RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	SAS3	P34218	831 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	SRO77	P38163	1010 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	RXT2	P38255	430 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	RGI2	P40188	164 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	LTP1	P40347	161 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	MPP10	P47083	593 aa	Known RBP	4.96	□□□□□ -1.61
BDP1	YNL039W	GLO1	P50107	326 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	INN1	P53901	409 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	CIK1	Q01649	594 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	YML119W	Q03208	357 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	YDR286C	Q05530	114 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	RGC1	Q06108	1083 aa	Known RBP	4.96	□□□□□ -1.61
BDP1	YNL039W	MCA1	Q08601	432 aa		4.96	□□□□□ -1.61
BDP1	YNL039W	ADK2	P26364	225 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	URK1	P27515	501 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	GEX2	P36173	615 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	UBP13	P38187	747 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	BUD16	P39988	312 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	AMA1	P50082	593 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	CRF1	Q04930	467 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	ACK1	Q07622	623 aa	Predicted RBP	4.96	□□□□□ -1.62
BDP1	YNL039W	PGC1	Q08959	321 aa		4.96	□□□□□ -1.62
BDP1	YNL039W	CHS5	Q12114	671 aa	Known RBP	4.96	□□□□□ -1.62
BDP1	YNL039W	CYB2	P00175	591 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	CPA2	P03965	1118 aa	Known RBP	4.95	□□□□□ -1.62
BDP1	YNL039W	CAD1	P24813	409 aa	Known RBP	4.95	□□□□□ -1.62
BDP1	YNL039W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
BDP1	YNL039W	CAP1	P28495	268 aa	Known RBP	4.95	□□□□□ -1.62
BDP1	YNL039W	PLB1	P39105	664 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	YEL057C	P39983	233 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	JHD1	P40034	492 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	ICP55	P40051	511 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	YIR042C	P40586	236 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	ERG5	P54781	538 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	ECM22	Q05958	814 aa	Predicted RBP	4.95	□□□□□ -1.62
BDP1	YNL039W	SWT1	Q12104	458 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	YPR053C	Q6Q5F3	151 aa		4.95	□□□□□ -1.62
BDP1	YNL039W	NTH1	P32356	751 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	MSS1	P32559	526 aa	Predicted RBP	4.94	□□□□□ -1.62
BDP1	YNL039W	REG2	P38232	338 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	SMF1	P38925	575 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	YJL206C	P39529	758 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	MET18	P40469	1032 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	ROK1	P45818	564 aa	Predicted RBP	4.94	□□□□□ -1.62
BDP1	YNL039W	SGF73	P53165	657 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	JJJ1	P53863	590 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	GCN5	Q03330	439 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	YOL159C-A	Q3E769	90 aa		4.94	□□□□□ -1.62
BDP1	YNL039W	MNE1	P24720	663 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	STE50	P25344	346 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	POL4	P25615	582 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	CDC20	P26309	610 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	GPI10	P30777	616 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	MVD1	P32377	396 aa	Known RBP	4.93	□□□□□ -1.62
BDP1	YNL039W	MDL1	P33310	695 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	GCS1	P35197	352 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	UBP11	P36026	717 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	AUR1	P36107	401 aa	Predicted RBP	4.93	□□□□□ -1.62
BDP1	YNL039W	SKN7	P38889	622 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	YIL166C	P40445	542 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	YLR224W	Q05947	369 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	SKG3	Q06315	1026 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	ATG23	Q06671	453 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	FRE5	Q08908	694 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	TCO89	Q08921	799 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	YJR112W-A	Q3E743	109 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	CET1	O13297	549 aa	Predicted RBP	4.93	□□□□□ -1.62
BDP1	YNL039W	CLB3	P24870	427 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	LRE1	P25579	583 aa	Known RBP	4.93	□□□□□ -1.62
BDP1	YNL039W	MAL33	P38157	468 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	MET28	P40573	187 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	IME4	P41833	600 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	OGG1	P53397	376 aa	Predicted RBP	4.93	□□□□□ -1.62
BDP1	YNL039W	YEH1	Q07804	573 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	RIM20	Q12033	661 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	YOR019W	Q99248	730 aa		4.93	□□□□□ -1.62
BDP1	YNL039W	TRP3	P00937	484 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
BDP1	YNL039W	AAD3	P25612	363 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	KES1	P35844	434 aa	Known RBP	4.92	□□□□□ -1.62
BDP1	YNL039W	STB6	P36085	766 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	MRPL7	P36519	292 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	PES4	P39684	611 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	SSU1	P41930	458 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	MPS3	P47069	682 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	YGR066C	P53242	292 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	ERB1	Q04660	807 aa	Known RBP	4.92	□□□□□ -1.62
BDP1	YNL039W	GTB1	Q04924	702 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	IZH3	Q07959	543 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	SPE4	Q12455	300 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	PAR32	Q12515	295 aa	Known RBP	4.92	□□□□□ -1.62
BDP1	YNL039W	YBR255C-A	Q3E776	120 aa		4.92	□□□□□ -1.62
BDP1	YNL039W	SRB5	P32585	307 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	SDH8	P38345	138 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	RFC1	P38630	861 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	MUP1	P50276	574 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	EFR3	Q03653	782 aa	Known RBP	4.91	□□□□□ -1.62
BDP1	YNL039W	YDR132C	Q03900	495 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	AIM32	Q04689	311 aa		4.91	□□□□□ -1.62
BDP1	YNL039W	ENB1	Q08299	606 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms