RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W STE14P32584 239 aa6.94□□□□□ -1.3
SNU71YGR013W RRF1P38771 230 aa6.94□□□□□ -1.3
SNU71YGR013W MSS4P38994 779 aa6.94□□□□□ -1.3
SNU71YGR013W ACO2P39533 789 aa6.94□□□□□ -1.3
SNU71YGR013W GDI1P39958 451 aaKnown RBP6.94□□□□□ -1.3
SNU71YGR013W FTR1P40088 404 aa6.94□□□□□ -1.3
SNU71YGR013W OYE3P41816 400 aaPredicted RBP6.94□□□□□ -1.3
SNU71YGR013W CIT3P43635 486 aa6.94□□□□□ -1.3
SNU71YGR013W ZAP1P47043 880 aa6.94□□□□□ -1.3
SNU71YGR013W VPS4P52917 437 aa6.94□□□□□ -1.3
SNU71YGR013W PEX25Q02969 394 aa6.94□□□□□ -1.3
SNU71YGR013W ERB1Q04660 807 aaKnown RBP6.94□□□□□ -1.3
SNU71YGR013W ECM22Q05958 814 aaPredicted RBP6.94□□□□□ -1.3
SNU71YGR013W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SNU71YGR013W PDH1Q12428 516 aaKnown RBP6.94□□□□□ -1.3
SNU71YGR013W ATP2P00830 511 aaKnown RBP6.94□□□□□ -1.3
SNU71YGR013W RNR1P21524 888 aaKnown RBP6.94□□□□□ -1.3
SNU71YGR013W RRP7P25368 297 aaPredicted RBP6.94□□□□□ -1.3
SNU71YGR013W PRP45P28004 379 aaPredicted RBP6.94□□□□□ -1.3
SNU71YGR013W ATG19P35193 415 aa6.94□□□□□ -1.3
SNU71YGR013W EHT1P38295 451 aa6.94□□□□□ -1.3
SNU71YGR013W MND2P40577 368 aa6.94□□□□□ -1.3
SNU71YGR013W GTS1P40956 396 aa6.94□□□□□ -1.3
SNU71YGR013W TAM41P53230 385 aa6.94□□□□□ -1.3
SNU71YGR013W SPO1P53541 631 aa6.94□□□□□ -1.3
SNU71YGR013W ESC8Q08119 714 aa6.94□□□□□ -1.3
SNU71YGR013W TRE1Q08919 783 aa6.94□□□□□ -1.3
SNU71YGR013W NFI1Q12216 726 aa6.94□□□□□ -1.3
SNU71YGR013W ECM3Q99252 613 aa6.94□□□□□ -1.3
SNU71YGR013W YLR415CO13578 112 aa6.93□□□□□ -1.3
SNU71YGR013W ERG6P25087 383 aaKnown RBP6.93□□□□□ -1.3
SNU71YGR013W STB6P36085 766 aa6.93□□□□□ -1.3
SNU71YGR013W UBP13P38187 747 aa6.93□□□□□ -1.3
SNU71YGR013W SIC1P38634 284 aa6.93□□□□□ -1.3
SNU71YGR013W NOP9P47077 666 aaKnown RBP6.93□□□□□ -1.3
SNU71YGR013W ART5P53244 586 aaKnown RBP6.93□□□□□ -1.3
SNU71YGR013W RCM1P53972 490 aa6.93□□□□□ -1.3
SNU71YGR013W GCR2Q01722 534 aa6.93□□□□□ -1.3
SNU71YGR013W SKG3Q06315 1026 aa6.93□□□□□ -1.3
SNU71YGR013W TGL5Q12043 749 aa6.93□□□□□ -1.3
SNU71YGR013W TUB3P09734 445 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W TUP1P16649 713 aa6.92□□□□□ -1.3
SNU71YGR013W TRX1P22217 103 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W DEF1P35732 738 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W ALY1P36117 915 aa6.92□□□□□ -1.3
SNU71YGR013W PTC7P38797 343 aa6.92□□□□□ -1.3
SNU71YGR013W OAZ1Q02803 292 aa6.92□□□□□ -1.3
SNU71YGR013W TMA16Q08687 178 aa6.92□□□□□ -1.3
SNU71YGR013W VCX1Q99385 411 aa6.92□□□□□ -1.3
SNU71YGR013W VMA2P16140 517 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W GLK1P17709 500 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W PRE8P23639 250 aa6.92□□□□□ -1.3
SNU71YGR013W PRE2P30656 287 aaKnown RBP6.92□□□□□ -1.3
SNU71YGR013W SMF1P38925 575 aa6.92□□□□□ -1.3
SNU71YGR013W LYS9P38999 446 aa6.92□□□□□ -1.3
SNU71YGR013W MET18P40469 1032 aa6.92□□□□□ -1.3
SNU71YGR013W AAD10P47182 288 aa6.92□□□□□ -1.3
SNU71YGR013W BUD9P53226 547 aa6.92□□□□□ -1.3
SNU71YGR013W SOD2P00447 233 aa6.91□□□□□ -1.3
SNU71YGR013W RPS9BP05755 195 aaKnown RBP6.91□□□□□ -1.3
SNU71YGR013W PWP1P21304 576 aaKnown RBP6.91□□□□□ -1.3
SNU71YGR013W SED4P25365 1065 aa6.91□□□□□ -1.3
SNU71YGR013W YBR259WP38338 688 aa6.91□□□□□ -1.3
SNU71YGR013W MPT5P39016 859 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
SNU71YGR013W RGI2P40188 164 aa6.91□□□□□ -1.3
SNU71YGR013W MDE1P47095 244 aa6.91□□□□□ -1.3
SNU71YGR013W JJJ1P53863 590 aa6.91□□□□□ -1.3
SNU71YGR013W HOT1Q03213 719 aa6.91□□□□□ -1.3
SNU71YGR013W NGL2Q03264 515 aaKnown RBP6.91□□□□□ -1.3
SNU71YGR013W STP3Q05937 343 aa6.91□□□□□ -1.3
SNU71YGR013W POM34Q12445 299 aa6.91□□□□□ -1.3
SNU71YGR013W STF1P01098 86 aa6.9□□□□□ -1.3
SNU71YGR013W CTT1P06115 562 aa6.9□□□□□ -1.3
SNU71YGR013W KIN82P25341 720 aa6.9□□□□□ -1.3
SNU71YGR013W PUP2P32379 260 aa6.9□□□□□ -1.3
SNU71YGR013W APT2P36973 181 aa6.9□□□□□ -1.3
SNU71YGR013W RFC1P38630 861 aaKnown RBP6.9□□□□□ -1.3
SNU71YGR013W URM1P40554 99 aaPredicted RBP6.9□□□□□ -1.3
SNU71YGR013W JJJ3P47138 172 aa6.9□□□□□ -1.3
SNU71YGR013W INN1P53901 409 aa6.9□□□□□ -1.3
SNU71YGR013W PKH1Q03407 766 aa6.9□□□□□ -1.3
SNU71YGR013W YDR444WQ04093 687 aa6.9□□□□□ -1.3
SNU71YGR013W GYL1Q04322 720 aa6.9□□□□□ -1.3
SNU71YGR013W RIX7Q07844 837 aaKnown RBP6.9□□□□□ -1.3
SNU71YGR013W AIM41Q12032 185 aa6.9□□□□□ -1.3
SNU71YGR013W TUF1P02992 437 aaKnown RBP6.9□□□□□ -1.31
SNU71YGR013W THR1P17423 357 aaKnown RBP6.9□□□□□ -1.31
SNU71YGR013W CLB1P24868 471 aa6.9□□□□□ -1.31
SNU71YGR013W MET22P32179 357 aa6.9□□□□□ -1.31
SNU71YGR013W TDP1P38319 544 aa6.9□□□□□ -1.31
SNU71YGR013W ECM1P39715 212 aa6.9□□□□□ -1.31
SNU71YGR013W JHD1P40034 492 aa6.9□□□□□ -1.31
SNU71YGR013W GLO1P50107 326 aa6.9□□□□□ -1.31
SNU71YGR013W BNI5P53890 448 aaKnown RBP6.9□□□□□ -1.31
SNU71YGR013W KEL3Q08979 651 aaPredicted RBP6.9□□□□□ -1.31
SNU71YGR013W REX3Q12090 404 aa6.9□□□□□ -1.31
SNU71YGR013W FRE6Q12473 712 aa6.9□□□□□ -1.31
SNU71YGR013W AI3P03877 415 aa6.89□□□□□ -1.31
SNU71YGR013W CHS2P14180 963 aa6.89□□□□□ -1.31
SNU71YGR013W RTS1P38903 757 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms