RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W RSM25P40496 264 aa6.7□□□□□ -1.34
MSP1YGR028W MND1P53102 219 aa6.7□□□□□ -1.34
MSP1YGR028W SNO2P53823 222 aa6.7□□□□□ -1.34
MSP1YGR028W IMP4P53941 290 aaKnown RBP6.7□□□□□ -1.34
MSP1YGR028W SSL2Q00578 843 aa6.7□□□□□ -1.34
MSP1YGR028W ARO80Q04052 950 aa6.7□□□□□ -1.34
MSP1YGR028W SEG1Q04279 960 aa6.7□□□□□ -1.34
MSP1YGR028W SVS1Q12254 260 aa6.7□□□□□ -1.34
MSP1YGR028W AIM44Q99299 758 aa6.7□□□□□ -1.34
MSP1YGR028W KIN2P13186 1147 aaKnown RBP6.69□□□□□ -1.34
MSP1YGR028W PRI2P20457 528 aa6.69□□□□□ -1.34
MSP1YGR028W NIP100P33420 868 aa6.69□□□□□ -1.34
MSP1YGR028W SPF1P39986 1215 aaKnown RBP6.69□□□□□ -1.34
MSP1YGR028W DOT6P40059 670 aaKnown RBP6.69□□□□□ -1.34
MSP1YGR028W RMD8P43620 662 aa6.69□□□□□ -1.34
MSP1YGR028W HFM1P51979 1187 aa6.69□□□□□ -1.34
MSP1YGR028W NMA2P53204 395 aa6.69□□□□□ -1.34
MSP1YGR028W COQ6P53318 479 aa6.69□□□□□ -1.34
MSP1YGR028W YNL144CP53907 740 aa6.69□□□□□ -1.34
MSP1YGR028W SPG3Q04398 127 aaPredicted RBP6.69□□□□□ -1.34
MSP1YGR028W MFB1Q04922 465 aa6.69□□□□□ -1.34
MSP1YGR028W YML053CQ04978 212 aa6.69□□□□□ -1.34
MSP1YGR028W TDA5Q06417 326 aaKnown RBP6.69□□□□□ -1.34
MSP1YGR028W MDM38Q08179 573 aa6.69□□□□□ -1.34
MSP1YGR028W EMP46Q12396 444 aa6.69□□□□□ -1.34
MSP1YGR028W YOL098CQ12496 1037 aa6.69□□□□□ -1.34
MSP1YGR028W MPD2Q99316 277 aa6.69□□□□□ -1.34
MSP1YGR028W JIP3O13555 125 aa6.68□□□□□ -1.34
MSP1YGR028W CDC33P07260 213 aaKnown RBP6.68□□□□□ -1.34
MSP1YGR028W PPR1P07272 904 aaPredicted RBP6.68□□□□□ -1.34
MSP1YGR028W HOM2P13663 365 aaKnown RBP6.68□□□□□ -1.34
MSP1YGR028W DBP2P24783 546 aaKnown RBP6.68□□□□□ -1.34
MSP1YGR028W GPI10P30777 616 aa6.68□□□□□ -1.34
MSP1YGR028W ABZ1P37254 787 aaPredicted RBP6.68□□□□□ -1.34
MSP1YGR028W EFM2P38347 419 aa6.68□□□□□ -1.34
MSP1YGR028W FMO1P38866 432 aa6.68□□□□□ -1.34
MSP1YGR028W UFE1P41834 346 aa6.68□□□□□ -1.34
MSP1YGR028W YFL054CP43549 646 aa6.68□□□□□ -1.34
MSP1YGR028W STU2P46675 888 aa6.68□□□□□ -1.34
MSP1YGR028W DIS3Q08162 1001 aaKnown RBP6.68□□□□□ -1.34
MSP1YGR028W YOR352WQ08816 343 aa6.68□□□□□ -1.34
MSP1YGR028W MSB2P32334 1306 aa6.68□□□□□ -1.34
MSP1YGR028W SEC65P29478 273 aa6.67□□□□□ -1.34
MSP1YGR028W TRZ1P36159 838 aaPredicted RBP6.67□□□□□ -1.34
MSP1YGR028W YBR053CP38235 358 aa6.67□□□□□ -1.34
MSP1YGR028W IRR1P40541 1150 aa6.67□□□□□ -1.34
MSP1YGR028W ERG10P41338 398 aaKnown RBP6.67□□□□□ -1.34
MSP1YGR028W YJL049WP47048 450 aa6.67□□□□□ -1.34
MSP1YGR028W MRPL22P53881 309 aa6.67□□□□□ -1.34
MSP1YGR028W TOF2Q02208 771 aa6.67□□□□□ -1.34
