RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	PRP9	P19736	530 aa	Known RBP	10.84	□□□□□ -0.67
YSP3	YOR003W	RBK1	P25332	333 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	MGT1	P26188	188 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	CSE1	P33307	960 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	TCD2	P36101	447 aa	Known RBP	10.84	□□□□□ -0.67
YSP3	YOR003W	POP4	P38336	279 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	GIP4	P39732	760 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	ELO3	P40319	345 aa		10.84	□□□□□ -0.67
YSP3	YOR003W	CMS1	Q07897	291 aa	Known RBP	10.84	□□□□□ -0.67
YSP3	YOR003W	CLP1	Q08685	445 aa	Predicted RBP	10.84	□□□□□ -0.67
YSP3	YOR003W	AI4	P03878	556 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	SCH9	P11792	824 aa	Known RBP	10.83	□□□□□ -0.68
YSP3	YOR003W	AAT2	P23542	418 aa	Known RBP	10.83	□□□□□ -0.68
YSP3	YOR003W	TYE7	P33122	291 aa	Predicted RBP	10.83	□□□□□ -0.68
YSP3	YOR003W	KES1	P35844	434 aa	Known RBP	10.83	□□□□□ -0.68
YSP3	YOR003W	ALY1	P36117	915 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	PRM1	P53835	661 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	CAF120	P53836	1060 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	TDA7	P53882	636 aa	Predicted RBP	10.83	□□□□□ -0.68
YSP3	YOR003W	AQR1	P53943	586 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	VAC7	P53950	1165 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	VPS60	Q03390	229 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	LDB17	Q12342	491 aa		10.83	□□□□□ -0.68
YSP3	YOR003W	MSB2	P32334	1306 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	QCR6	P00127	147 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	PMI40	P29952	429 aa	Known RBP	10.82	□□□□□ -0.68
YSP3	YOR003W	PYC2	P32327	1180 aa	Known RBP	10.82	□□□□□ -0.68
YSP3	YOR003W	LIP5	P32875	414 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	GIP1	P38229	639 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	SLX8	P40072	274 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	SCC4	P40090	624 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	RAD26	P40352	1085 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	YNL320W	P42840	284 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	IML2	P47031	731 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	CSN12	P47130	423 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	MNT2	P53059	558 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	TEP1	P53916	434 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	ORC3	P54790	616 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	CDC14	Q00684	551 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	YPR114W	Q06107	315 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	RMP1	Q12530	201 aa		10.82	□□□□□ -0.68
YSP3	YOR003W	CBF1	P17106	351 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	YEL043W	P32618	956 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	TFA2	P36145	328 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	YHL041W	P38730	149 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	TAH11	P47112	604 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	STR3	P53101	465 aa	Known RBP	10.81	□□□□□ -0.68
YSP3	YOR003W	RPC11	Q04307	110 aa	Predicted RBP	10.81	□□□□□ -0.68
YSP3	YOR003W	CDC73	Q06697	393 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	LDB18	Q07887	179 aa		10.81	□□□□□ -0.68
YSP3	YOR003W	APL5	Q08951	932 aa	Known RBP	10.81	□□□□□ -0.68
YSP3	YOR003W	NOP14	Q99207	810 aa	Known RBP	10.81	□□□□□ -0.68
YSP3	YOR003W	CAN1	P04817	590 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	YML002W	P0CF17	737 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	10.8	□□□□□ -0.68	not detected
YSP3	YOR003W	DCC1	P25559	380 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	GID7	P25569	745 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	UBC6	P33296	250 aa	Predicted RBP	10.8	□□□□□ -0.68
YSP3	YOR003W	PIK1	P39104	1066 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	IST3	P40565	148 aa	Predicted RBP	10.8	□□□□□ -0.68
YSP3	YOR003W	YJR124C	P47159	448 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	YPR003C	P53394	754 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	IPI3	P53877	555 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	SIW14	P53965	281 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	RPL34A	P87262	121 aa	Predicted RBP	10.8	□□□□□ -0.68
YSP3	YOR003W	RLI1	Q03195	608 aa	Known RBP	10.8	□□□□□ -0.68
YSP3	YOR003W	ATG23	Q06671	453 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	TRE2	Q08693	809 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	SFI1	Q12369	946 aa		10.8	□□□□□ -0.68
YSP3	YOR003W	CMD1	P06787	147 aa	Known RBP	10.79	□□□□□ -0.68
YSP3	YOR003W	GCR1	P07261	785 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	ERR1	P0CX10	437 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	ERR2	P0CX11	437 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	SPO16	P17122	198 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	PMA2	P19657	947 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	CLN1	P20437	546 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	MNE1	P24720	663 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	TSR4	P25040	408 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	SMF2	P38778	549 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	ERR3	P42222	437 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	COG7	P53195	279 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	MAL13	P53338	473 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	UBR1	P19812	1950 aa		10.79	□□□□□ -0.68
YSP3	YOR003W	PET111	P08468	800 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	IMA3	P0CW40	589 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	IMA4	P0CW41	589 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	CDC20	P26309	610 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	NDI1	P32340	513 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	RML2	P32611	393 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	GLG2	P47011	380 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	DAN4	P47179	1161 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	PCL10	P53124	433 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	RSC4	Q02206	625 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	HPF1	Q05164	967 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	IMA2	Q08295	589 aa		10.78	□□□□□ -0.68
YSP3	YOR003W	MPH2	P0CD99	609 aa		10.77	□□□□□ -0.68
YSP3	YOR003W	TPS2	P31688	896 aa	Known RBP	10.77	□□□□□ -0.68
YSP3	YOR003W	CNS1	P33313	385 aa		10.77	□□□□□ -0.68
YSP3	YOR003W	SCD5	P34758	872 aa		10.77	□□□□□ -0.68
YSP3	YOR003W	IRS4	P36115	615 aa	Known RBP	10.77	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms