RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C GRX6Q12438 231 aa4.35□□□□□ -1.71
SPB4YFL002C KAR3P17119 729 aa4.34□□□□□ -1.71
SPB4YFL002C TPM1P17536 199 aaKnown RBP4.34□□□□□ -1.71
SPB4YFL002C EFT1P32324 842 aaKnown RBP4.34□□□□□ -1.71
SPB4YFL002C RTS1P38903 757 aa4.34□□□□□ -1.71
SPB4YFL002C RGI2P40188 164 aa4.34□□□□□ -1.71
SPB4YFL002C STP3Q05937 343 aa4.34□□□□□ -1.71
SPB4YFL002C ISA2Q12425 185 aa4.34□□□□□ -1.71
SPB4YFL002C SPT7P35177 1332 aa4.34□□□□□ -1.72
SPB4YFL002C PMS1P14242 873 aa4.33□□□□□ -1.72
SPB4YFL002C PWP1P21304 576 aaKnown RBP4.33□□□□□ -1.72
SPB4YFL002C KRR1P25586 316 aaPredicted RBP4.33□□□□□ -1.72
SPB4YFL002C NTH1P32356 751 aa4.33□□□□□ -1.72
SPB4YFL002C YKL100CP34248 587 aa4.33□□□□□ -1.72
SPB4YFL002C UBP13P38187 747 aa4.33□□□□□ -1.72
SPB4YFL002C GLO1P50107 326 aa4.33□□□□□ -1.72
SPB4YFL002C NNF2P53253 936 aa4.33□□□□□ -1.72
SPB4YFL002C YNR061CP53747 219 aa4.33□□□□□ -1.72
SPB4YFL002C RMT2Q03305 412 aa4.33□□□□□ -1.72
SPB4YFL002C YDR132CQ03900 495 aa4.33□□□□□ -1.72
SPB4YFL002C CRF1Q04930 467 aa4.33□□□□□ -1.72
SPB4YFL002C YLR345WQ06137 509 aa4.33□□□□□ -1.72
SPB4YFL002C RIX7Q07844 837 aaKnown RBP4.33□□□□□ -1.72
SPB4YFL002C ENB1Q08299 606 aa4.33□□□□□ -1.72
SPB4YFL002C SWT1Q12104 458 aa4.33□□□□□ -1.72
SPB4YFL002C LYS21Q12122 440 aaKnown RBP4.33□□□□□ -1.72
SPB4YFL002C GET3Q12154 354 aaKnown RBP4.33□□□□□ -1.72
SPB4YFL002C CAP1P28495 268 aaKnown RBP4.32□□□□□ -1.72
SPB4YFL002C MVD1P32377 396 aaKnown RBP4.32□□□□□ -1.72
SPB4YFL002C KTR3P38130 404 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C YJL206CP39529 758 aa4.32□□□□□ -1.72
SPB4YFL002C YEL057CP39983 233 aa4.32□□□□□ -1.72
SPB4YFL002C LTP1P40347 161 aa4.32□□□□□ -1.72
SPB4YFL002C ROK1P45818 564 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C ATG23Q06671 453 aa4.32□□□□□ -1.72
SPB4YFL002C IZH3Q07959 543 aa4.32□□□□□ -1.72
SPB4YFL002C MED7Q08278 222 aa4.32□□□□□ -1.72
SPB4YFL002C FRE5Q08908 694 aa4.32□□□□□ -1.72
SPB4YFL002C CET1O13297 549 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C SES1P07284 462 aaKnown RBP4.32□□□□□ -1.72
SPB4YFL002C ADK2P26364 225 aa4.32□□□□□ -1.72
SPB4YFL002C AUR1P36107 401 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C SRO77P38163 1010 aa4.32□□□□□ -1.72
SPB4YFL002C YBR053CP38235 358 aa4.32□□□□□ -1.72
SPB4YFL002C JHD1P40034 492 aa4.32□□□□□ -1.72
SPB4YFL002C MET18P40469 1032 aa4.32□□□□□ -1.72
SPB4YFL002C MPS3P47069 682 aa4.32□□□□□ -1.72
SPB4YFL002C ATP22P50273 684 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C MUP1P50276 574 aa4.32□□□□□ -1.72
SPB4YFL002C MRPL22P53881 309 aa4.32□□□□□ -1.72
SPB4YFL002C DLT1Q04216 342 aa4.32□□□□□ -1.72
SPB4YFL002C ECM22Q05958 814 aaPredicted RBP4.32□□□□□ -1.72
SPB4YFL002C CPA2P03965 1118 aaKnown RBP4.31□□□□□ -1.72
SPB4YFL002C TRP4P07285 380 aaPredicted RBP4.31□□□□□ -1.72
SPB4YFL002C DPH2P32461 534 aa4.31□□□□□ -1.72
SPB4YFL002C YKR073CP36153 106 aa4.31□□□□□ -1.72
SPB4YFL002C MRPL7P36519 292 aa4.31□□□□□ -1.72
SPB4YFL002C MAL33P38157 468 aa4.31□□□□□ -1.72
SPB4YFL002C SDH8P38345 138 aa4.31□□□□□ -1.72
SPB4YFL002C SMF1P38925 575 aa4.31□□□□□ -1.72
SPB4YFL002C MET28P40573 187 aa4.31□□□□□ -1.72
SPB4YFL002C UBC11P52492 156 aa4.31□□□□□ -1.72
SPB4YFL002C JJJ1P53863 590 aa4.31□□□□□ -1.72
SPB4YFL002C CIK1Q01649 594 aa4.31□□□□□ -1.72
SPB4YFL002C YML119WQ03208 357 aa4.31□□□□□ -1.72
SPB4YFL002C EFR3Q03653 782 aaKnown RBP4.31□□□□□ -1.72
SPB4YFL002C GTB1Q04924 702 aa4.31□□□□□ -1.72
SPB4YFL002C TCO89Q08921 799 aa4.31□□□□□ -1.72
SPB4YFL002C YOL159C-AQ3E769 90 aa4.31□□□□□ -1.72
SPB4YFL002C YBR255C-AQ3E776 120 aa4.31□□□□□ -1.72
SPB4YFL002C YML003WP0CF16 290 aa4.3□□□□□ -1.72
SPB4YFL002C CAF20P12962 161 aaKnown RBP4.3□□□□□ -1.72
SPB4YFL002C DAL5P15365 543 aa4.3□□□□□ -1.72
SPB4YFL002C LRE1P25579 583 aaKnown RBP4.3□□□□□ -1.72
SPB4YFL002C POL4P25615 582 aa4.3□□□□□ -1.72
SPB4YFL002C KES1P35844 434 aaKnown RBP4.3□□□□□ -1.72
SPB4YFL002C CTP1P38152 299 aa4.3□□□□□ -1.72
SPB4YFL002C REG2P38232 338 aa4.3□□□□□ -1.72
SPB4YFL002C RXT2P38255 430 aa4.3□□□□□ -1.72
SPB4YFL002C HRB1P38922 454 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SPB4YFL002C IME4P41833 600 aa4.3□□□□□ -1.72
SPB4YFL002C BTN2P53286 410 aa4.3□□□□□ -1.72
SPB4YFL002C YDR286CQ05530 114 aa4.3□□□□□ -1.72
SPB4YFL002C YEH1Q07804 573 aa4.3□□□□□ -1.72
SPB4YFL002C LAS17Q12446 633 aa4.3□□□□□ -1.72
SPB4YFL002C YJR112W-AQ3E743 109 aa4.3□□□□□ -1.72
SPB4YFL002C YOR019WQ99248 730 aa4.3□□□□□ -1.72
SPB4YFL002C MET3P08536 511 aa4.3□□□□□ -1.72
SPB4YFL002C STE50P25344 346 aa4.3□□□□□ -1.72
SPB4YFL002C SRB5P32585 307 aa4.3□□□□□ -1.72
SPB4YFL002C SAS3P34218 831 aa4.3□□□□□ -1.72
SPB4YFL002C GCS1P35197 352 aa4.3□□□□□ -1.72
SPB4YFL002C UBP11P36026 717 aa4.3□□□□□ -1.72
SPB4YFL002C REV7P38927 245 aa4.3□□□□□ -1.72
SPB4YFL002C SGF73P53165 657 aa4.3□□□□□ -1.72
SPB4YFL002C IMO32P53219 342 aa4.3□□□□□ -1.72
SPB4YFL002C YGR066CP53242 292 aa4.3□□□□□ -1.72
SPB4YFL002C USA1Q03714 838 aa4.3□□□□□ -1.72
SPB4YFL002C SKG3Q06315 1026 aa4.3□□□□□ -1.72
SPB4YFL002C PGC1Q08959 321 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms