RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W SGV1P23293 657 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W RSC6P25632 483 aa7.48□□□□□ -1.21
CTF3YLR381W ANP1P32629 500 aa7.48□□□□□ -1.21
CTF3YLR381W HBS1P32769 611 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W YPT52P36018 234 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W PDX3P38075 228 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W CDS1P38221 457 aa7.48□□□□□ -1.21
CTF3YLR381W HPM1P40481 377 aa7.48□□□□□ -1.21
CTF3YLR381W QRI1P43123 477 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W MAD3P47074 515 aa7.48□□□□□ -1.21
CTF3YLR381W LSC2P53312 427 aa7.48□□□□□ -1.21
CTF3YLR381W YDR476CQ03362 224 aa7.48□□□□□ -1.21
CTF3YLR381W YLR352WQ06479 807 aa7.48□□□□□ -1.21
CTF3YLR381W SSP2Q08646 371 aa7.48□□□□□ -1.21
CTF3YLR381W FEX2Q08991 375 aa7.48□□□□□ -1.21
CTF3YLR381W HMS1Q12398 434 aa7.48□□□□□ -1.21
CTF3YLR381W DPH6Q12429 685 aa7.48□□□□□ -1.21
CTF3YLR381W GAL1P04385 528 aa7.48□□□□□ -1.21
CTF3YLR381W MRP7P12687 371 aa7.48□□□□□ -1.21
CTF3YLR381W PRI2P20457 528 aa7.48□□□□□ -1.21
CTF3YLR381W RTG2P32608 588 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W MCD4P36051 919 aa7.48□□□□□ -1.21
CTF3YLR381W CUE2P36075 443 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W ALG14P38242 237 aa7.48□□□□□ -1.21
CTF3YLR381W YBR285WP38354 144 aa7.48□□□□□ -1.21
CTF3YLR381W SPC97P38863 823 aa7.48□□□□□ -1.21
CTF3YLR381W CEM1P39525 442 aa7.48□□□□□ -1.21
CTF3YLR381W GTT1P40582 234 aa7.48□□□□□ -1.21
CTF3YLR381W PIB2P53191 635 aa7.48□□□□□ -1.21
CTF3YLR381W YMR279CQ03263 540 aa7.48□□□□□ -1.21
CTF3YLR381W YDR249CQ03787 373 aa7.48□□□□□ -1.21
CTF3YLR381W UBX5Q06682 500 aa7.48□□□□□ -1.21
CTF3YLR381W COS7Q07788 383 aa7.48□□□□□ -1.21
CTF3YLR381W WRS1Q12109 432 aaKnown RBP7.48□□□□□ -1.21
CTF3YLR381W RRI2Q12348 645 aa7.48□□□□□ -1.21
CTF3YLR381W AVL9Q12500 764 aa7.48□□□□□ -1.21
CTF3YLR381W CBP6P07253 162 aaPredicted RBP7.47□□□□□ -1.21
CTF3YLR381W HEM3P28789 327 aa7.47□□□□□ -1.21
CTF3YLR381W CCR4P31384 837 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W DBF20P32328 564 aa7.47□□□□□ -1.21
CTF3YLR381W DGR2P32330 852 aa7.47□□□□□ -1.21
CTF3YLR381W KRE6P32486 720 aa7.47□□□□□ -1.21
CTF3YLR381W VAM7P32912 316 aa7.47□□□□□ -1.21
CTF3YLR381W BSD2P38356 321 aa7.47□□□□□ -1.21
CTF3YLR381W YHR202WP38887 602 aa7.47□□□□□ -1.21
CTF3YLR381W STL1P39932 569 aa7.47□□□□□ -1.21
CTF3YLR381W YFL034WP43564 1073 aa7.47□□□□□ -1.21
CTF3YLR381W ZDS2P54786 942 aa7.47□□□□□ -1.21
CTF3YLR381W DIG1Q03063 452 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W GAL83Q04739 417 aa7.47□□□□□ -1.21
CTF3YLR381W ARP7Q12406 477 aa7.47□□□□□ -1.21
CTF3YLR381W APC1P53886 1748 aa7.47□□□□□ -1.21
CTF3YLR381W PDC5P16467 563 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W YSP3P25036 478 aa7.47□□□□□ -1.21
CTF3YLR381W ATG22P25568 528 aa7.47□□□□□ -1.21
CTF3YLR381W ECM2P38241 364 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W YHR219WP38900 624 aa7.47□□□□□ -1.21
CTF3YLR381W SSO2P39926 295 aa7.47□□□□□ -1.21
CTF3YLR381W UBP7P40453 1071 aa7.47□□□□□ -1.21
CTF3YLR381W SEC28P40509 296 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W GUS1P46655 708 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
CTF3YLR381W ARO8P53090 500 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W TWF1P53250 332 aa7.47□□□□□ -1.21
CTF3YLR381W RPL22BP56628 122 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W UTP6Q02354 440 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W YMR187CQ03236 431 aa7.47□□□□□ -1.21
CTF3YLR381W YMR226CQ05016 267 aaKnown RBP7.47□□□□□ -1.21
CTF3YLR381W NDE2Q07500 545 aa7.47□□□□□ -1.21
CTF3YLR381W NTG2Q08214 380 aa7.47□□□□□ -1.21
CTF3YLR381W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
CTF3YLR381W NFT1P0CE68 1218 aa7.46□□□□□ -1.22
CTF3YLR381W RPS7AP26786 190 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W KTR3P38130 404 aaPredicted RBP7.46□□□□□ -1.22
CTF3YLR381W RIM4P38741 713 aa7.46□□□□□ -1.22
CTF3YLR381W SMF2P38778 549 aa7.46□□□□□ -1.22
CTF3YLR381W PRK1P40494 810 aa7.46□□□□□ -1.22
CTF3YLR381W UTP25P40498 721 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W MSS2P40990 351 aa7.46□□□□□ -1.22
CTF3YLR381W RIM8P53179 542 aa7.46□□□□□ -1.22
CTF3YLR381W YNL193WP53870 558 aa7.46□□□□□ -1.22
CTF3YLR381W DAK1P54838 584 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W MRPL13Q02204 264 aa7.46□□□□□ -1.22
CTF3YLR381W TIF35Q04067 274 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W YPR202WQ08993 238 aa7.46□□□□□ -1.22
CTF3YLR381W LAG2Q92325 660 aa7.46□□□□□ -1.22
CTF3YLR381W AEP2P22136 580 aa7.46□□□□□ -1.22
CTF3YLR381W RIT1P23796 513 aa7.46□□□□□ -1.22
CTF3YLR381W DBP2P24783 546 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W RRT12P25381 491 aa7.46□□□□□ -1.22
CTF3YLR381W SEC61P32915 480 aa7.46□□□□□ -1.22
CTF3YLR381W PRP40P33203 583 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W TRM2P33753 639 aa7.46□□□□□ -1.22
CTF3YLR381W RPC25P35718 212 aa7.46□□□□□ -1.22
CTF3YLR381W YHR045WP38775 560 aa7.46□□□□□ -1.22
CTF3YLR381W LNP1P38878 278 aa7.46□□□□□ -1.22
CTF3YLR381W BIM1P40013 344 aa7.46□□□□□ -1.22
CTF3YLR381W SOK1P40317 901 aa7.46□□□□□ -1.22
CTF3YLR381W NIT3P49954 291 aa7.46□□□□□ -1.22
CTF3YLR381W PRP24P49960 444 aaKnown RBP7.46□□□□□ -1.22
CTF3YLR381W MCH5Q08777 521 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms