RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YHR054CP38780 354 aa5.8□□□□□ -1.48
VMA16YHR026W NBP1P52919 319 aaPredicted RBP5.8□□□□□ -1.48
VMA16YHR026W NOP13P53883 403 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
VMA16YHR026W GIR2Q03768 265 aaPredicted RBP5.8□□□□□ -1.48
VMA16YHR026W RRB1Q04225 511 aaKnown RBP5.8□□□□□ -1.48
VMA16YHR026W POB3Q04636 552 aaKnown RBP5.8□□□□□ -1.48
VMA16YHR026W TDA5Q06417 326 aaKnown RBP5.8□□□□□ -1.48
VMA16YHR026W YPL216WQ08964 1102 aa5.8□□□□□ -1.48
VMA16YHR026W YPL277CQ08989 487 aa5.8□□□□□ -1.48
VMA16YHR026W NUR1Q12066 484 aa5.8□□□□□ -1.48
VMA16YHR026W GNT1Q12096 491 aa5.8□□□□□ -1.48
VMA16YHR026W BI4P03879 638 aa5.79□□□□□ -1.48
VMA16YHR026W TPK1P06244 397 aa5.79□□□□□ -1.48
VMA16YHR026W FPR1P20081 114 aaKnown RBP5.79□□□□□ -1.48
VMA16YHR026W DBP2P24783 546 aaKnown RBP5.79□□□□□ -1.48
VMA16YHR026W YSC83P32792 385 aa5.79□□□□□ -1.48
VMA16YHR026W STE5P32917 917 aa5.79□□□□□ -1.48
VMA16YHR026W NIP100P33420 868 aa5.79□□□□□ -1.48
VMA16YHR026W UTH1P36135 365 aa5.79□□□□□ -1.48
VMA16YHR026W VBA5P36172 582 aa5.79□□□□□ -1.48
VMA16YHR026W YBR056WP38081 501 aa5.79□□□□□ -1.48
VMA16YHR026W UBP13P38187 747 aa5.79□□□□□ -1.48
VMA16YHR026W LEU5P38702 357 aa5.79□□□□□ -1.48
VMA16YHR026W SMF1P38925 575 aa5.79□□□□□ -1.48
VMA16YHR026W MBP1P39678 833 aa5.79□□□□□ -1.48
VMA16YHR026W BTN2P53286 410 aa5.79□□□□□ -1.48
VMA16YHR026W TOF1P53840 1238 aa5.79□□□□□ -1.48
VMA16YHR026W SOV1Q04748 898 aa5.79□□□□□ -1.48
VMA16YHR026W NOP6Q07623 225 aaKnown RBP5.79□□□□□ -1.48
VMA16YHR026W RLP24Q07915 199 aaKnown RBP5.79□□□□□ -1.48
VMA16YHR026W NDJ1Q12366 352 aa5.79□□□□□ -1.48
VMA16YHR026W YKL068W-AQ3E826 78 aa5.79□□□□□ -1.48
VMA16YHR026W GCN1P33892 2672 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W CDC8P00572 216 aa5.78□□□□□ -1.48
VMA16YHR026W RPL11AP0C0W9 174 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W TUP1P16649 713 aa5.78□□□□□ -1.48
VMA16YHR026W SNF5P18480 905 aa5.78□□□□□ -1.48
VMA16YHR026W KIN3P22209 435 aa5.78□□□□□ -1.48
VMA16YHR026W MUD2P36084 527 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W TIF5P38431 405 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W TDA3P38758 523 aa5.78□□□□□ -1.48
VMA16YHR026W ASN1P49089 572 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W YGR021WP53212 290 aa5.78□□□□□ -1.48
VMA16YHR026W ESBP6P53918 673 aa5.78□□□□□ -1.48
VMA16YHR026W RNT1Q02555 471 aa5.78□□□□□ -1.48
VMA16YHR026W YLR297WQ05899 129 aa5.78□□□□□ -1.48
VMA16YHR026W MLH2Q07980 695 aa5.78□□□□□ -1.48
VMA16YHR026W SGT2Q12118 346 aaKnown RBP5.78□□□□□ -1.48
VMA16YHR026W RPL11BQ3E757 174 aaPredicted RBP5.78□□□□□ -1.48
VMA16YHR026W ASP3-2P0CX77 362 aa5.77□□□□□ -1.49
VMA16YHR026W ASP3-3P0CX78 362 aa5.77□□□□□ -1.49
VMA16YHR026W ASP3-4P0CX79 362 aa5.77□□□□□ -1.49
VMA16YHR026W ASP3-1P0CZ17 362 aa5.77□□□□□ -1.49
VMA16YHR026W PHO8P11491 566 aa5.77□□□□□ -1.49
VMA16YHR026W AGP1P25376 633 aa5.77□□□□□ -1.49
VMA16YHR026W XRS2P33301 854 aa5.77□□□□□ -1.49
VMA16YHR026W TKL2P33315 681 aa5.77□□□□□ -1.49
VMA16YHR026W HSP78P33416 811 aa5.77□□□□□ -1.49
VMA16YHR026W JNM1P36224 373 aa5.77□□□□□ -1.49
VMA16YHR026W SHE3P38272 425 aaKnown RBP5.77□□□□□ -1.49
VMA16YHR026W NUP60P39705 539 aa5.77□□□□□ -1.49
VMA16YHR026W GDH3P39708 457 aa5.77□□□□□ -1.49
VMA16YHR026W SPF1P39986 1215 aaKnown RBP5.77□□□□□ -1.49
VMA16YHR026W YIL161WP40449 235 aaKnown RBP5.77□□□□□ -1.49
VMA16YHR026W GCN5Q03330 439 aa5.77□□□□□ -1.49
VMA16YHR026W SEG1Q04279 960 aa5.77□□□□□ -1.49
VMA16YHR026W VTI1Q04338 217 aa5.77□□□□□ -1.49
VMA16YHR026W UTP14Q04500 899 aaKnown RBP5.77□□□□□ -1.49
VMA16YHR026W PRM6Q04705 352 aa5.77□□□□□ -1.49
VMA16YHR026W RSC58Q07979 502 aa5.77□□□□□ -1.49
VMA16YHR026W RSB1Q08417 382 aa5.77□□□□□ -1.49
VMA16YHR026W GPM2Q12008 311 aa5.77□□□□□ -1.49
VMA16YHR026W RMP1Q12530 201 aa5.77□□□□□ -1.49
VMA16YHR026W DAL7P21826 554 aa5.76□□□□□ -1.49
VMA16YHR026W MSH1P25846 959 aa5.76□□□□□ -1.49
VMA16YHR026W SBA1P28707 216 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W OLA1P38219 394 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W CCZ1P38273 704 aa5.76□□□□□ -1.49
VMA16YHR026W PIK1P39104 1066 aa5.76□□□□□ -1.49
VMA16YHR026W YMR124WP39523 943 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W YER158CP40095 573 aa5.76□□□□□ -1.49
VMA16YHR026W OSW5P40219 148 aa5.76□□□□□ -1.49
VMA16YHR026W TAD1P53065 400 aa5.76□□□□□ -1.49
VMA16YHR026W KAP114P53067 1004 aa5.76□□□□□ -1.49
VMA16YHR026W CWC22P53333 577 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W CEG1Q01159 459 aaPredicted RBP5.76□□□□□ -1.49
VMA16YHR026W SMA1Q02651 245 aa5.76□□□□□ -1.49
VMA16YHR026W HEL2Q05580 639 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W DON1Q05610 365 aa5.76□□□□□ -1.49
VMA16YHR026W CSR1Q06705 408 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W YLR001CQ07895 862 aa5.76□□□□□ -1.49
VMA16YHR026W NBA1Q08229 501 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W RIO1Q12196 484 aaKnown RBP5.76□□□□□ -1.49
VMA16YHR026W REV1P12689 985 aa5.75□□□□□ -1.49
VMA16YHR026W SFP1P32432 683 aa5.75□□□□□ -1.49
VMA16YHR026W GCG1P32656 232 aaKnown RBP5.75□□□□□ -1.49
VMA16YHR026W PIN4P34217 668 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
VMA16YHR026W BLI1P35727 113 aa5.75□□□□□ -1.49
VMA16YHR026W SRX1P36077 127 aa5.75□□□□□ -1.49
VMA16YHR026W BAP2P38084 609 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms