RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C MAD3P47074 515 aa3.9□□□□□ -1.79
ATG38YLR211C YPR003CP53394 754 aa3.9□□□□□ -1.79
ATG38YLR211C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
ATG38YLR211C ARP7Q12406 477 aa3.9□□□□□ -1.79
ATG38YLR211C YBR255C-AQ3E776 120 aa3.9□□□□□ -1.79
ATG38YLR211C SSB1P11484 613 aaKnown RBP3.89□□□□□ -1.79
ATG38YLR211C PTC6P25646 442 aa3.89□□□□□ -1.79
ATG38YLR211C ATO2P32907 282 aa3.89□□□□□ -1.79
ATG38YLR211C SSB2P40150 613 aaKnown RBP3.89□□□□□ -1.79
ATG38YLR211C MDV1P47025 714 aa3.89□□□□□ -1.79
ATG38YLR211C LSC1P53598 329 aaKnown RBP3.89□□□□□ -1.79
ATG38YLR211C ATX2Q12067 313 aa3.89□□□□□ -1.79
ATG38YLR211C CNA1P23287 553 aa3.88□□□□□ -1.79
ATG38YLR211C RPF2P36160 344 aaKnown RBP3.88□□□□□ -1.79
ATG38YLR211C STT3P39007 718 aaKnown RBP3.88□□□□□ -1.79
ATG38YLR211C SNA4Q07549 140 aa3.88□□□□□ -1.79
ATG38YLR211C SRL1Q08673 210 aa3.88□□□□□ -1.79
ATG38YLR211C LEA1Q08963 238 aaPredicted RBP3.88□□□□□ -1.79
ATG38YLR211C MPD2Q99316 277 aa3.88□□□□□ -1.79
ATG38YLR211C COX1P00401 534 aa3.87□□□□□ -1.79
ATG38YLR211C ILV2P07342 687 aaKnown RBP3.87□□□□□ -1.79
ATG38YLR211C TOM71P38825 639 aaKnown RBP3.87□□□□□ -1.79
ATG38YLR211C ORC5P50874 479 aa3.87□□□□□ -1.79
ATG38YLR211C AAT1Q01802 451 aa3.87□□□□□ -1.79
ATG38YLR211C NUP53Q03790 475 aa3.87□□□□□ -1.79
ATG38YLR211C SND1Q04007 877 aa3.87□□□□□ -1.79
ATG38YLR211C RRI1Q12468 440 aa3.87□□□□□ -1.79
ATG38YLR211C PDE1P22434 369 aa3.86□□□□□ -1.79
ATG38YLR211C YCR043CP25361 127 aa3.86□□□□□ -1.79
ATG38YLR211C SIP1P32578 815 aa3.86□□□□□ -1.79
ATG38YLR211C ARN1P38731 627 aa3.86□□□□□ -1.79
ATG38YLR211C VPS41P38959 992 aa3.86□□□□□ -1.79
ATG38YLR211C YIR016WP40572 265 aa3.86□□□□□ -1.79
ATG38YLR211C TAM41P53230 385 aa3.86□□□□□ -1.79
ATG38YLR211C YGR079WP53249 370 aa3.86□□□□□ -1.79
ATG38YLR211C EAF7P53911 425 aaKnown RBP3.86□□□□□ -1.79
ATG38YLR211C MOT3P54785 490 aaKnown RBP3.86□□□□□ -1.79
ATG38YLR211C VTC3Q02725 835 aa3.86□□□□□ -1.79
ATG38YLR211C YOL114CQ12322 202 aa3.86□□□□□ -1.79
ATG38YLR211C SIR1P21691 654 aa3.85□□□□□ -1.79
ATG38YLR211C LAC1P28496 418 aa3.85□□□□□ -1.79
ATG38YLR211C HES1P35843 434 aa3.85□□□□□ -1.79
ATG38YLR211C YPT11P48559 417 aa3.85□□□□□ -1.79
ATG38YLR211C ECM22Q05958 814 aaPredicted RBP3.85□□□□□ -1.79
ATG38YLR211C THI3Q07471 609 aa3.85□□□□□ -1.79
ATG38YLR211C BUD7Q08754 746 aa3.85□□□□□ -1.79
ATG38YLR211C UBX3Q12229 455 aa3.85□□□□□ -1.79
ATG38YLR211C YFL068WP0CX99 160 aa3.84□□□□□ -1.79
ATG38YLR211C YLL066W-AP0CY00 160 aa3.84□□□□□ -1.79
ATG38YLR211C YLL067W-AP0CY01 160 aa3.84□□□□□ -1.79
ATG38YLR211C SWI4P25302 1093 aaKnown RBP3.84□□□□□ -1.79
ATG38YLR211C URK1P27515 501 aa3.84□□□□□ -1.79
ATG38YLR211C NIC96P34077 839 aa3.84□□□□□ -1.79
ATG38YLR211C BUD16P39988 312 aa3.84□□□□□ -1.79
ATG38YLR211C PEX8P53248 589 aa3.84□□□□□ -1.79
ATG38YLR211C EIS1Q05050 843 aaKnown RBP3.84□□□□□ -1.79
ATG38YLR211C SUL2Q12325 893 aa3.84□□□□□ -1.79
ATG38YLR211C RPL42AP0CX27 106 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C RPL42BP0CX28 106 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C MCM3P24279 971 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C GCS1P35197 352 aa3.83□□□□□ -1.8
ATG38YLR211C ARC40P38328 384 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C TPA1P40032 644 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C TES1P41903 349 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C MAF1P41910 395 aa3.83□□□□□ -1.8
ATG38YLR211C YMR034CQ05131 434 aaPredicted RBP3.83□□□□□ -1.8
ATG38YLR211C PDR8Q06149 701 aa3.83□□□□□ -1.8
ATG38YLR211C BRE1Q07457 700 aaKnown RBP3.83□□□□□ -1.8
ATG38YLR211C MLH2Q07980 695 aa3.83□□□□□ -1.8
ATG38YLR211C NDD1Q08887 554 aa3.83□□□□□ -1.8
ATG38YLR211C ADE3P07245 946 aaKnown RBP3.82□□□□□ -1.8
ATG38YLR211C YRB30P53107 440 aaPredicted RBP3.82□□□□□ -1.8
ATG38YLR211C BOP3P53958 396 aa3.82□□□□□ -1.8
ATG38YLR211C GTB1Q04924 702 aa3.82□□□□□ -1.8
ATG38YLR211C PCT1P13259 424 aa3.81□□□□□ -1.8
ATG38YLR211C RIT1P23796 513 aa3.81□□□□□ -1.8
ATG38YLR211C RGT1P32862 1170 aa3.81□□□□□ -1.8
ATG38YLR211C OCT1P35999 772 aa3.81□□□□□ -1.8
ATG38YLR211C SCO2P38072 301 aa3.81□□□□□ -1.8
ATG38YLR211C CAB2P40506 365 aa3.81□□□□□ -1.8
ATG38YLR211C MSY1P48527 492 aa3.81□□□□□ -1.8
ATG38YLR211C YGL036WP53185 909 aaPredicted RBP3.81□□□□□ -1.8
ATG38YLR211C TEP1P53916 434 aa3.81□□□□□ -1.8
ATG38YLR211C PIG1Q06216 648 aa3.81□□□□□ -1.8
ATG38YLR211C GSH2Q08220 491 aa3.81□□□□□ -1.8
ATG38YLR211C DSE3Q08729 430 aa3.81□□□□□ -1.8
ATG38YLR211C YER145C-AA0A023PYF4 145 aa3.8□□□□□ -1.8
ATG38YLR211C POL3P15436 1097 aa3.8□□□□□ -1.8
ATG38YLR211C SPC72P39723 622 aa3.8□□□□□ -1.8
ATG38YLR211C QRI7P43122 407 aa3.8□□□□□ -1.8
ATG38YLR211C YNL144CP53907 740 aa3.8□□□□□ -1.8
ATG38YLR211C YPL108WQ02872 168 aaPredicted RBP3.8□□□□□ -1.8
ATG38YLR211C ECM16Q04217 1267 aaKnown RBP3.8□□□□□ -1.8
ATG38YLR211C YDR109CQ04585 715 aa3.8□□□□□ -1.8
ATG38YLR211C YLR112WQ12130 139 aa3.8□□□□□ -1.8
ATG38YLR211C RVB2Q12464 471 aaKnown RBP3.8□□□□□ -1.8
ATG38YLR211C BIK1P11709 440 aa3.79□□□□□ -1.8
ATG38YLR211C SST2P11972 698 aaKnown RBP3.79□□□□□ -1.8
ATG38YLR211C YSP3P25036 478 aa3.79□□□□□ -1.8
ATG38YLR211C MSS51P32335 436 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms