RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C CDC60P26637 1090 aaKnown RBP3.82□□□□□ -1.8
MSM1YGR171C CDC5P32562 705 aa3.82□□□□□ -1.8
MSM1YGR171C PXA2P34230 853 aa3.82□□□□□ -1.8
MSM1YGR171C YKL050CP35736 922 aa3.82□□□□□ -1.8
MSM1YGR171C YJR061WP40355 935 aa3.82□□□□□ -1.8
MSM1YGR171C LYS14P40971 790 aa3.82□□□□□ -1.8
MSM1YGR171C CSL4P53859 292 aaPredicted RBP3.82□□□□□ -1.8
MSM1YGR171C ZPS1Q12512 249 aa3.82□□□□□ -1.8
MSM1YGR171C TY2A-LR1P0C2J4 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-FP0CX61 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-GR2P0CX62 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-CP25383 438 aa3.81□□□□□ -1.8
MSM1YGR171C MIT1P40002 666 aa3.81□□□□□ -1.8
MSM1YGR171C VTC2P43585 828 aa3.81□□□□□ -1.8
MSM1YGR171C SIP4P46954 829 aa3.81□□□□□ -1.8
MSM1YGR171C VPS73P53142 486 aaKnown RBP3.81□□□□□ -1.8
MSM1YGR171C TAM41P53230 385 aa3.81□□□□□ -1.8
MSM1YGR171C MEH1Q02205 184 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-DR2Q03483 438 aa3.81□□□□□ -1.8
MSM1YGR171C GFD1Q04839 188 aaKnown RBP3.81□□□□□ -1.8
MSM1YGR171C GRC3Q07845 632 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-BQ12260 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-OR2Q12293 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-DR1Q12392 438 aa3.81□□□□□ -1.8
MSM1YGR171C SNU66Q12420 587 aaPredicted RBP3.81□□□□□ -1.8
MSM1YGR171C TY2A-OR1Q12439 438 aa3.81□□□□□ -1.8
MSM1YGR171C TY2A-DR3Q99303 438 aa3.81□□□□□ -1.8
MSM1YGR171C AAC1P04710 309 aa3.81□□□□□ -1.8
MSM1YGR171C TPK2P06245 380 aa3.81□□□□□ -1.8
MSM1YGR171C WHI2P12611 486 aa3.81□□□□□ -1.8
MSM1YGR171C EBP2P36049 427 aaKnown RBP3.81□□□□□ -1.8
MSM1YGR171C ESL2P36168 1195 aa3.81□□□□□ -1.8
MSM1YGR171C YPT10P38146 199 aa3.81□□□□□ -1.8
MSM1YGR171C MUP3P38734 546 aa3.81□□□□□ -1.8
MSM1YGR171C COQ6P53318 479 aa3.81□□□□□ -1.8
MSM1YGR171C MTG1Q03151 367 aaPredicted RBP3.81□□□□□ -1.8
MSM1YGR171C TDA9Q04545 1251 aa3.81□□□□□ -1.8
MSM1YGR171C YLR352WQ06479 807 aa3.81□□□□□ -1.8
MSM1YGR171C IRC10Q08118 586 aa3.81□□□□□ -1.8
MSM1YGR171C TAH18Q12181 623 aa3.81□□□□□ -1.8
MSM1YGR171C YER175W-AQ8TGU4 54 aa3.81□□□□□ -1.8
MSM1YGR171C PNO1Q99216 274 aaKnown RBP3.81□□□□□ -1.8
MSM1YGR171C RPN13O13563 156 aa3.8□□□□□ -1.8
MSM1YGR171C STE12P13574 688 aa3.8□□□□□ -1.8
MSM1YGR171C MET8P15807 274 aa3.8□□□□□ -1.8
MSM1YGR171C SPO16P17122 198 aa3.8□□□□□ -1.8
MSM1YGR171C RNR3P21672 869 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C NOP4P37838 685 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C ARC1P46672 376 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C MPP10P47083 593 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C ASN1P49089 572 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C ASE1P50275 885 aa3.8□□□□□ -1.8
MSM1YGR171C REG1Q00816 1014 aa3.8□□□□□ -1.8
MSM1YGR171C RCF1Q03713 159 aa3.8□□□□□ -1.8
MSM1YGR171C YKU80Q04437 629 aa3.8□□□□□ -1.8
MSM1YGR171C RCO1Q04779 684 aa3.8□□□□□ -1.8
MSM1YGR171C VIP1Q06685 1146 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C CRT10Q08226 957 aa3.8□□□□□ -1.8
MSM1YGR171C TMA16Q08687 178 aa3.8□□□□□ -1.8
MSM1YGR171C HUA2Q12134 243 aa3.8□□□□□ -1.8
MSM1YGR171C ERG27Q12452 347 aaKnown RBP3.8□□□□□ -1.8
MSM1YGR171C CPA2P03965 1118 aaKnown RBP3.79□□□□□ -1.8
MSM1YGR171C RPB2P08518 1224 aaKnown RBP3.79□□□□□ -1.8
MSM1YGR171C CDC24P11433 854 aaPredicted RBP3.79□□□□□ -1.8
MSM1YGR171C URK1P27515 501 aa3.79□□□□□ -1.8
MSM1YGR171C MRP20P32387 263 aa3.79□□□□□ -1.8
MSM1YGR171C TDP1P38319 544 aa3.79□□□□□ -1.8
MSM1YGR171C PSD1P39006 500 aa3.79□□□□□ -1.8
MSM1YGR171C YIL161WP40449 235 aaKnown RBP3.79□□□□□ -1.8
MSM1YGR171C STU2P46675 888 aa3.79□□□□□ -1.8
MSM1YGR171C SGM1P47166 707 aa3.79□□□□□ -1.8
MSM1YGR171C VPS4P52917 437 aa3.79□□□□□ -1.8
MSM1YGR171C YGL117WP53133 265 aa3.79□□□□□ -1.8
MSM1YGR171C STP3Q05937 343 aa3.79□□□□□ -1.8
MSM1YGR171C NUS1Q12063 375 aa3.79□□□□□ -1.8
MSM1YGR171C RVB2Q12464 471 aaKnown RBP3.79□□□□□ -1.8
MSM1YGR171C YOR111WQ99210 232 aa3.79□□□□□ -1.8
MSM1YGR171C PDE1P22434 369 aa3.78□□□□□ -1.8
MSM1YGR171C ERG8P24521 451 aa3.78□□□□□ -1.8
MSM1YGR171C MRPL9P31334 269 aa3.78□□□□□ -1.8
MSM1YGR171C EMP70P32802 667 aa3.78□□□□□ -1.8
MSM1YGR171C ARO9P38840 513 aaPredicted RBP3.78□□□□□ -1.8
MSM1YGR171C MTG2P38860 518 aa3.78□□□□□ -1.8
MSM1YGR171C MAM1P40065 302 aa3.78□□□□□ -1.8
MSM1YGR171C CPR8P53728 308 aa3.78□□□□□ -1.8
MSM1YGR171C MRPL19P53875 158 aa3.78□□□□□ -1.8
MSM1YGR171C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
MSM1YGR171C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
MSM1YGR171C YBR255C-AQ3E776 120 aa3.78□□□□□ -1.8
MSM1YGR171C RPL19AP0CX82 189 aaKnown RBP3.78□□□□□ -1.8
MSM1YGR171C RPL19BP0CX83 189 aaPredicted RBP3.78□□□□□ -1.8
MSM1YGR171C PRE8P23639 250 aa3.78□□□□□ -1.8
MSM1YGR171C SAC6P32599 642 aaKnown RBP3.78□□□□□ -1.8
MSM1YGR171C YBR225WP38321 900 aa3.78□□□□□ -1.8
MSM1YGR171C BUD16P39988 312 aa3.78□□□□□ -1.8
MSM1YGR171C YIL166CP40445 542 aa3.78□□□□□ -1.8
MSM1YGR171C DUO1P53168 247 aaKnown RBP3.78□□□□□ -1.8
MSM1YGR171C YLR287CQ05881 355 aa3.78□□□□□ -1.8
MSM1YGR171C SWT1Q12104 458 aa3.78□□□□□ -1.8
MSM1YGR171C YBR126W-AQ8TGU7 68 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms