RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C RSC2Q06488 889 aa9.31□□□□□ -0.92
SEC61YLR378C SLP1Q12232 587 aa9.31□□□□□ -0.92
SEC61YLR378C RGS2Q99188 309 aa9.31□□□□□ -0.92
SEC61YLR378C SRP101P32916 621 aa9.3□□□□□ -0.92
SEC61YLR378C TGL4P36165 910 aa9.3□□□□□ -0.92
SEC61YLR378C ATG12P38316 186 aa9.3□□□□□ -0.92
SEC61YLR378C SFB3P38810 929 aa9.3□□□□□ -0.92
SEC61YLR378C YJL107CP42947 387 aa9.3□□□□□ -0.92
SEC61YLR378C RCF2P53721 224 aa9.3□□□□□ -0.92
SEC61YLR378C NOP15P53927 220 aaPredicted RBP9.3□□□□□ -0.92
SEC61YLR378C EFM6P53970 246 aa9.3□□□□□ -0.92
SEC61YLR378C NHX1Q04121 633 aa9.3□□□□□ -0.92
SEC61YLR378C ADY3Q07732 790 aa9.3□□□□□ -0.92
SEC61YLR378C YPQ1Q12010 308 aa9.3□□□□□ -0.92
SEC61YLR378C BAS1P22035 811 aa9.29□□□□□ -0.92
SEC61YLR378C ATP12P22135 325 aa9.29□□□□□ -0.92
SEC61YLR378C MET22P32179 357 aa9.29□□□□□ -0.92
SEC61YLR378C CYM1P32898 989 aa9.29□□□□□ -0.92
SEC61YLR378C MRPL40P36534 297 aa9.29□□□□□ -0.92
SEC61YLR378C COQ6P53318 479 aa9.29□□□□□ -0.92
SEC61YLR378C YNL058CP53947 316 aa9.29□□□□□ -0.92
SEC61YLR378C YLR177WQ06251 628 aa9.29□□□□□ -0.92
SEC61YLR378C YPL225WQ08971 146 aaKnown RBP9.29□□□□□ -0.92
SEC61YLR378C YOL087CQ99247 1116 aa9.29□□□□□ -0.92
SEC61YLR378C INO1P11986 533 aa9.28□□□□□ -0.92
SEC61YLR378C HMG2P12684 1045 aa9.28□□□□□ -0.92
SEC61YLR378C PRP4P20053 465 aaKnown RBP9.28□□□□□ -0.92
SEC61YLR378C MSH2P25847 964 aa9.28□□□□□ -0.92
SEC61YLR378C PHA2P32452 334 aa9.28□□□□□ -0.92
SEC61YLR378C MRP21P38175 177 aa9.28□□□□□ -0.92
SEC61YLR378C YIL161WP40449 235 aaKnown RBP9.28□□□□□ -0.92
SEC61YLR378C SEC28P40509 296 aaKnown RBP9.28□□□□□ -0.92
SEC61YLR378C IST3P40565 148 aaPredicted RBP9.28□□□□□ -0.92
SEC61YLR378C ASN2P49090 572 aaKnown RBP9.28□□□□□ -0.92
SEC61YLR378C TIM13P53299 105 aa9.28□□□□□ -0.92
SEC61YLR378C SPC24Q04477 213 aa9.28□□□□□ -0.92
SEC61YLR378C OCA6Q12454 224 aa9.28□□□□□ -0.92
SEC61YLR378C YPT6Q99260 215 aa9.28□□□□□ -0.92
SEC61YLR378C YMR085WP0CF18 432 aa9.27□□□□□ -0.93
SEC61YLR378C RNA1P11745 407 aaKnown RBP9.27□□□□□ -0.93
SEC61YLR378C GCY1P14065 312 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
SEC61YLR378C AMD2P22580 549 aa9.27□□□□□ -0.93
SEC61YLR378C PEX1P24004 1043 aa9.27□□□□□ -0.93
SEC61YLR378C URK1P27515 501 aa9.27□□□□□ -0.93
SEC61YLR378C MCM5P29496 775 aaKnown RBP9.27□□□□□ -0.93
SEC61YLR378C TOA1P32773 286 aa9.27□□□□□ -0.93
SEC61YLR378C MAK5P38112 773 aaPredicted RBP9.27□□□□□ -0.93
SEC61YLR378C MEF2P39677 819 aa9.27□□□□□ -0.93
SEC61YLR378C ARC1P46672 376 aaKnown RBP9.27□□□□□ -0.93
SEC61YLR378C CCT8P47079 568 aaKnown RBP9.27□□□□□ -0.93
SEC61YLR378C YNR063WP53749 607 aa9.27□□□□□ -0.93
SEC61YLR378C IST1P53843 298 aaPredicted RBP9.27□□□□□ -0.93
SEC61YLR378C TRS31Q03337 283 aa9.27□□□□□ -0.93
SEC61YLR378C YDR109CQ04585 715 aa9.27□□□□□ -0.93
SEC61YLR378C RTN1Q04947 295 aaKnown RBP9.27□□□□□ -0.93
SEC61YLR378C YCS4Q06156 1176 aa9.27□□□□□ -0.93
SEC61YLR378C BSP1Q06604 576 aa9.27□□□□□ -0.93
SEC61YLR378C BUD20Q08004 166 aaPredicted RBP9.27□□□□□ -0.93
SEC61YLR378C PEX15Q08215 383 aa9.27□□□□□ -0.93
SEC61YLR378C SLD7Q08457 257 aa9.27□□□□□ -0.93
SEC61YLR378C ERG20P08524 352 aaKnown RBP9.26□□□□□ -0.93
SEC61YLR378C ARG1P22768 420 aa9.26□□□□□ -0.93
SEC61YLR378C MIH1P23748 554 aa9.26□□□□□ -0.93
SEC61YLR378C SEC14P24280 304 aaKnown RBP9.26□□□□□ -0.93
SEC61YLR378C GCD11P32481 527 aaKnown RBP9.26□□□□□ -0.93
SEC61YLR378C KAR9P32526 644 aa9.26□□□□□ -0.93
SEC61YLR378C GDA1P32621 518 aa9.26□□□□□ -0.93
SEC61YLR378C BEM3P32873 1128 aa9.26□□□□□ -0.93
SEC61YLR378C TFA2P36145 328 aa9.26□□□□□ -0.93
SEC61YLR378C YHI9P38765 294 aa9.26□□□□□ -0.93
SEC61YLR378C RGI2P40188 164 aa9.26□□□□□ -0.93
SEC61YLR378C UBP7P40453 1071 aa9.26□□□□□ -0.93
SEC61YLR378C HOS4P40480 1083 aa9.26□□□□□ -0.93
SEC61YLR378C ARH1P48360 493 aa9.26□□□□□ -0.93
SEC61YLR378C TEL2P53038 688 aa9.26□□□□□ -0.93
SEC61YLR378C STR3P53101 465 aaKnown RBP9.26□□□□□ -0.93
SEC61YLR378C PEX8P53248 589 aa9.26□□□□□ -0.93
SEC61YLR378C GND2P53319 492 aa9.26□□□□□ -0.93
SEC61YLR378C GTR1Q00582 310 aa9.26□□□□□ -0.93
SEC61YLR378C TOF2Q02208 771 aa9.26□□□□□ -0.93
SEC61YLR378C EAR1Q03212 550 aa9.26□□□□□ -0.93
SEC61YLR378C YMR209CQ03648 457 aa9.26□□□□□ -0.93
SEC61YLR378C RPN9Q04062 393 aaKnown RBP9.26□□□□□ -0.93
SEC61YLR378C YDR338CQ05497 695 aa9.26□□□□□ -0.93
SEC61YLR378C YEL077CQ3E7X8 1277 aa9.26□□□□□ -0.93
SEC61YLR378C PMR1P13586 950 aa9.25□□□□□ -0.93
SEC61YLR378C ACO1P19414 778 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
SEC61YLR378C SYN8P31377 255 aa9.25□□□□□ -0.93
SEC61YLR378C RIM2P38127 377 aa9.25□□□□□ -0.93
SEC61YLR378C PHO89P38361 574 aa9.25□□□□□ -0.93
SEC61YLR378C KTR7P40504 517 aa9.25□□□□□ -0.93
SEC61YLR378C YTP1P53584 459 aa9.25□□□□□ -0.93
SEC61YLR378C REG1Q00816 1014 aa9.25□□□□□ -0.93
SEC61YLR378C NUP100Q02629 959 aa9.25□□□□□ -0.93
SEC61YLR378C PET117Q02771 107 aa9.25□□□□□ -0.93
SEC61YLR378C RPN4Q03465 531 aa9.25□□□□□ -0.93
SEC61YLR378C YOR387CQ08910 206 aa9.25□□□□□ -0.93
SEC61YLR378C AHC1Q12433 566 aa9.25□□□□□ -0.93
SEC61YLR378C HSP26P15992 214 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
SEC61YLR378C CLN1P20437 546 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms