RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C YIR016WP40572 265 aa3.43□□□□□ -1.86
UBX4YMR067C YJL107CP42947 387 aa3.43□□□□□ -1.86
UBX4YMR067C ASK10P48361 1146 aa3.43□□□□□ -1.86
UBX4YMR067C LYS20P48570 428 aaKnown RBP3.43□□□□□ -1.86
UBX4YMR067C YRB30P53107 440 aaPredicted RBP3.43□□□□□ -1.86
UBX4YMR067C ESF2P53743 316 aaKnown RBP3.43□□□□□ -1.86
UBX4YMR067C BOP3P53958 396 aa3.43□□□□□ -1.86
UBX4YMR067C YNL034WP53963 612 aa3.43□□□□□ -1.86
UBX4YMR067C NEW1Q08972 1196 aaKnown RBP3.43□□□□□ -1.86
UBX4YMR067C UBX3Q12229 455 aa3.43□□□□□ -1.86
UBX4YMR067C GAL4P04386 881 aa3.42□□□□□ -1.86
UBX4YMR067C SSB1P11484 613 aaKnown RBP3.42□□□□□ -1.86
UBX4YMR067C PTC6P25646 442 aa3.42□□□□□ -1.86
UBX4YMR067C ARN1P38731 627 aa3.42□□□□□ -1.86
UBX4YMR067C TPA1P40032 644 aaKnown RBP3.42□□□□□ -1.86
UBX4YMR067C SSB2P40150 613 aaKnown RBP3.42□□□□□ -1.86
UBX4YMR067C YIL152WP40455 235 aa3.42□□□□□ -1.86
UBX4YMR067C DSE3Q08729 430 aa3.42□□□□□ -1.86
UBX4YMR067C LEA1Q08963 238 aaPredicted RBP3.42□□□□□ -1.86
UBX4YMR067C PFA4Q12006 378 aa3.42□□□□□ -1.86
UBX4YMR067C RRI1Q12468 440 aa3.42□□□□□ -1.86
UBX4YMR067C MSS51P32335 436 aa3.41□□□□□ -1.86
UBX4YMR067C RGT1P32862 1170 aa3.41□□□□□ -1.86
UBX4YMR067C SCO2P38072 301 aa3.41□□□□□ -1.86
UBX4YMR067C ACS1Q01574 713 aa3.41□□□□□ -1.86
UBX4YMR067C YPL108WQ02872 168 aaPredicted RBP3.41□□□□□ -1.86
UBX4YMR067C THI3Q07471 609 aa3.41□□□□□ -1.86
UBX4YMR067C SNA4Q07549 140 aa3.41□□□□□ -1.86
UBX4YMR067C SEC18P18759 758 aaKnown RBP3.4□□□□□ -1.87
UBX4YMR067C LAC1P28496 418 aa3.4□□□□□ -1.87
UBX4YMR067C FRD1P32614 470 aaKnown RBP3.4□□□□□ -1.87
UBX4YMR067C UBP7P40453 1071 aa3.4□□□□□ -1.87
UBX4YMR067C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
UBX4YMR067C HES1P35843 434 aa3.39□□□□□ -1.87
UBX4YMR067C GND1P38720 489 aaKnown RBP3.39□□□□□ -1.87
UBX4YMR067C FUN12P39730 1002 aaKnown RBP3.39□□□□□ -1.87
UBX4YMR067C YAT2P40017 923 aa3.39□□□□□ -1.87
UBX4YMR067C PHM8P40025 321 aa3.39□□□□□ -1.87
UBX4YMR067C NPA3P47122 385 aa3.39□□□□□ -1.87
UBX4YMR067C YPT11P48559 417 aa3.39□□□□□ -1.87
UBX4YMR067C FOL1P53848 824 aa3.39□□□□□ -1.87
UBX4YMR067C YNL144CP53907 740 aa3.39□□□□□ -1.87
UBX4YMR067C GTB1Q04924 702 aa3.39□□□□□ -1.87
UBX4YMR067C GRS2Q06817 618 aa3.39□□□□□ -1.87
UBX4YMR067C MLH2Q07980 695 aa3.39□□□□□ -1.87
UBX4YMR067C YOR111WQ99210 232 aa3.39□□□□□ -1.87
UBX4YMR067C GCS1P35197 352 aa3.38□□□□□ -1.87
UBX4YMR067C OCT1P35999 772 aa3.38□□□□□ -1.87
UBX4YMR067C STT3P39007 718 aaKnown RBP3.38□□□□□ -1.87
UBX4YMR067C CDC1P40986 491 aa3.38□□□□□ -1.87
UBX4YMR067C CEG1Q01159 459 aaPredicted RBP3.38□□□□□ -1.87
UBX4YMR067C YLR281CQ05863 155 aa3.38□□□□□ -1.87
UBX4YMR067C GSH2Q08220 491 aa3.38□□□□□ -1.87
UBX4YMR067C SIR1P21691 654 aa3.37□□□□□ -1.87
UBX4YMR067C NIC96P34077 839 aa3.37□□□□□ -1.87
UBX4YMR067C CAB2P40506 365 aa3.37□□□□□ -1.87
UBX4YMR067C UBX6P47049 396 aa3.37□□□□□ -1.87
UBX4YMR067C YGR079WP53249 370 aa3.37□□□□□ -1.87
UBX4YMR067C EAF7P53911 425 aaKnown RBP3.37□□□□□ -1.87
UBX4YMR067C EIS1Q05050 843 aaKnown RBP3.37□□□□□ -1.87
UBX4YMR067C ECM22Q05958 814 aaPredicted RBP3.37□□□□□ -1.87
UBX4YMR067C PIG1Q06216 648 aa3.37□□□□□ -1.87
UBX4YMR067C MCM3P24279 971 aaKnown RBP3.36□□□□□ -1.87
UBX4YMR067C ARC40P38328 384 aaKnown RBP3.36□□□□□ -1.87
UBX4YMR067C PCL6P40038 420 aa3.36□□□□□ -1.87
UBX4YMR067C UBP8P50102 471 aa3.36□□□□□ -1.87
UBX4YMR067C PDR8Q06149 701 aa3.36□□□□□ -1.87
UBX4YMR067C MCH4Q08268 501 aa3.36□□□□□ -1.87
UBX4YMR067C BAG7Q12128 409 aa3.36□□□□□ -1.87
UBX4YMR067C RVB2Q12464 471 aaKnown RBP3.36□□□□□ -1.87
UBX4YMR067C COX1P00401 534 aa3.35□□□□□ -1.87
UBX4YMR067C BIK1P11709 440 aa3.35□□□□□ -1.87
UBX4YMR067C RKM3P38222 552 aa3.35□□□□□ -1.87
UBX4YMR067C TES1P41903 349 aaKnown RBP3.35□□□□□ -1.87
UBX4YMR067C MAD3P47074 515 aa3.35□□□□□ -1.87
UBX4YMR067C VPS25P47142 202 aa3.35□□□□□ -1.87
UBX4YMR067C IMA1P53051 589 aa3.35□□□□□ -1.87
UBX4YMR067C ATG21Q02887 496 aa3.35□□□□□ -1.87
UBX4YMR067C CAC2Q04199 468 aa3.35□□□□□ -1.87
UBX4YMR067C SWF1Q04629 336 aa3.35□□□□□ -1.87
UBX4YMR067C ATG23Q06671 453 aa3.35□□□□□ -1.87
UBX4YMR067C SST2P11972 698 aaKnown RBP3.34□□□□□ -1.87
UBX4YMR067C YCR043CP25361 127 aa3.34□□□□□ -1.87
UBX4YMR067C VPS41P38959 992 aa3.34□□□□□ -1.87
UBX4YMR067C CCT4P39078 528 aaKnown RBP3.34□□□□□ -1.87
UBX4YMR067C DJP1P40564 432 aa3.34□□□□□ -1.87
UBX4YMR067C MAF1P41910 395 aa3.34□□□□□ -1.87
UBX4YMR067C YPR003CP53394 754 aa3.34□□□□□ -1.87
UBX4YMR067C TGL2P54857 326 aa3.34□□□□□ -1.87
UBX4YMR067C YMR034CQ05131 434 aaPredicted RBP3.34□□□□□ -1.87
UBX4YMR067C IWR1Q07532 353 aaPredicted RBP3.34□□□□□ -1.87
UBX4YMR067C NDD1Q08887 554 aa3.34□□□□□ -1.87
UBX4YMR067C ICL2Q12031 575 aa3.34□□□□□ -1.87
UBX4YMR067C YOL114CQ12322 202 aa3.34□□□□□ -1.87
UBX4YMR067C TMA7Q3E764 64 aaKnown RBP3.34□□□□□ -1.87
UBX4YMR067C YFL068WP0CX99 160 aa3.33□□□□□ -1.88
UBX4YMR067C YLL066W-AP0CY00 160 aa3.33□□□□□ -1.88
UBX4YMR067C YLL067W-AP0CY01 160 aa3.33□□□□□ -1.88
UBX4YMR067C PET122P10355 254 aa3.33□□□□□ -1.88
UBX4YMR067C MRP2P10663 115 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms