RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W UBR1P19812 1950 aa9.12□□□□□ -0.95
CPD1YGR247W MPH2P0CD99 609 aa9.12□□□□□ -0.95
CPD1YGR247W PPH21P23594 369 aa9.12□□□□□ -0.95
CPD1YGR247W MCM2P29469 868 aa9.12□□□□□ -0.95
CPD1YGR247W HXT3P32466 567 aaKnown RBP9.12□□□□□ -0.95
CPD1YGR247W AIM26P32858 118 aa9.12□□□□□ -0.95
CPD1YGR247W MRS6P32864 603 aaKnown RBP9.12□□□□□ -0.95
CPD1YGR247W SCD5P34758 872 aa9.12□□□□□ -0.95
CPD1YGR247W CCT6P39079 546 aa9.12□□□□□ -0.95
CPD1YGR247W ATM1P40416 690 aa9.12□□□□□ -0.95
CPD1YGR247W SWC4P53201 476 aa9.12□□□□□ -0.95
CPD1YGR247W YGR127WP53275 312 aa9.12□□□□□ -0.95
CPD1YGR247W ARG7Q04728 441 aa9.12□□□□□ -0.95
CPD1YGR247W RRP6Q12149 733 aaKnown RBP9.12□□□□□ -0.95
CPD1YGR247W RED1P14291 827 aa9.11□□□□□ -0.95
CPD1YGR247W RBK1P25332 333 aa9.11□□□□□ -0.95
CPD1YGR247W MEI4P29467 408 aa9.11□□□□□ -0.95
CPD1YGR247W IRS4P36115 615 aaKnown RBP9.11□□□□□ -0.95
CPD1YGR247W PMC1P38929 1173 aaPredicted RBP9.11□□□□□ -0.95
CPD1YGR247W CTK3P46963 296 aaPredicted RBP9.11□□□□□ -0.95
CPD1YGR247W REG1Q00816 1014 aa9.11□□□□□ -0.95
CPD1YGR247W VPS68Q12016 184 aa9.11□□□□□ -0.95
CPD1YGR247W COX5AP00424 153 aa9.1□□□□□ -0.95
CPD1YGR247W TUB1P09733 447 aaKnown RBP9.1□□□□□ -0.95
CPD1YGR247W UBA1P22515 1024 aaKnown RBP9.1□□□□□ -0.95
CPD1YGR247W DBF4P32325 704 aa9.1□□□□□ -0.95
CPD1YGR247W RPH1P39956 796 aa9.1□□□□□ -0.95
CPD1YGR247W ELO3P40319 345 aa9.1□□□□□ -0.95
CPD1YGR247W BUD13P46947 266 aaPredicted RBP9.1□□□□□ -0.95
CPD1YGR247W ATG16Q03818 150 aa9.1□□□□□ -0.95
CPD1YGR247W YMR018WQ04364 514 aa9.1□□□□□ -0.95
CPD1YGR247W HBT1Q07653 1046 aaKnown RBP9.1□□□□□ -0.95
CPD1YGR247W LDB18Q07887 179 aa9.1□□□□□ -0.95
CPD1YGR247W AAD15Q08361 143 aa9.1□□□□□ -0.95
CPD1YGR247W GLN4P13188 809 aaKnown RBP9.09□□□□□ -0.95
CPD1YGR247W GAL11P19659 1081 aa9.09□□□□□ -0.95
CPD1YGR247W BEM1P29366 551 aa9.09□□□□□ -0.95
CPD1YGR247W SPR1P32603 445 aa9.09□□□□□ -0.95
CPD1YGR247W TFA2P36145 328 aa9.09□□□□□ -0.95
CPD1YGR247W OTU2P38747 307 aaKnown RBP9.09□□□□□ -0.95
CPD1YGR247W STN1P38960 494 aa9.09□□□□□ -0.95
CPD1YGR247W CSN12P47130 423 aa9.09□□□□□ -0.95
CPD1YGR247W STR3P53101 465 aaKnown RBP9.09□□□□□ -0.95
CPD1YGR247W YGL108CP53139 140 aa9.09□□□□□ -0.95
CPD1YGR247W YGR021WP53212 290 aa9.09□□□□□ -0.95
CPD1YGR247W TIM13P53299 105 aa9.09□□□□□ -0.95
CPD1YGR247W EGD1Q02642 157 aaKnown RBP9.09□□□□□ -0.95
CPD1YGR247W OPY2Q06810 360 aa9.09□□□□□ -0.95
CPD1YGR247W YPR089WO13585 888 aa9.08□□□□□ -0.96
CPD1YGR247W SCL1P21243 252 aaKnown RBP9.08□□□□□ -0.96
CPD1YGR247W SEC15P22224 910 aa9.08□□□□□ -0.96
CPD1YGR247W YCR015CP25616 317 aa9.08□□□□□ -0.96
CPD1YGR247W PCA1P38360 1216 aa9.08□□□□□ -0.96
CPD1YGR247W RPL34BP40525 121 aaKnown RBP9.08□□□□□ -0.96
CPD1YGR247W ALR2P43553 858 aa9.08□□□□□ -0.96
CPD1YGR247W YFR018CP43599 363 aa9.08□□□□□ -0.96
CPD1YGR247W NOG2P53742 486 aaKnown RBP9.08□□□□□ -0.96
CPD1YGR247W NGL3Q03210 505 aa9.08□□□□□ -0.96
CPD1YGR247W UFO1Q04511 668 aa9.08□□□□□ -0.96
CPD1YGR247W THI7Q05998 598 aa9.08□□□□□ -0.96
CPD1YGR247W PUF3Q07807 879 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
CPD1YGR247W TRM8Q12009 286 aa9.08□□□□□ -0.96
CPD1YGR247W SEC39Q12745 709 aa9.08□□□□□ -0.96
CPD1YGR247W GCN1P33892 2672 aaKnown RBP9.07□□□□□ -0.96
CPD1YGR247W SPO12P17123 173 aa9.07□□□□□ -0.96
CPD1YGR247W PHO13P19881 312 aa9.07□□□□□ -0.96
CPD1YGR247W DCC1P25559 380 aa9.07□□□□□ -0.96
CPD1YGR247W TFC3P34111 1160 aa9.07□□□□□ -0.96
CPD1YGR247W BLI1P35727 113 aa9.07□□□□□ -0.96
CPD1YGR247W PIM1P36775 1133 aa9.07□□□□□ -0.96
CPD1YGR247W IML3P38265 245 aa9.07□□□□□ -0.96
CPD1YGR247W SPC72P39723 622 aa9.07□□□□□ -0.96
CPD1YGR247W YAL037WP39728 267 aa9.07□□□□□ -0.96
CPD1YGR247W DJP1P40564 432 aa9.07□□□□□ -0.96
CPD1YGR247W JJJ1P53863 590 aa9.07□□□□□ -0.96
CPD1YGR247W SSL2Q00578 843 aa9.07□□□□□ -0.96
CPD1YGR247W MSH6Q03834 1242 aa9.07□□□□□ -0.96
CPD1YGR247W ERF2Q06551 359 aa9.07□□□□□ -0.96
CPD1YGR247W PLB3Q08108 686 aa9.07□□□□□ -0.96
CPD1YGR247W YOL036WQ08206 761 aa9.07□□□□□ -0.96
CPD1YGR247W CBC2Q08920 208 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
CPD1YGR247W TGL5Q12043 749 aa9.07□□□□□ -0.96
CPD1YGR247W EMC1P25574 760 aa9.06□□□□□ -0.96
CPD1YGR247W RFA2P26754 273 aaKnown RBP9.06□□□□□ -0.96
CPD1YGR247W AEP1P32493 518 aa9.06□□□□□ -0.96
CPD1YGR247W YBR259WP38338 688 aa9.06□□□□□ -0.96
CPD1YGR247W HIS2P38635 335 aa9.06□□□□□ -0.96
CPD1YGR247W RTT107P38850 1070 aa9.06□□□□□ -0.96
CPD1YGR247W ZIM17P42844 174 aa9.06□□□□□ -0.96
CPD1YGR247W RGD2P43556 714 aa9.06□□□□□ -0.96
CPD1YGR247W BIR1P47134 954 aa9.06□□□□□ -0.96
CPD1YGR247W HXT16P47185 567 aa9.06□□□□□ -0.96
CPD1YGR247W COG1P53079 417 aa9.06□□□□□ -0.96
CPD1YGR247W HXT15P54854 567 aa9.06□□□□□ -0.96
CPD1YGR247W CDC14Q00684 551 aa9.06□□□□□ -0.96
CPD1YGR247W RSC4Q02206 625 aa9.06□□□□□ -0.96
CPD1YGR247W RSM10Q03201 203 aa9.06□□□□□ -0.96
CPD1YGR247W CIA1Q05583 330 aa9.06□□□□□ -0.96
CPD1YGR247W NEW1Q08972 1196 aaKnown RBP9.06□□□□□ -0.96
CPD1YGR247W FRT1Q99332 602 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 166.2 ms