MSP1YGR028W SRP1Q02821 542 aaKnown RBP6.67□□□□□ -1.34
MSP1YGR028W PIR3Q03180 325 aa6.67□□□□□ -1.34
MSP1YGR028W ESC2Q06340 456 aa6.67□□□□□ -1.34
MSP1YGR028W LAA1P39526 2014 aa6.67□□□□□ -1.34
MSP1YGR028W BEM2P39960 2167 aaKnown RBP6.67□□□□□ -1.34
MSP1YGR028W KIN3P22209 435 aa6.66□□□□□ -1.34
MSP1YGR028W CAP1P28495 268 aaKnown RBP6.66□□□□□ -1.34
MSP1YGR028W MSP1P28737 362 aa6.66□□□□□ -1.34
MSP1YGR028W RPN12P32496 274 aa6.66□□□□□ -1.34
MSP1YGR028W YMC2P38087 329 aa6.66□□□□□ -1.34
MSP1YGR028W ATG12P38316 186 aa6.66□□□□□ -1.34
MSP1YGR028W TIF5P38431 405 aaKnown RBP6.66□□□□□ -1.34
MSP1YGR028W IRC24P40580 263 aa6.66□□□□□ -1.34
MSP1YGR028W PHO86P46956 311 aa6.66□□□□□ -1.34
MSP1YGR028W TAD1P53065 400 aa6.66□□□□□ -1.34
MSP1YGR028W TAF9Q05027 157 aa6.66□□□□□ -1.34
MSP1YGR028W YPR078CQ06813 372 aa6.66□□□□□ -1.34
MSP1YGR028W SIL1Q08199 421 aa6.66□□□□□ -1.34
MSP1YGR028W LCB4Q12246 624 aa6.66□□□□□ -1.34
MSP1YGR028W YDL177CQ12257 170 aa6.66□□□□□ -1.34
MSP1YGR028W ARP7Q12406 477 aa6.66□□□□□ -1.34
MSP1YGR028W IRA2P19158 3079 aa6.65□□□□□ -1.34
MSP1YGR028W BI4P03879 638 aa6.65□□□□□ -1.34
MSP1YGR028W PAB1P04147 577 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34 RIP-Chip
MSP1YGR028W HSF1P10961 833 aa6.65□□□□□ -1.34
MSP1YGR028W REV1P12689 985 aa6.65□□□□□ -1.34
MSP1YGR028W TUP1P16649 713 aa6.65□□□□□ -1.34
MSP1YGR028W KAR3P17119 729 aa6.65□□□□□ -1.34
MSP1YGR028W YKL069WP36088 180 aa6.65□□□□□ -1.34
MSP1YGR028W KTR4P38131 464 aa6.65□□□□□ -1.34
MSP1YGR028W ECM13P38195 257 aa6.65□□□□□ -1.34
MSP1YGR028W GIP4P39732 760 aa6.65□□□□□ -1.34
MSP1YGR028W UBP7P40453 1071 aa6.65□□□□□ -1.34
MSP1YGR028W VEL1P53058 206 aa6.65□□□□□ -1.34
MSP1YGR028W ESBP6P53918 673 aa6.65□□□□□ -1.34
MSP1YGR028W YCG1Q06680 1035 aa6.65□□□□□ -1.34
MSP1YGR028W MSF1P08425 469 aa6.64□□□□□ -1.35
MSP1YGR028W AEP2P22136 580 aa6.64□□□□□ -1.35
MSP1YGR028W GAS1P22146 559 aaKnown RBP6.64□□□□□ -1.35
MSP1YGR028W MRP4P32902 394 aa6.64□□□□□ -1.35
MSP1YGR028W HSL7P38274 827 aa6.64□□□□□ -1.35
MSP1YGR028W URA8P38627 578 aaPredicted RBP6.64□□□□□ -1.35
MSP1YGR028W SDS3P40505 327 aa6.64□□□□□ -1.35
MSP1YGR028W TRM112P53738 135 aaPredicted RBP6.64□□□□□ -1.35
MSP1YGR028W INA17Q02888 182 aa6.64□□□□□ -1.35
MSP1YGR028W NAN1Q02931 896 aaKnown RBP6.64□□□□□ -1.35
MSP1YGR028W SIZ1Q04195 904 aa6.64□□□□□ -1.35
MSP1YGR028W FLC1Q08967 793 aa6.64□□□□□ -1.35
MSP1YGR028W RPS9AO13516 197 aaKnown RBP6.63□□□□□ -1.35
MSP1YGR028W SRB2P34162 210 aa6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms