -1.64
RPN8	YOR261C	ILV2	P07342	687 aa	Known RBP	4.82	□□□□□ -1.64
RPN8	YOR261C	GEX2	P36173	615 aa		4.82	□□□□□ -1.64
RPN8	YOR261C	FUN12	P39730	1002 aa	Known RBP	4.82	□□□□□ -1.64
RPN8	YOR261C	MSY1	P48527	492 aa		4.82	□□□□□ -1.64
RPN8	YOR261C	GLO1	P50107	326 aa		4.82	□□□□□ -1.64
RPN8	YOR261C	ARC35	P53731	342 aa	Known RBP	4.82	□□□□□ -1.64
RPN8	YOR261C	ILS1	P09436	1072 aa	Known RBP	4.81	□□□□□ -1.64
RPN8	YOR261C	YML003W	P0CF16	290 aa		4.81	□□□□□ -1.64
RPN8	YOR261C	SKP2	P42843	763 aa		4.81	□□□□□ -1.64
RPN8	YOR261C	YRB30	P53107	440 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN8	YOR261C	YPR003C	P53394	754 aa		4.81	□□□□□ -1.64
RPN8	YOR261C	COP1	P53622	1201 aa	Known RBP	4.81	□□□□□ -1.64
RPN8	YOR261C	ATG23	Q06671	453 aa		4.81	□□□□□ -1.64
RPN8	YOR261C	YAP1	P19880	650 aa	Known RBP	4.8	□□□□□ -1.64
RPN8	YOR261C	YCL049C	P25577	312 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	COQ3	P27680	312 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	DBF20	P32328	564 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	GCD7	P32502	381 aa	Predicted RBP	4.8	□□□□□ -1.64
RPN8	YOR261C	TMT1	P32643	299 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	FAF1	P40546	346 aa	Predicted RBP	4.8	□□□□□ -1.64
RPN8	YOR261C	CFD1	P40558	293 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	CDC1	P40986	491 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	ZAP1	P47043	880 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	UBX6	P47049	396 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	YDR109C	Q04585	715 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	STP3	Q05937	343 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	VAM6	Q07468	1049 aa		4.8	□□□□□ -1.64
RPN8	YOR261C	GAL4	P04386	881 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YER190C-B	P0CX94	160 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YEL077W-A	P0CX95	160 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YGR296C-B	P0CX96	160 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YPL283W-B	P0CX97	160 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YPR204C-A	P0CX98	160 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YSP3	P25036	478 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	RFA2	P26754	273 aa	Known RBP	4.79	□□□□□ -1.64
RPN8	YOR261C	EXO84	P38261	753 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	NPR3	P38742	1146 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	YIL024C	P40543	189 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	DJP1	P40564	432 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	ERR3	P42222	437 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	GAT1	P43574	510 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	ORC5	P50874	479 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	THI3	Q07471	609 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	GEP3	Q08622	556 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	BAG7	Q12128	409 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	GET3	Q12154	354 aa	Known RBP	4.79	□□□□□ -1.64
RPN8	YOR261C	RGT2	Q12300	763 aa		4.79	□□□□□ -1.64
RPN8	YOR261C	MTF2	P10849	440 aa		4.78	□□□□□ -1.64
RPN8	YOR261C	PHM8	P40025	321 aa		4.78	□□□□□ -1.64
RPN8	YOR261C	IES5	P40060	125 aa		4.78	□□□□□ -1.64
RPN8	YOR261C	PSF2	P40359	213 aa		4.78	□□□□□ -1.64
RPN8	YOR261C	YJL107C	P42947	387 aa		4.78	□□□□□ -1.64
RPN8	YOR261C	YPT1	P01123	206 aa	Known RBP	4.77	□□□□□ -1.65
RPN8	YOR261C	NUC1	P08466	329 aa		4.77	□□□□□ -1.65
RPN8	YOR261C	PCT1	P13259	424 aa		4.77	□□□□□ -1.65
RPN8	YOR261C	LRE1	P25579	583 aa	Known RBP	4.77	□□□□□ -1.65
RPN8	YOR261C	ARN1	P38731	627 aa		4.77	□□□□□ -1.65
RPN8	YOR261C	JHD1	P40034	492 aa		4.77	□□□□□ -1.65
RPN8	YOR261C	MNT3	P40549	630 aa		4.77	□□□□□ -1.65
RPN8	YOR261C	ADE16	P54113	591 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms