RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	AVT6	P40074	448 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	ZIM17	P42844	174 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	EPL1	P43572	832 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	PIP2	P52960	996 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	MCM6	P53091	1017 aa	Known RBP	3.1	□□□□□ -1.91
RRM3	YHR031C	LSB1	P53281	241 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	EEB1	Q02891	456 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	NSE5	Q03718	556 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	YDR179W-A	Q03983	463 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	YLL007C	Q07799	665 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	SGT1	Q08446	395 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	CTI6	Q08923	506 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	VPS54	Q12071	889 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	GET4	Q12125	312 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	TAH18	Q12181	623 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	HMS1	Q12398	434 aa		3.1	□□□□□ -1.91
RRM3	YHR031C	GDB1	Q06625	1536 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	ATP6	P00854	259 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	TRP3	P00937	484 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YGL041W-A	P0C5N3	154 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	SEC63	P14906	663 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	OM45	P16547	393 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	PRP4	P20053	465 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	REC107	P21651	314 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	PRE9	P23638	258 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	LCB1	P25045	558 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	NAM9	P27929	486 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	MLF3	P32047	452 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	EFT1	P32324	842 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	MKK2	P32491	506 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	CYM1	P32898	989 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	BET3	P36149	193 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	TAT1	P38085	619 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	ERT1	P38140	529 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	SEA4	P38164	1038 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
RRM3	YHR031C	PEX32	P38292	413 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	MSS4	P38994	779 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	SSN3	P39073	555 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	TOK1	P40310	691 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	PDS1	P40316	373 aa	Predicted RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	SHQ1	P40486	507 aa	Predicted RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	CIN5	P40917	295 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	ELP2	P42935	788 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	UBP6	P43593	499 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	SAM37	P50110	327 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YKE2	P52553	114 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	MNT2	P53059	558 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YGR125W	P53273	1036 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	DSE4	P53753	1117 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	IMP4	P53941	290 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	VAC7	P53950	1165 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	MPS1	P54199	764 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	RSC4	Q02206	625 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	ATP25	Q03153	612 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	ARP9	Q05123	467 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	SPO77	Q06134	477 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	VAC14	Q06708	880 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YLR001C	Q07895	862 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
RRM3	YHR031C	RPN8	Q08723	338 aa	Known RBP	3.09	□□□□□ -1.91
RRM3	YHR031C	NUR1	Q12066	484 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	BAG7	Q12128	409 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	HUA2	Q12134	243 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YPR022C	Q12139	1133 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	NYV1	Q12255	253 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	AHC1	Q12433	566 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	SRN2	Q99176	213 aa		3.09	□□□□□ -1.91
RRM3	YHR031C	YCF1	P39109	1515 aa	Known RBP	3.09	□□□□□ -1.92
RRM3	YHR031C	BNR1	P40450	1375 aa		3.09	□□□□□ -1.92
RRM3	YHR031C	YLR278C	Q05854	1341 aa		3.09	□□□□□ -1.92
RRM3	YHR031C	CBP2	P03874	630 aa	Predicted RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	RPS31	P05759	152 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	PUT4	P15380	627 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	FRS2	P15625	503 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	ADY2	P25613	283 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	CWH43	P25618	953 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	PEP3	P27801	918 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	MEI5	P32489	222 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	WHI3	P34761	661 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	SHM1	P37292	490 aa	Predicted RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	AAP1	P37898	856 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	ECM31	P38122	312 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	RFS1	P38234	210 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	MSG5	P38590	489 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	SBE22	P38814	852 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	SAW1	P39735	261 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	YER184C	P39961	794 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	BUD16	P39988	312 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	PCL7	P40186	285 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	NDE1	P40215	560 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	HPM1	P40481	377 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	NEO1	P40527	1151 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	PKP1	P40530	394 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	RGD2	P43556	714 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	LSM8	P47093	109 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	AIM24	P47127	394 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	UTP8	P53276	713 aa	Known RBP	3.08	□□□□□ -1.92
RRM3	YHR031C	MNT4	P53745	580 aa		3.08	□□□□□ -1.92
RRM3	YHR031C	CNM67	P53865	581 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms