RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YBR085C-AO43137 85 aa2.42□□□□□ -2.02
CBF2YGR140W GAL10P04397 699 aa2.42□□□□□ -2.02
CBF2YGR140W DFR1P07807 211 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
CBF2YGR140W FBP1P09201 348 aa2.42□□□□□ -2.02
CBF2YGR140W STE12P13574 688 aa2.42□□□□□ -2.02
CBF2YGR140W MSB1P21339 1137 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W VMA16P23968 213 aa2.42□□□□□ -2.02
CBF2YGR140W DSS4P32601 143 aa2.42□□□□□ -2.02
CBF2YGR140W LOT5P34234 306 aa2.42□□□□□ -2.02
CBF2YGR140W POL12P38121 705 aaPredicted RBP2.42□□□□□ -2.02
CBF2YGR140W YHR054CP38780 354 aa2.42□□□□□ -2.02
CBF2YGR140W SMF1P38925 575 aa2.42□□□□□ -2.02
CBF2YGR140W ATF1P40353 525 aa2.42□□□□□ -2.02
CBF2YGR140W YIL077CP40508 320 aa2.42□□□□□ -2.02
CBF2YGR140W PKP1P40530 394 aa2.42□□□□□ -2.02
CBF2YGR140W OYE3P41816 400 aaPredicted RBP2.42□□□□□ -2.02
CBF2YGR140W JJJ3P47138 172 aa2.42□□□□□ -2.02
CBF2YGR140W FDC1Q03034 503 aa2.42□□□□□ -2.02
CBF2YGR140W SWT1Q12104 458 aa2.42□□□□□ -2.02
CBF2YGR140W SUL2Q12325 893 aa2.42□□□□□ -2.02
CBF2YGR140W PNO1Q99216 274 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W CYC1P00044 109 aaPredicted RBP2.42□□□□□ -2.02
CBF2YGR140W AI3P03877 415 aa2.42□□□□□ -2.02
CBF2YGR140W PHO84P25297 587 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W GBP2P25555 427 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
CBF2YGR140W NTH1P32356 751 aa2.42□□□□□ -2.02
CBF2YGR140W YHR112CP38716 378 aa2.42□□□□□ -2.02
CBF2YGR140W WSS1P38838 269 aa2.42□□□□□ -2.02
CBF2YGR140W MPT5P39016 859 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
CBF2YGR140W FTR1P40088 404 aa2.42□□□□□ -2.02
CBF2YGR140W SLZ1P40167 298 aa2.42□□□□□ -2.02
CBF2YGR140W MET18P40469 1032 aa2.42□□□□□ -2.02
CBF2YGR140W THI6P41835 540 aa2.42□□□□□ -2.02
CBF2YGR140W CCT7P42943 550 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W NOP9P47077 666 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W ARI1P53111 347 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W SSL2Q00578 843 aa2.42□□□□□ -2.02
CBF2YGR140W MAK10Q02197 733 aa2.42□□□□□ -2.02
CBF2YGR140W SSY1Q03770 852 aa2.42□□□□□ -2.02
CBF2YGR140W YDR131CQ03899 556 aa2.42□□□□□ -2.02
CBF2YGR140W RIB2Q12362 591 aaKnown RBP2.42□□□□□ -2.02
CBF2YGR140W SEC39Q12745 709 aa2.42□□□□□ -2.02
CBF2YGR140W CTF3Q12748 733 aa2.42□□□□□ -2.02
CBF2YGR140W PDE1P22434 369 aa2.41□□□□□ -2.02
CBF2YGR140W CAD1P24813 409 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W CAP1P28495 268 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W SSE1P32589 693 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W MTC7P32633 139 aa2.41□□□□□ -2.02
CBF2YGR140W LAS1P36146 502 aaPredicted RBP2.41□□□□□ -2.02
CBF2YGR140W EHT1P38295 451 aa2.41□□□□□ -2.02
CBF2YGR140W GDT1P38301 280 aaPredicted RBP2.41□□□□□ -2.02
CBF2YGR140W COS111P38308 924 aa2.41□□□□□ -2.02
CBF2YGR140W REV7P38927 245 aa2.41□□□□□ -2.02
CBF2YGR140W LYS9P38999 446 aa2.41□□□□□ -2.02
CBF2YGR140W PEX7P39108 375 aa2.41□□□□□ -2.02
CBF2YGR140W TMN3P40071 706 aa2.41□□□□□ -2.02
CBF2YGR140W PCL7P40186 285 aa2.41□□□□□ -2.02
CBF2YGR140W RGI2P40188 164 aa2.41□□□□□ -2.02
CBF2YGR140W LTP1P40347 161 aa2.41□□□□□ -2.02
CBF2YGR140W ROK1P45818 564 aaPredicted RBP2.41□□□□□ -2.02
CBF2YGR140W LCL3P53153 274 aa2.41□□□□□ -2.02
CBF2YGR140W BUD9P53226 547 aa2.41□□□□□ -2.02
CBF2YGR140W YGR250CP53316 781 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W YNL144CP53907 740 aa2.41□□□□□ -2.02
CBF2YGR140W MUB1Q03162 620 aa2.41□□□□□ -2.02
CBF2YGR140W CRF1Q04930 467 aa2.41□□□□□ -2.02
CBF2YGR140W YLR456WQ06199 204 aa2.41□□□□□ -2.02
CBF2YGR140W AIM6Q07716 390 aa2.41□□□□□ -2.02
CBF2YGR140W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
CBF2YGR140W ATG29Q12092 213 aa2.41□□□□□ -2.02
CBF2YGR140W AI1P03875 834 aa2.41□□□□□ -2.02
CBF2YGR140W CLC1P17891 233 aa2.41□□□□□ -2.02
CBF2YGR140W VPS33P20795 691 aa2.41□□□□□ -2.02
CBF2YGR140W VPS34P22543 875 aa2.41□□□□□ -2.02
CBF2YGR140W GRR1P24814 1151 aa2.41□□□□□ -2.02
CBF2YGR140W YIH1P25637 258 aa2.41□□□□□ -2.02
CBF2YGR140W PRE2P30656 287 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W MET22P32179 357 aa2.41□□□□□ -2.02
CBF2YGR140W RRP1P35178 278 aaPredicted RBP2.41□□□□□ -2.02
CBF2YGR140W TOS1P38288 455 aa2.41□□□□□ -2.02
CBF2YGR140W CRG1P38892 291 aaRIP-Chip data2.41□□□□□ -2.02not detected
CBF2YGR140W MSS4P38994 779 aa2.41□□□□□ -2.02
CBF2YGR140W PSD1P39006 500 aa2.41□□□□□ -2.02
CBF2YGR140W FUN12P39730 1002 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W MAF1P41910 395 aa2.41□□□□□ -2.02
CBF2YGR140W CTR1P49573 406 aa2.41□□□□□ -2.02
CBF2YGR140W TAM41P53230 385 aa2.41□□□□□ -2.02
CBF2YGR140W PIL1P53252 339 aaKnown RBP2.41□□□□□ -2.02
CBF2YGR140W YPL107WQ02873 248 aa2.41□□□□□ -2.02
CBF2YGR140W STP3Q05937 343 aa2.41□□□□□ -2.02
CBF2YGR140W YLR345WQ06137 509 aa2.41□□□□□ -2.02
CBF2YGR140W FMP45Q07651 309 aa2.41□□□□□ -2.02
CBF2YGR140W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
CBF2YGR140W REX3Q12090 404 aa2.41□□□□□ -2.02
CBF2YGR140W THR1P17423 357 aaKnown RBP2.4□□□□□ -2.02
CBF2YGR140W SPB1P25582 841 aaPredicted RBP2.4□□□□□ -2.02
CBF2YGR140W SIP1P32578 815 aa2.4□□□□□ -2.02
CBF2YGR140W AUR1P36107 401 aaPredicted RBP2.4□□□□□ -2.02
CBF2YGR140W SAF1P38352 637 aa2.4□□□□□ -2.02
CBF2YGR140W ACO2P39533 789 aa2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms