RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W VFA1P40080 203 aa5.29□□□□□ -1.56
NDC1YML031W YIL108WP40483 696 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W DLD2P46681 530 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W YJL132WP47014 750 aa5.29□□□□□ -1.56
NDC1YML031W YJR124CP47159 448 aa5.29□□□□□ -1.56
NDC1YML031W CDC55Q00362 526 aa5.29□□□□□ -1.56
NDC1YML031W BNA5Q05979 453 aa5.29□□□□□ -1.56
NDC1YML031W RUD3Q12234 484 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W GPM3Q12326 303 aa5.29□□□□□ -1.56
NDC1YML031W AFI1Q99222 893 aa5.29□□□□□ -1.56
NDC1YML031W SBP1P10080 294 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W TRX1P22217 103 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W RAD57P25301 460 aa5.29□□□□□ -1.56
NDC1YML031W BYE1P36106 594 aa5.29□□□□□ -1.56
NDC1YML031W UBP14P38237 781 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W ERP2P39704 215 aa5.29□□□□□ -1.56
NDC1YML031W PAN6P40459 309 aa5.29□□□□□ -1.56
NDC1YML031W MNN11P46985 422 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W CIS3P47001 227 aa5.29□□□□□ -1.56
NDC1YML031W MTO1P53070 669 aa5.29□□□□□ -1.56
NDC1YML031W YNL247WP53852 767 aaKnown RBP5.29□□□□□ -1.56
NDC1YML031W IPI3P53877 555 aa5.29□□□□□ -1.56
NDC1YML031W UME1Q03010 460 aa5.29□□□□□ -1.56
NDC1YML031W PPN1Q04119 674 aa5.29□□□□□ -1.56
NDC1YML031W YLR287CQ05881 355 aa5.29□□□□□ -1.56
NDC1YML031W ATG10Q07879 167 aa5.29□□□□□ -1.56
NDC1YML031W TRE2Q08693 809 aa5.29□□□□□ -1.56
NDC1YML031W RMP1Q12530 201 aa5.29□□□□□ -1.56
NDC1YML031W YIL046W-AQ3E7Z4 54 aa5.29□□□□□ -1.56
NDC1YML031W RAD1P06777 1100 aa5.28□□□□□ -1.56
NDC1YML031W LEU1P07264 779 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W PAP1P29468 568 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W CNS1P33313 385 aa5.28□□□□□ -1.56
NDC1YML031W YHL041WP38730 149 aa5.28□□□□□ -1.56
NDC1YML031W SMC2P38989 1170 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W RPS10BP46784 105 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W NBP35P52920 328 aa5.28□□□□□ -1.56
NDC1YML031W RPL34AP87262 121 aaPredicted RBP5.28□□□□□ -1.56
NDC1YML031W NGL3Q03210 505 aa5.28□□□□□ -1.56
NDC1YML031W UTP5Q04177 643 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W SWC7Q06707 132 aa5.28□□□□□ -1.56
NDC1YML031W NOP6Q07623 225 aaKnown RBP5.28□□□□□ -1.56
NDC1YML031W RPS10AQ08745 105 aaPredicted RBP5.28□□□□□ -1.56
NDC1YML031W NUR1Q12066 484 aa5.28□□□□□ -1.56
NDC1YML031W IZH4Q99393 312 aa5.28□□□□□ -1.56
NDC1YML031W GFA1P14742 717 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W STE4P18851 423 aa5.27□□□□□ -1.57
NDC1YML031W PMA2P19657 947 aa5.27□□□□□ -1.57
NDC1YML031W PAT1P25644 796 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W NFU1P32860 256 aa5.27□□□□□ -1.57
NDC1YML031W TRF5P48561 642 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W SPC105P53148 917 aa5.27□□□□□ -1.57
NDC1YML031W YNL040WP53960 456 aaPredicted RBP5.27□□□□□ -1.57
NDC1YML031W YDR131CQ03899 556 aa5.27□□□□□ -1.57
NDC1YML031W YLR001CQ07895 862 aa5.27□□□□□ -1.57
NDC1YML031W NEW1Q08972 1196 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W TFB4Q12004 338 aa5.27□□□□□ -1.57
NDC1YML031W EFG1Q3E705 233 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W YKR104WP0CE69 306 aa5.27□□□□□ -1.57
NDC1YML031W SCH9P11792 824 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W AAT2P23542 418 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W SRB4P32569 687 aa5.27□□□□□ -1.57
NDC1YML031W MEC1P38111 2368 aa5.27□□□□□ -1.57
NDC1YML031W NCL1P38205 684 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W BIT2P38346 545 aa5.27□□□□□ -1.57
NDC1YML031W PPE1P38796 400 aa5.27□□□□□ -1.57
NDC1YML031W ELO1P39540 310 aa5.27□□□□□ -1.57
NDC1YML031W RRT5P43607 289 aa5.27□□□□□ -1.57
NDC1YML031W NRD1P53617 575 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
NDC1YML031W TPO1Q07824 586 aa5.27□□□□□ -1.57
NDC1YML031W CMS1Q07897 291 aaKnown RBP5.27□□□□□ -1.57
NDC1YML031W SEY1Q99287 776 aa5.27□□□□□ -1.57
NDC1YML031W PDR1P12383 1068 aa5.26□□□□□ -1.57
NDC1YML031W TRM1P15565 570 aaKnown RBP5.26□□□□□ -1.57
NDC1YML031W PRP9P19736 530 aaKnown RBP5.26□□□□□ -1.57
NDC1YML031W CKI1P20485 582 aa5.26□□□□□ -1.57
NDC1YML031W SNT1P25357 1226 aa5.26□□□□□ -1.57
NDC1YML031W RIM101P33400 625 aa5.26□□□□□ -1.57
NDC1YML031W ALY1P36117 915 aa5.26□□□□□ -1.57
NDC1YML031W SIC1P38634 284 aa5.26□□□□□ -1.57
NDC1YML031W LRP1P38801 184 aaKnown RBP5.26□□□□□ -1.57
NDC1YML031W KHA1P40309 873 aa5.26□□□□□ -1.57
NDC1YML031W VPS9P54787 451 aa5.26□□□□□ -1.57
NDC1YML031W SYH1Q02875 849 aaKnown RBP5.26□□□□□ -1.57
NDC1YML031W SOV1Q04748 898 aa5.26□□□□□ -1.57
NDC1YML031W PGC1Q08959 321 aa5.26□□□□□ -1.57
NDC1YML031W YOR338WQ99326 363 aa5.26□□□□□ -1.57
NDC1YML031W CDC8P00572 216 aa5.25□□□□□ -1.57
NDC1YML031W INH1P01097 85 aa5.25□□□□□ -1.57
NDC1YML031W RIP1P08067 215 aa5.25□□□□□ -1.57
NDC1YML031W DAL82P21705 255 aa5.25□□□□□ -1.57
NDC1YML031W MSR1P38714 643 aa5.25□□□□□ -1.57
NDC1YML031W AIM18P38884 321 aa5.25□□□□□ -1.57
NDC1YML031W SIP4P46954 829 aa5.25□□□□□ -1.57
NDC1YML031W SET2P46995 733 aaKnown RBP5.25□□□□□ -1.57
NDC1YML031W CWC22P53333 577 aaKnown RBP5.25□□□□□ -1.57
NDC1YML031W CSL4P53859 292 aaPredicted RBP5.25□□□□□ -1.57
NDC1YML031W VAC7P53950 1165 aa5.25□□□□□ -1.57
NDC1YML031W IVY1Q04934 453 aa5.25□□□□□ -1.57
NDC1YML031W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms