RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeast

Gene PEX4, Length 552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX4	YGR133W	RDS1	P25611	832 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	MSH1	P25846	959 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	SWC3	P31376	625 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	ATO2	P32907	282 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	AAP1	P37898	856 aa	Known RBP	2.61	□□□□□ -1.99
PEX4	YGR133W	HSL7	P38274	827 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	MET30	P39014	640 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	YER130C	P39959	443 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	SPO22	P40511	975 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	YPT11	P48559	417 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	LYS20	P48570	428 aa	Known RBP	2.61	□□□□□ -1.99
PEX4	YGR133W	VPS4	P52917	437 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	NNF2	P53253	936 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	RTS3	P53289	263 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	BRE5	P53741	515 aa	Known RBP	2.61	□□□□□ -1.99
PEX4	YGR133W	TRM44	Q02648	567 aa	Known RBP	2.61	□□□□□ -1.99
PEX4	YGR133W	YCG1	Q06680	1035 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	PSK2	Q08217	1101 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	YOL057W	Q08225	711 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	YOL098C	Q12496	1037 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	TOM1	Q03280	3268 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	SWI1	P09547	1314 aa		2.61	□□□□□ -1.99
PEX4	YGR133W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
PEX4	YGR133W	RRP1	P35178	278 aa	Predicted RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	SWH1	P35845	1188 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	YHR020W	P38708	688 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	CAJ1	P39101	391 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	NOC2	P39744	710 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	EXO1	P39875	702 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	PSF2	P40359	213 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	APT1	P49435	187 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	YIP4	P53093	235 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	MLC1	P53141	149 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	YNL018C	P53976	612 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	SUB1	P54000	292 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	WAR1	Q03631	944 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	GRX3	Q03835	250 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	RRB1	Q04225	511 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	VMS1	Q04311	632 aa	Known RBP	2.6	□□□□□ -1.99
PEX4	YGR133W	YPL150W	Q12152	901 aa		2.6	□□□□□ -1.99
PEX4	YGR133W	HPR1	P17629	752 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	SRP54	P20424	541 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	UBC1	P21734	215 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	DPB3	P27344	201 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	GSY2	P27472	705 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	CDC15	P27636	974 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	SRP40	P32583	406 aa	Predicted RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	YEL043W	P32618	956 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	TOA1	P32773	286 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	SER1	P33330	395 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	YKT6	P36015	200 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	MAL33	P38157	468 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	BUD6	P41697	788 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	THI6	P41835	540 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	BIT61	P47041	543 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	TAN1	P53072	289 aa	Predicted RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	RNH70	P53331	553 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	VPS75	P53853	264 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	GYL1	Q04322	720 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	FLC1	Q08967	793 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	YPL225W	Q08971	146 aa	Known RBP	2.59	□□□□□ -1.99
PEX4	YGR133W	APL4	Q12028	832 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	HIF1	Q12373	385 aa		2.59	□□□□□ -1.99
PEX4	YGR133W	TOR2	P32600	2474 aa	Known RBP	2.59	□□□□□ -2
PEX4	YGR133W	CAN1	P04817	590 aa		2.58	□□□□□ -2
PEX4	YGR133W	MATALPHA2	P0CY08	210 aa		2.58	□□□□□ -2
PEX4	YGR133W	HMLALPHA2	P0CY09	210 aa		2.58	□□□□□ -2
PEX4	YGR133W	RPO26	P20435	155 aa		2.58	□□□□□ -2
PEX4	YGR133W	YCP4	P25349	247 aa	Known RBP	2.58	□□□□□ -2
PEX4	YGR133W	SWI3	P32591	825 aa		2.58	□□□□□ -2
PEX4	YGR133W	BYE1	P36106	594 aa		2.58	□□□□□ -2
PEX4	YGR133W	NUP133	P36161	1157 aa		2.58	□□□□□ -2
PEX4	YGR133W	MRPL7	P36519	292 aa		2.58	□□□□□ -2
PEX4	YGR133W	PCH2	P38126	564 aa		2.58	□□□□□ -2
PEX4	YGR133W	RFT1	P38206	574 aa	Predicted RBP	2.58	□□□□□ -2
PEX4	YGR133W	SPT8	P38915	602 aa		2.58	□□□□□ -2
PEX4	YGR133W	VID28	P40547	921 aa		2.58	□□□□□ -2
PEX4	YGR133W	YGL260W	P53056	76 aa		2.58	□□□□□ -2
PEX4	YGR133W	YGL242C	P53066	181 aa		2.58	□□□□□ -2
PEX4	YGR133W	COQ6	P53318	479 aa		2.58	□□□□□ -2
PEX4	YGR133W	MAL13	P53338	473 aa		2.58	□□□□□ -2
PEX4	YGR133W	ZDS2	P54786	942 aa		2.58	□□□□□ -2
PEX4	YGR133W	DNM1	P54861	757 aa		2.58	□□□□□ -2
PEX4	YGR133W	RMT2	Q03305	412 aa		2.58	□□□□□ -2
PEX4	YGR133W	TLG1	Q03322	224 aa		2.58	□□□□□ -2
PEX4	YGR133W	ATG23	Q06671	453 aa		2.58	□□□□□ -2
PEX4	YGR133W	RUD3	Q12234	484 aa	Known RBP	2.58	□□□□□ -2
PEX4	YGR133W	RDL1	Q12305	139 aa	Known RBP	2.58	□□□□□ -2
PEX4	YGR133W	SEC39	Q12745	709 aa		2.58	□□□□□ -2
PEX4	YGR133W	YPT1	P01123	206 aa	Known RBP	2.57	□□□□□ -2
PEX4	YGR133W	ARD1	P07347	238 aa	Predicted RBP	2.57	□□□□□ -2
PEX4	YGR133W	PGI1	P12709	554 aa	Known RBP	2.57	□□□□□ -2
PEX4	YGR133W	PHO13	P19881	312 aa		2.57	□□□□□ -2
PEX4	YGR133W	KIN82	P25341	720 aa		2.57	□□□□□ -2
PEX4	YGR133W	RRP43	P25359	394 aa	Predicted RBP	2.57	□□□□□ -2
PEX4	YGR133W	PPG1	P32838	368 aa		2.57	□□□□□ -2
PEX4	YGR133W	NFU1	P32860	256 aa		2.57	□□□□□ -2
PEX4	YGR133W	YPT7	P32939	208 aa		2.57	□□□□□ -2
PEX4	YGR133W	STO1	P34160	861 aa	Known RBP	2.57	□□□□□ -2
PEX4	YGR133W	RRP14	P36080	434 aa	Known RBP	2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms