RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC58	YLR033W	CSG2	P35206	410 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	MRP8	P35719	219 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	CCL1	P37366	393 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	AGP2	P38090	596 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	YMR124W	P39523	943 aa	Known RBP	4.37	□□□□□ -1.71
RSC58	YLR033W	SAH1	P39954	449 aa	Known RBP	4.37	□□□□□ -1.71
RSC58	YLR033W	KAP123	P40069	1113 aa	Known RBP	4.37	□□□□□ -1.71
RSC58	YLR033W	SEC9	P40357	651 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	OPT1	P40897	799 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	ZAP1	P47043	880 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	PNG1	Q02890	363 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	TSR1	Q07381	788 aa	Known RBP	4.37	□□□□□ -1.71
RSC58	YLR033W	YLR001C	Q07895	862 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	MDM38	Q08179	573 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	NEW1	Q08972	1196 aa	Known RBP	4.37	□□□□□ -1.71
RSC58	YLR033W	YPR027C	Q12079	277 aa		4.37	□□□□□ -1.71
RSC58	YLR033W	PRC1	P00729	532 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	CHS1	P08004	1131 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	HSF1	P10961	833 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	MSD1	P15179	658 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	RAD57	P25301	460 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	GYP6	P32806	458 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	STO1	P34160	861 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	YKL050C	P35736	922 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	CUE2	P36075	443 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	APN2	P38207	520 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	CBR1	P38626	284 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	SET5	P38890	526 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	IRR1	P40541	1150 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	URM1	P40554	99 aa	Predicted RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	RSC8	P43609	557 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	TIM54	P47045	478 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	SPC98	P53540	846 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	STP1	Q00947	519 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	EMI2	Q04409	500 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	IRC10	Q08118	586 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	AHC1	Q12433	566 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	SNF1	P06782	633 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	PET123	P17558	318 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	VPS3	P23643	1011 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	CYS3	P31373	394 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	PEX2	P32800	271 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	GCS1	P35197	352 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	MRPL7	P36519	292 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	KTR4	P38131	464 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	YHR202W	P38887	602 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	BUD16	P39988	312 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	YJR054W	P47114	497 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
RSC58	YLR033W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
RSC58	YLR033W	ALF1	P53904	254 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	GPD1	Q00055	391 aa	Known RBP	4.36	□□□□□ -1.71
RSC58	YLR033W	MUB1	Q03162	620 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	SOV1	Q04748	898 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	FMP25	Q08023	583 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	SIL1	Q08199	421 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	ACF2	Q12168	779 aa		4.36	□□□□□ -1.71
RSC58	YLR033W	GAL80	P04387	435 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	HAP2	P06774	265 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	SAT4	P25333	603 aa	Known RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	VBA3	P25594	458 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	SEC21	P32074	935 aa	Known RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	FRE1	P32791	686 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	PCM1	P38628	557 aa	Known RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	CAJ1	P39101	391 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	YEL075C	P39972	122 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	FMP10	P40098	244 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	YTA12	P40341	825 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	EFM4	P40516	257 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	FAF1	P40546	346 aa	Predicted RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	PHO86	P46956	311 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	POL31	P46957	487 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	PFD1	P46988	109 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	ASG7	P46993	209 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	APT1	P49435	187 aa	Known RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	YGL036W	P53185	909 aa	Predicted RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	MZM1	Q03429	123 aa	Predicted RBP	4.35	□□□□□ -1.71
RSC58	YLR033W	GYL1	Q04322	720 aa		4.35	□□□□□ -1.71
RSC58	YLR033W	KAR3	P17119	729 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	RFS1	P38234	210 aa	Known RBP	4.34	□□□□□ -1.71
RSC58	YLR033W	YHR020W	P38708	688 aa	Known RBP	4.34	□□□□□ -1.71
RSC58	YLR033W	TCD1	P38756	429 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	GIC1	P38785	314 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	RPT2	P40327	437 aa	Known RBP	4.34	□□□□□ -1.71
RSC58	YLR033W	YFL052W	P43551	465 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	MND1	P53102	219 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	MET13	P53128	600 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	YGR021W	P53212	290 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	DIG1	Q03063	452 aa	Known RBP	4.34	□□□□□ -1.71
RSC58	YLR033W	YDR222W	Q04925	415 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	OMS1	Q06668	471 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	SDH5	Q08230	162 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	GUP2	Q08929	609 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	DAS2	Q12084	232 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	TRM13	Q12383	476 aa		4.34	□□□□□ -1.71
RSC58	YLR033W	JIP3	O13555	125 aa		4.33	□□□□□ -1.72
RSC58	YLR033W	RPS3	P05750	240 aa	Known RBP	4.33	□□□□□ -1.72
RSC58	YLR033W	TPK1	P06244	397 aa		4.33	□□□□□ -1.72
RSC58	YLR033W	ERG11	P10614	530 aa		4.33	□□□□□ -1.72
RSC58	YLR033W	LRE1	P25579	583 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms