RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	YPL113C	Q02961	396 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	TY1A-DR2	Q03964	440 aa	Known RBP	4.38	□□□□□ -1.71
YGL088W	YGL088W	RTN1	Q04947	295 aa	Known RBP	4.38	□□□□□ -1.71
YGL088W	YGL088W	HRQ1	Q05549	1077 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	YLR125W	Q12138	136 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	MCD1	Q12158	566 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	YRA1	Q12159	226 aa	Known RBP	4.38	□□□□□ -1.71
YGL088W	YGL088W	YPR053C	Q6Q5F3	151 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	TSC13	Q99190	310 aa		4.38	□□□□□ -1.71
YGL088W	YGL088W	RPC40	P07703	335 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	RPB2	P08518	1224 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	HAP4	P14064	554 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	EFB1	P32471	206 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	GCD6	P32501	712 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	HSP78	P33416	811 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	SIC1	P38634	284 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	SKN7	P38889	622 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	ELO1	P39540	310 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	RSM25	P40496	264 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	KTR7	P40504	517 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	MNT3	P40549	630 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	GPP1	P41277	250 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	ACS2	P52910	683 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	EFM5	P53200	248 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	SDA1	P53313	767 aa	Known RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	PGA2	P53903	129 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	COG6	P53959	839 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	ERV41	Q04651	352 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	ECM22	Q05958	814 aa	Predicted RBP	4.37	□□□□□ -1.71
YGL088W	YGL088W	REH1	Q06709	432 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	MDM36	Q06820	579 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	RTT10	Q08924	1013 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	MED1	Q12321	566 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	SMC6	Q12749	1114 aa		4.37	□□□□□ -1.71
YGL088W	YGL088W	STF1	P01098	86 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	CYT1	P07143	309 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ASP3-2	P0CX77	362 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ASP3-3	P0CX78	362 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ASP3-4	P0CX79	362 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ASP3-1	P0CZ17	362 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	SBP1	P10080	294 aa	Known RBP	4.36	□□□□□ -1.71
YGL088W	YGL088W	THR4	P16120	514 aa	Known RBP	4.36	□□□□□ -1.71
YGL088W	YGL088W	PDC5	P16467	563 aa	Known RBP	4.36	□□□□□ -1.71
YGL088W	YGL088W	YCK2	P23292	546 aa	Known RBP	4.36	□□□□□ -1.71
YGL088W	YGL088W	RIB7	P33312	244 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	PTH2	P34222	208 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	YIL166C	P40445	542 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	CIS3	P47001	227 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	YJR120W	P47157	116 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ORC5	P50874	479 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	VHS1	Q03785	461 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	SIZ1	Q04195	904 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	ATG26	Q06321	1198 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	YOR352W	Q08816	343 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	NAG1	Q8TGN9	163 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	Q0182	Q9ZZW1	134 aa		4.36	□□□□□ -1.71
YGL088W	YGL088W	PYC1	P11154	1178 aa	Known RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	SST2	P11972	698 aa	Known RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	ARF2	P19146	181 aa	Known RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	REC107	P21651	314 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	NAM7	P30771	971 aa	Known RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	THI4	P32318	326 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ACP1	P32463	125 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
YGL088W	YGL088W	YKL151C	P36059	337 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	TRZ1	P36159	838 aa	Predicted RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	MCX1	P38323	520 aa	Predicted RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	ERC1	P38767	581 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	LAM1	P38851	1228 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	SPT8	P38915	602 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	SPC72	P39723	622 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	RAD26	P40352	1085 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	YIL092W	P40497	633 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ULP2	P40537	1034 aa	Predicted RBP	4.35	□□□□□ -1.71
YGL088W	YGL088W	RET2	P43621	546 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ASG7	P46993	209 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	RET3	P53600	189 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	HST1	P53685	503 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ARP4	P80428	489 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	YML131W	Q03102	365 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	GAD1	Q04792	585 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ARR1	Q06596	294 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	ARR2	Q06597	130 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	RSC58	Q07979	502 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	YOL073C	Q08232	322 aa		4.35	□□□□□ -1.71
YGL088W	YGL088W	KNS1	P32350	737 aa	Predicted RBP	4.34	□□□□□ -1.71
YGL088W	YGL088W	DPH5	P32469	300 aa	Predicted RBP	4.34	□□□□□ -1.71
YGL088W	YGL088W	UBP13	P38187	747 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	TAT2	P38967	592 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	PCL7	P40186	285 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	TMA108	P40462	946 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	YIL108W	P40483	696 aa	Known RBP	4.34	□□□□□ -1.71
YGL088W	YGL088W	SER33	P40510	469 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	AGX1	P43567	385 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	GUF1	P46943	645 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	HLJ1	P48353	224 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	ASN1	P49089	572 aa	Known RBP	4.34	□□□□□ -1.71
YGL088W	YGL088W	MTO1	P53070	669 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	RTC4	P53850	401 aa		4.34	□□□□□ -1.71
YGL088W	YGL088W	TGL2	P54857	326 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms