RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ENT4Q07872 247 aa8.73□□□□□ -1.01
RPD3YNL330C MET7Q08645 548 aa8.73□□□□□ -1.01
RPD3YNL330C CHS5Q12114 671 aaKnown RBP8.73□□□□□ -1.01
RPD3YNL330C GET4Q12125 312 aa8.73□□□□□ -1.01
RPD3YNL330C LDB17Q12342 491 aa8.73□□□□□ -1.01
RPD3YNL330C ATP12P22135 325 aa8.72□□□□□ -1.01
RPD3YNL330C CYS3P31373 394 aaKnown RBP8.72□□□□□ -1.01
RPD3YNL330C BUD2P33314 1104 aa8.72□□□□□ -1.01
RPD3YNL330C HSP78P33416 811 aa8.72□□□□□ -1.01
RPD3YNL330C YAP1801P38856 637 aa8.72□□□□□ -1.01
RPD3YNL330C YHR182WP38870 785 aa8.72□□□□□ -1.01
RPD3YNL330C MEF2P39677 819 aa8.72□□□□□ -1.01
RPD3YNL330C GCN20P43535 752 aaKnown RBP8.72□□□□□ -1.01
RPD3YNL330C ASN2P49090 572 aaKnown RBP8.72□□□□□ -1.01
RPD3YNL330C YTP1P53584 459 aa8.72□□□□□ -1.01
RPD3YNL330C YPL062WQ02781 134 aa8.72□□□□□ -1.01
RPD3YNL330C INA17Q02888 182 aa8.72□□□□□ -1.01
RPD3YNL330C RLI1Q03195 608 aaKnown RBP8.72□□□□□ -1.01
RPD3YNL330C DNL4Q08387 944 aaPredicted RBP8.72□□□□□ -1.01
RPD3YNL330C MCH5Q08777 521 aa8.72□□□□□ -1.01
RPD3YNL330C HSH49Q99181 213 aaPredicted RBP8.72□□□□□ -1.01
RPD3YNL330C ENO1P00924 437 aaKnown RBP8.71□□□□□ -1.02
RPD3YNL330C SEC63P14906 663 aa8.71□□□□□ -1.02
RPD3YNL330C RGR1P19263 1082 aa8.71□□□□□ -1.02
RPD3YNL330C GCD11P32481 527 aaKnown RBP8.71□□□□□ -1.02
RPD3YNL330C BCK2P33306 851 aa8.71□□□□□ -1.02
RPD3YNL330C ECM4P36156 370 aa8.71□□□□□ -1.02
RPD3YNL330C PDX3P38075 228 aaKnown RBP8.71□□□□□ -1.02
RPD3YNL330C ARN1P38731 627 aa8.71□□□□□ -1.02
RPD3YNL330C YHI9P38765 294 aa8.71□□□□□ -1.02
RPD3YNL330C YIL089WP40500 205 aa8.71□□□□□ -1.02
RPD3YNL330C SPR3P41901 512 aa8.71□□□□□ -1.02
RPD3YNL330C MAF1P41910 395 aa8.71□□□□□ -1.02
RPD3YNL330C SET2P46995 733 aaKnown RBP8.71□□□□□ -1.02
RPD3YNL330C KTR6P54070 446 aa8.71□□□□□ -1.02
RPD3YNL330C YMR155WQ03795 547 aa8.71□□□□□ -1.02
RPD3YNL330C ARP9Q05123 467 aa8.71□□□□□ -1.02
RPD3YNL330C PUS5Q06244 254 aa8.71□□□□□ -1.02
RPD3YNL330C RCL1Q08096 367 aaPredicted RBP8.71□□□□□ -1.02
RPD3YNL330C ECM29P38737 1868 aa8.7□□□□□ -1.02
RPD3YNL330C TUB1P09733 447 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C ATR1P13090 542 aa8.7□□□□□ -1.02
RPD3YNL330C SEC15P22224 910 aa8.7□□□□□ -1.02
RPD3YNL330C DBP1P24784 617 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C AEP1P32493 518 aa8.7□□□□□ -1.02
RPD3YNL330C GDA1P32621 518 aa8.7□□□□□ -1.02
RPD3YNL330C SRP101P32916 621 aa8.7□□□□□ -1.02
RPD3YNL330C YBR053CP38235 358 aa8.7□□□□□ -1.02
RPD3YNL330C SLM4P38247 162 aa8.7□□□□□ -1.02
RPD3YNL330C SRP68P38687 599 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C FSH1P38777 243 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C GGA2P38817 585 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C ATM1P40416 690 aa8.7□□□□□ -1.02
RPD3YNL330C STB4P50104 949 aa8.7□□□□□ -1.02
RPD3YNL330C YNL134CP53912 376 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C MET14Q02196 202 aa8.7□□□□□ -1.02
RPD3YNL330C INP2Q03824 705 aa8.7□□□□□ -1.02
RPD3YNL330C NHX1Q04121 633 aa8.7□□□□□ -1.02
RPD3YNL330C HPT1Q04178 221 aaKnown RBP8.7□□□□□ -1.02
RPD3YNL330C DYN3Q04949 312 aa8.7□□□□□ -1.02
RPD3YNL330C FAR10Q06001 478 aa8.7□□□□□ -1.02
RPD3YNL330C ASA1Q06822 443 aa8.7□□□□□ -1.02
RPD3YNL330C YPR097WQ06839 1073 aa8.7□□□□□ -1.02
RPD3YNL330C NHA1Q99271 985 aa8.7□□□□□ -1.02
RPD3YNL330C COX6P00427 148 aa8.69□□□□□ -1.02
RPD3YNL330C ATP7P30902 174 aa8.69□□□□□ -1.02
RPD3YNL330C AIM26P32858 118 aa8.69□□□□□ -1.02
RPD3YNL330C ASH1P34233 588 aa8.69□□□□□ -1.02
RPD3YNL330C EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C YKR015CP36111 568 aa8.69□□□□□ -1.02
RPD3YNL330C MRPL7P36519 292 aa8.69□□□□□ -1.02
RPD3YNL330C LAM1P38851 1228 aa8.69□□□□□ -1.02
RPD3YNL330C YHB1P39676 399 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C MGS1P40151 587 aa8.69□□□□□ -1.02
RPD3YNL330C CAB2P40506 365 aa8.69□□□□□ -1.02
RPD3YNL330C SNL1P40548 159 aa8.69□□□□□ -1.02
RPD3YNL330C FMP32P43557 207 aa8.69□□□□□ -1.02
RPD3YNL330C NOP9P47077 666 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C ALT2P52892 507 aa8.69□□□□□ -1.02
RPD3YNL330C REX2P54964 269 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C ADE12P80210 433 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C TMA20P89886 181 aaPredicted RBP8.69□□□□□ -1.02
RPD3YNL330C MUK1Q02866 612 aa8.69□□□□□ -1.02
RPD3YNL330C ENT5Q03769 411 aaKnown RBP8.69□□□□□ -1.02
RPD3YNL330C CSN9Q03981 162 aa8.69□□□□□ -1.02
RPD3YNL330C GRX8Q05926 109 aa8.69□□□□□ -1.02
RPD3YNL330C SEC10Q06245 871 aa8.69□□□□□ -1.02
RPD3YNL330C SLD7Q08457 257 aa8.69□□□□□ -1.02
RPD3YNL330C DDC1Q08949 612 aa8.69□□□□□ -1.02
RPD3YNL330C ATG34Q12292 412 aa8.69□□□□□ -1.02
RPD3YNL330C STE2D6VTK4 431 aa8.68□□□□□ -1.02
RPD3YNL330C TPK1P06244 397 aa8.68□□□□□ -1.02
RPD3YNL330C NMT1P14743 455 aa8.68□□□□□ -1.02
RPD3YNL330C HSP26P15992 214 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02 RIP-Chip
RPD3YNL330C CCR4P31384 837 aaKnown RBP8.68□□□□□ -1.02
RPD3YNL330C ASK1P35734 292 aa8.68□□□□□ -1.02
RPD3YNL330C BSD2P38356 321 aa8.68□□□□□ -1.02
RPD3YNL330C RAD55P38953 406 aa8.68□□□□□ -1.02
RPD3YNL330C YEL028WP39989 153 aa8.68□□□□□ -1.02
RPD3YNL330C RSC8P43609 557 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms