RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W PHO89P38361 574 aa11.38□□□□□ -0.59
SIM1YIL123W URA8P38627 578 aaPredicted RBP11.38□□□□□ -0.59
SIM1YIL123W YHI9P38765 294 aa11.38□□□□□ -0.59
SIM1YIL123W KTR7P40504 517 aa11.38□□□□□ -0.59
SIM1YIL123W SEC28P40509 296 aaKnown RBP11.38□□□□□ -0.59
SIM1YIL123W MAD3P47074 515 aa11.38□□□□□ -0.59
SIM1YIL123W NNF2P53253 936 aa11.38□□□□□ -0.59
SIM1YIL123W IST1P53843 298 aaPredicted RBP11.38□□□□□ -0.59
SIM1YIL123W ADE12P80210 433 aaKnown RBP11.38□□□□□ -0.59
SIM1YIL123W UBP2Q01476 1272 aa11.38□□□□□ -0.59
SIM1YIL123W PNG1Q02890 363 aa11.38□□□□□ -0.59
SIM1YIL123W BUD20Q08004 166 aaPredicted RBP11.38□□□□□ -0.59
SIM1YIL123W OSW1Q08692 278 aa11.38□□□□□ -0.59
SIM1YIL123W OCA6Q12454 224 aa11.38□□□□□ -0.59
SIM1YIL123W YMR030W-AQ3E760 96 aa11.38□□□□□ -0.59
SIM1YIL123W HSP26P15992 214 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
SIM1YIL123W NPP1P25353 742 aa11.37□□□□□ -0.59
SIM1YIL123W OXP1P28273 1286 aa11.37□□□□□ -0.59
SIM1YIL123W YDR089WP38966 869 aa11.37□□□□□ -0.59
SIM1YIL123W VAC8P39968 578 aa11.37□□□□□ -0.59
SIM1YIL123W RRN7P40992 514 aa11.37□□□□□ -0.59
SIM1YIL123W RNY1Q02933 434 aaKnown RBP11.37□□□□□ -0.59
SIM1YIL123W TVP15Q03860 143 aa11.37□□□□□ -0.59
SIM1YIL123W PGC1Q08959 321 aa11.37□□□□□ -0.59
SIM1YIL123W NDJ1Q12366 352 aa11.37□□□□□ -0.59
SIM1YIL123W YLR422WQ06409 1932 aa11.37□□□□□ -0.59
SIM1YIL123W PRC1P00729 532 aa11.36□□□□□ -0.59
SIM1YIL123W SEC6P32844 805 aa11.36□□□□□ -0.59
SIM1YIL123W FZO1P38297 855 aa11.36□□□□□ -0.59
SIM1YIL123W MEF2P39677 819 aa11.36□□□□□ -0.59
SIM1YIL123W MMF1P40185 145 aaKnown RBP11.36□□□□□ -0.59
SIM1YIL123W CHS6P40955 746 aa11.36□□□□□ -0.59
SIM1YIL123W TAN1P53072 289 aaPredicted RBP11.36□□□□□ -0.59
SIM1YIL123W NOP15P53927 220 aaPredicted RBP11.36□□□□□ -0.59
SIM1YIL123W CDC14Q00684 551 aa11.36□□□□□ -0.59
SIM1YIL123W GTB1Q04924 702 aa11.36□□□□□ -0.59
SIM1YIL123W ECM38Q05902 660 aaPredicted RBP11.36□□□□□ -0.59
SIM1YIL123W ACO1P19414 778 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
SIM1YIL123W MLS1P30952 554 aa11.35□□□□□ -0.59
SIM1YIL123W WHI3P34761 661 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W BTT1P40314 149 aaPredicted RBP11.35□□□□□ -0.59
SIM1YIL123W TRF5P48561 642 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W RNR4P49723 345 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W TFB2Q02939 513 aa11.35□□□□□ -0.59
SIM1YIL123W LPX1Q12405 387 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W ERG20P08524 352 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W VAN1P23642 535 aa11.35□□□□□ -0.59
SIM1YIL123W RAD16P31244 790 aa11.35□□□□□ -0.59
SIM1YIL123W SSE1P32589 693 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W CTP1P38152 299 aa11.35□□□□□ -0.59
SIM1YIL123W MRP21P38175 177 aa11.35□□□□□ -0.59
SIM1YIL123W MNN1P39106 762 aa11.35□□□□□ -0.59
SIM1YIL123W NUP60P39705 539 aa11.35□□□□□ -0.59
SIM1YIL123W SEO1P39709 593 aa11.35□□□□□ -0.59
SIM1YIL123W ASN2P49090 572 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W TEL2P53038 688 aa11.35□□□□□ -0.59
SIM1YIL123W STR3P53101 465 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W MRM2P53123 320 aa11.35□□□□□ -0.59
SIM1YIL123W YLR012CQ07927 99 aa11.35□□□□□ -0.59
SIM1YIL123W TMA46Q12000 345 aaKnown RBP11.35□□□□□ -0.59
SIM1YIL123W GNT1Q12096 491 aa11.35□□□□□ -0.59
SIM1YIL123W MNL2Q12205 849 aa11.35□□□□□ -0.59
SIM1YIL123W PWP1P21304 576 aaKnown RBP11.34□□□□□ -0.59
SIM1YIL123W ADD66P36040 267 aa11.34□□□□□ -0.59
SIM1YIL123W RRN3P36070 627 aa11.34□□□□□ -0.59
SIM1YIL123W ATG12P38316 186 aa11.34□□□□□ -0.59
SIM1YIL123W YHL041WP38730 149 aa11.34□□□□□ -0.59
SIM1YIL123W YHR182WP38870 785 aa11.34□□□□□ -0.59
SIM1YIL123W STN1P38960 494 aa11.34□□□□□ -0.59
SIM1YIL123W JHD1P40034 492 aa11.34□□□□□ -0.59
SIM1YIL123W HOS4P40480 1083 aa11.34□□□□□ -0.59
SIM1YIL123W IST3P40565 148 aaPredicted RBP11.34□□□□□ -0.59
SIM1YIL123W BST1P43571 1029 aa11.34□□□□□ -0.59
SIM1YIL123W UBP6P43593 499 aaKnown RBP11.34□□□□□ -0.59
SIM1YIL123W TRM112P53738 135 aaPredicted RBP11.34□□□□□ -0.59
SIM1YIL123W RSC4Q02206 625 aa11.34□□□□□ -0.59
SIM1YIL123W TRS31Q03337 283 aa11.34□□□□□ -0.59
SIM1YIL123W SYT1Q06836 1226 aa11.34□□□□□ -0.59
SIM1YIL123W LDB18Q07887 179 aa11.34□□□□□ -0.59
SIM1YIL123W MPH2P0CD99 609 aa11.33□□□□□ -0.6
SIM1YIL123W SNT1P25357 1226 aa11.33□□□□□ -0.6
SIM1YIL123W MET22P32179 357 aa11.33□□□□□ -0.6
SIM1YIL123W GCD11P32481 527 aaKnown RBP11.33□□□□□ -0.6
SIM1YIL123W KAR9P32526 644 aa11.33□□□□□ -0.6
SIM1YIL123W TFC3P34111 1160 aa11.33□□□□□ -0.6
SIM1YIL123W UFE1P41834 346 aa11.33□□□□□ -0.6
SIM1YIL123W ILM1P47155 203 aa11.33□□□□□ -0.6
SIM1YIL123W PRP24P49960 444 aaKnown RBP11.33□□□□□ -0.6
SIM1YIL123W MET13P53128 600 aa11.33□□□□□ -0.6
SIM1YIL123W UTP8P53276 713 aaKnown RBP11.33□□□□□ -0.6
SIM1YIL123W TIM13P53299 105 aa11.33□□□□□ -0.6
SIM1YIL123W EMI2Q04409 500 aaKnown RBP11.33□□□□□ -0.6
SIM1YIL123W YDR109CQ04585 715 aa11.33□□□□□ -0.6
SIM1YIL123W PEX15Q08215 383 aa11.33□□□□□ -0.6
SIM1YIL123W STB3Q12427 513 aa11.33□□□□□ -0.6
SIM1YIL123W AAT2P23542 418 aaKnown RBP11.32□□□□□ -0.6
SIM1YIL123W SIP2P34164 415 aaKnown RBP11.32□□□□□ -0.6
SIM1YIL123W TGL4P36165 910 aa11.32□□□□□ -0.6
SIM1YIL123W YIR016WP40572 265 aa11.32□□□□□ -0.6
SIM1YIL123W RSC8P43609 557 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms