RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YVC1	Q12324	675 aa		3.88	□□□□□ -1.79
SGN1	YIR001C	SPO21	Q12411	609 aa		3.88	□□□□□ -1.79
SGN1	YIR001C	YOL098C	Q12496	1037 aa		3.88	□□□□□ -1.79
SGN1	YIR001C	AI5_BETA	Q9ZZX0	354 aa		3.88	□□□□□ -1.79
SGN1	YIR001C	GCD1	P09032	578 aa	Predicted RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	YER152C	P10356	443 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	PYC1	P11154	1178 aa	Known RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	PRE9	P23638	258 aa	Known RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	ERG6	P25087	383 aa	Known RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	PSO2	P30620	661 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	ELM1	P32801	640 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	TYE7	P33122	291 aa	Predicted RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	PXA2	P34230	853 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	MRPL40	P36534	297 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	YER158C	P40095	573 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	LTP1	P40347	161 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	CIR1	P42940	261 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	RTT101	P47050	842 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	ECL1	P48235	211 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	TRM112	P53738	135 aa	Predicted RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	YLR297W	Q05899	129 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	RSA3	Q05942	220 aa	Known RBP	3.87	□□□□□ -1.79
SGN1	YIR001C	COG4	Q06096	861 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	YLR456W	Q06199	204 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	YFT2	Q06676	274 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	YLR012C	Q07927	99 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	PEX15	Q08215	383 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	YOL075C	Q08234	1294 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	LCB4	Q12246	624 aa		3.87	□□□□□ -1.79
SGN1	YIR001C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	RIP-Chip
SGN1	YIR001C	RPL22A	P05749	121 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	ADE3	P07245	946 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	PPR1	P07272	904 aa	Predicted RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	SPT15	P13393	240 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	CYC8	P14922	966 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	YIH1	P25637	258 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	APL1	P27351	700 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	CDC11	P32458	415 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	WBP1	P33767	430 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	YKT6	P36015	200 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	URA8	P38627	578 aa	Predicted RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	WSC4	P38739	605 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	PPE1	P38796	400 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	PFS1	P38872	237 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	UME6	P39001	836 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	ERV46	P39727	415 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	DSN1	P40568	576 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	ASG7	P46993	209 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	AIM23	P47015	356 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	YGR237C	P50089	785 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	HOP2	P53187	214 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	YNL144C	P53907	740 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	TPP1	Q03796	238 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	VMS1	Q04311	632 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	DIS3	Q08162	1001 aa	Known RBP	3.86	□□□□□ -1.79
SGN1	YIR001C	THI20	Q08224	551 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	HFA1	P32874	2273 aa		3.86	□□□□□ -1.79
SGN1	YIR001C	BRF1	P29056	596 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	ABZ1	P37254	787 aa	Predicted RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	CBR1	P38626	284 aa	Known RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	RRP3	P38712	501 aa	Known RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	BCD1	P38772	366 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	QNS1	P38795	714 aa	Known RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	PEX7	P39108	375 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	PIC2	P40035	300 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	SER33	P40510	469 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	SAP185	P40856	1058 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	STU2	P46675	888 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	SDH1	Q00711	640 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	RPN4	Q03465	531 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	RRP15	Q06511	250 aa	Predicted RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	SPO75	Q07798	868 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	SAM4	Q08985	325 aa	Known RBP	3.85	□□□□□ -1.79
SGN1	YIR001C	PER33	Q12144	273 aa		3.85	□□□□□ -1.79
SGN1	YIR001C	CDC37	P06101	506 aa	Known RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	CDC33	P07260	213 aa	Known RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	RPL1A	P0CX43	217 aa	Known RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	RPL1B	P0CX44	217 aa	Known RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	POL30	P15873	258 aa	Known RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	DAL81	P21657	970 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	GYP6	P32806	458 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	MUM2	P38236	366 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	YHL012W	P38709	493 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	STL1	P39932	569 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	VAC8	P39968	578 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	YEL075C	P39972	122 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	YJL070C	P40361	888 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	ASG1	P40467	964 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	FET5	P43561	622 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	CNN1	P43618	361 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	MRX6	P48564	524 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	TAN1	P53072	289 aa	Predicted RBP	3.84	□□□□□ -1.79
SGN1	YIR001C	COG7	P53195	279 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	YGR266W	P53326	701 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	SUN4	P53616	420 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	NRM1	P53718	249 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	SWS2	P53937	143 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	SIW14	P53965	281 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	TRM82	Q03774	444 aa		3.84	□□□□□ -1.79
SGN1	YIR001C	AIM32	Q04689	311 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms